RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 SBNO2Q9Y2G9 1366 aa26.25■■□□□ 1.79
NDUFB4-204ENST00000491335 USP21Q9UK80 565 aa26.25■■□□□ 1.79
NDUFB4-204ENST00000491335 RXRBP28702 533 aa26.23■■□□□ 1.79
NDUFB4-204ENST00000491335 ABCA3Q99758 1704 aa26.22■■□□□ 1.79
NDUFB4-204ENST00000491335 ST20-MTHFSA0A0A6YYL1 179 aa26.2■■□□□ 1.78
NDUFB4-204ENST00000491335 NUTM2GQ5VZR2 741 aa26.18■■□□□ 1.78
NDUFB4-204ENST00000491335 BCL9LQ86UU0 1499 aa26.17■■□□□ 1.78
NDUFB4-204ENST00000491335 TESK2Q96S53 571 aa26.17■■□□□ 1.78
NDUFB4-204ENST00000491335 TRPC5Q9UL62 973 aaPredicted RBP26.17■■□□□ 1.78
NDUFB4-204ENST00000491335 ATAD2Q6PL18 1390 aa26.17■■□□□ 1.78
NDUFB4-204ENST00000491335 RBM6P78332 1123 aaKnown RBP26.16■■□□□ 1.78
NDUFB4-204ENST00000491335 ABTB2Q8N961 1025 aa26.16■■□□□ 1.78
NDUFB4-204ENST00000491335 FAM83GA6ND36 823 aa26.15■■□□□ 1.78
NDUFB4-204ENST00000491335 CRYBG1Q9Y4K1 1723 aa26.14■■□□□ 1.78
NDUFB4-204ENST00000491335 SLIT2O94813 1529 aa26.14■■□□□ 1.77
NDUFB4-204ENST00000491335 USP6P35125 1406 aa26.14■■□□□ 1.77
NDUFB4-204ENST00000491335 USP47Q96K76 1375 aa26.13■■□□□ 1.77
NDUFB4-204ENST00000491335 ATRNO75882 1429 aa26.13■■□□□ 1.77
NDUFB4-204ENST00000491335 BRD4O60885 1362 aaPredicted RBP26.12■■□□□ 1.77
NDUFB4-204ENST00000491335 UNC5CLQ8IV45 518 aa26.12■■□□□ 1.77
NDUFB4-204ENST00000491335 ZNF692Q9BU19 519 aaPredicted RBP26.12■■□□□ 1.77
NDUFB4-204ENST00000491335 CDK12Q9NYV4 1490 aaPredicted RBP26.1■■□□□ 1.77
NDUFB4-204ENST00000491335 AKAP12Q02952 1782 aa26.1■■□□□ 1.77
NDUFB4-204ENST00000491335 SSH2Q76I76 1423 aa26.09■■□□□ 1.77
NDUFB4-204ENST00000491335 TMC1Q8TDI8 760 aa26.09■■□□□ 1.77
NDUFB4-204ENST00000491335 PUS7Q96PZ0 661 aaKnown RBP26.09■■□□□ 1.77
NDUFB4-204ENST00000491335 PLCH1Q4KWH8 1693 aa26.09■■□□□ 1.77
NDUFB4-204ENST00000491335 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.08■■□□□ 1.77
NDUFB4-204ENST00000491335 CPSF1Q10570 1443 aaKnown RBP26.08■■□□□ 1.77
NDUFB4-204ENST00000491335 SLC24A1O60721 1099 aa26.08■■□□□ 1.77
NDUFB4-204ENST00000491335 NLRP13Q86W25 1043 aa26.08■■□□□ 1.77
NDUFB4-204ENST00000491335 PHRF1Q9P1Y6 1649 aaKnown RBP26.07■■□□□ 1.76
NDUFB4-204ENST00000491335 SLC12A5Q9H2X9 1139 aa26.07■■□□□ 1.76
