RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 SPATA31A7Q8IWB4 1347 aa20.31■□□□□ 0.84
CTDSP1-210ENST00000491064 DISP2A7MBM2 1401 aa20.31■□□□□ 0.84
CTDSP1-210ENST00000491064 GPRASP1Q5JY77 1395 aa20.3■□□□□ 0.84
CTDSP1-210ENST00000491064 ACIN1Q9UKV3 1341 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-210ENST00000491064 R3HDM1Q15032 1099 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-210ENST00000491064 ADGRB1O14514 1584 aa20.29■□□□□ 0.84
CTDSP1-210ENST00000491064 PRR36Q9H6K5 1346 aa20.27■□□□□ 0.84
CTDSP1-210ENST00000491064 TULP4Q9NRJ4 1543 aa20.27■□□□□ 0.84
CTDSP1-210ENST00000491064 HIRIP3Q9BW71 556 aaPredicted RBP20.27■□□□□ 0.84
CTDSP1-210ENST00000491064 EIF3AQ14152 1382 aaKnown RBP20.26■□□□□ 0.83
CTDSP1-210ENST00000491064 EZH2Q15910 746 aaKnown RBP20.25■□□□□ 0.83
CTDSP1-210ENST00000491064 MINK1Q8N4C8 1332 aaPredicted RBP20.25■□□□□ 0.83
CTDSP1-210ENST00000491064 PRDM11Q9NQV5 511 aa20.24■□□□□ 0.83
CTDSP1-210ENST00000491064 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
CTDSP1-210ENST00000491064 WASLO00401 505 aaPredicted RBP20.22■□