NDUFB4-204ENST00000491335 NWD2Q9ULI1 1742 aa26.06■■□□□ 1.76
NDUFB4-204ENST00000491335 ZC3H6P61129 1189 aaKnown RBP26.06■■□□□ 1.76
NDUFB4-204ENST00000491335 GJD4Q96KN9 370 aaPredicted RBP26.06■■□□□ 1.76
NDUFB4-204ENST00000491335 PRDM11Q9NQV5 511 aa26.06■■□□□ 1.76
NDUFB4-204ENST00000491335 NLRP6P59044 892 aa26.05■■□□□ 1.76
NDUFB4-204ENST00000491335 USP19O94966 1318 aa26.05■■□□□ 1.76
NDUFB4-204ENST00000491335 TTC21BQ7Z4L5 1316 aa26.05■■□□□ 1.76
NDUFB4-204ENST00000491335 KTN1Q86UP2 1357 aaKnown RBP26.05■■□□□ 1.76
NDUFB4-204ENST00000491335 BTG4Q9NY30 223 aa26.04■■□□□ 1.76
NDUFB4-204ENST00000491335 COL14A1Q05707 1796 aaKnown RBP26.04■■□□□ 1.76
NDUFB4-204ENST00000491335 KIAA0232Q92628 1395 aa26.04■■□□□ 1.76
NDUFB4-204ENST00000491335 RGS12O14924 1447 aa26.04■■□□□ 1.76
NDUFB4-204ENST00000491335 TMF1P82094 1093 aa26.02■■□□□ 1.76
NDUFB4-204ENST00000491335 CHRNA2Q15822 529 aa26.02■■□□□ 1.76
NDUFB4-204ENST00000491335 VPS72Q15906 364 aa26.02■■□□□ 1.76
NDUFB4-204ENST00000491335 CD163L1Q9NR16 1453 aa26.02■■□□□ 1.76
NDUFB4-204ENST00000491335 GCP02774 474 aa26.01■■□□□ 1.75
NDUFB4-204ENST00000491335 MON2Q7Z3U7 1717 aa26■■□□□ 1.75
NDUFB4-204ENST00000491335 PIK3C2AO00443 1686 aa26■■□□□ 1.75
NDUFB4-204ENST00000491335 TTC21AQ8NDW8 1320 aa26■■□□□ 1.75
NDUFB4-204ENST00000491335 HDGFL2Q7Z4V5 671 aaPredicted RBP26■■□□□ 1.75
NDUFB4-204ENST00000491335 NRKQ7Z2Y5 1582 aa25.99■■□□□ 1.75
NDUFB4-204ENST00000491335 CCDC9Q9Y3X0 531 aaKnown RBP25.99■■□□□ 1.75
NDUFB4-204ENST00000491335 NRAPQ86VF7 1730 aa25.98■■□□□ 1.75
NDUFB4-204ENST00000491335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.98■■□□□ 1.75
NDUFB4-204ENST00000491335 TERF2IPQ9NYB0 399 aa25.98■■□□□ 1.75
NDUFB4-204ENST00000491335 GLI3P10071 1580 aa25.98■■□□□ 1.75
NDUFB4-204ENST00000491335 CPDO75976 1380 aa25.95■■□□□ 1.75
NDUFB4-204ENST00000491335 A0A1W2PP64 1363 aa25.95■■□□□ 1.74
NDUFB4-204ENST00000491335 NINLQ9Y2I6 1382 aa25.95■■□□□ 1.74
NDUFB4-204ENST00000491335 SLIT3O75094 1523 aa25.93■■□□□ 1.74
NDUFB4-204ENST00000491335 ZRANB1Q9UGI0 708 aa25.93■■□□□ 1.74
NDUFB4-204ENST00000491335 CDCA8Q53HL2 280 aa25.92■■□□□ 1.74
NDUFB4-204ENST00000491335 NME9Q86XW9 330 aa25.92■■□□□ 1.74
NDUFB4-204ENST00000491335 EDC4Q6P2E9 1401 aaKnown RBP25.91■■□□□ 1.74
NDUFB4-204ENST00000491335 ZBTB7CA1YPR0 619 aa25.91■■□□□ 1.74
NDUFB4-204ENST00000491335 EIF4G2P78344 907 aaKnown RBP eCLIP25.91■■□□□ 1.74
NDUFB4-204ENST00000491335 STRN4Q9NRL3 753 aa25.91■■□□□ 1.74
NDUFB4-204ENST00000491335 CAMTA1Q9Y6Y1 1673 aa25.9■■□□□ 1.74
NDUFB4-204ENST00000491335 SOX12O15370 315 aa25.89■■□□□ 1.74
NDUFB4-204ENST00000491335 HSPA5P11021 654 aaKnown RBP25.89■■□□□ 1.74
NDUFB4-204ENST00000491335 EVA1CP58658 441 aa25.89■■□□□ 1.74
NDUFB4-204ENST00000491335 UPF1Q92900 1129 aaKnown RBP eCLIP25.89■■□□□ 1.74
NDUFB4-204ENST00000491335 SPATA31A5Q5VU36 1347 aa25.88■■□□□ 1.73
NDUFB4-204ENST00000491335 SPATA31A7Q8IWB4 1347 aa25.88■■□□□ 1.73
NDUFB4-204ENST00000491335 USP31Q70CQ4 1352 aa25.88■■□□□ 1.73
NDUFB4-204ENST00000491335 ONECUT3O60422 494 aaPredicted RBP25.88■■□□□ 1.73
NDUFB4-204ENST00000491335 SEPT12Q8IYM1 358 aa25.88■■□□□ 1.73
NDUFB4-204ENST00000491335 KCNH5Q8NCM2 988 aa25.88■■□□□ 1.73
NDUFB4-204ENST00000491335 LMO7Q8WWI1 1683 aa25.87■■□□□ 1.73
NDUFB4-204ENST00000491335 ANKRD36BQ8N2N9 1353 aa25.85■■□□□ 1.73
NDUFB4-204ENST00000491335 FAM98CQ17RN3 349 aaKnown RBP25.85■■□□□ 1.73
NDUFB4-204ENST00000491335 ARHGEF25Q86VW2 580 aa25.85■■□□□ 1.73
NDUFB4-204ENST00000491335 AATKQ6ZMQ8 1374 aa25.84■■□□□ 1.73
NDUFB4-204ENST00000491335 BRWD3Q6RI45 1802 aa25.84■■□□□ 1.73
NDUFB4-204ENST00000491335 SPATA31A1Q5TZJ5 1347 aa25.84■■□□□ 1.73
NDUFB4-204ENST00000491335 LARP1Q6PKG0 1096 aaKnown RBP25.83■■□□□ 1.73
NDUFB4-204ENST00000491335 USP54Q70EL1 1684 aa25.83■■□□□ 1.73
NDUFB4-204ENST00000491335 COL18A1P39060 1754 aa25.82■■□□□ 1.72
NDUFB4-204ENST00000491335 A0A0G2JS52 829 aa25.81■■□□□ 1.72
NDUFB4-204ENST00000491335 MYT1Q01538 1121 aa25.81■■□□□ 1.72
NDUFB4-204ENST00000491335 NFAT5O94916 1531 aa25.81■■□□□ 1.72
NDUFB4-204ENST00000491335 USP35Q9P2H5 1018 aa25.8■■□□□ 1.72
NDUFB4-204ENST00000491335 AXIN2Q9Y2T1 843 aa25.8■■□□□ 1.72
NDUFB4-204ENST00000491335 COL5A2P05997 1499 aaPredicted RBP25.79■■□□□ 1.72
NDUFB4-204ENST00000491335 POLR3GLQ9BT43 218 aa25.79■■□□□ 1.72
NDUFB4-204ENST00000491335 MYOM1P52179 1685 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms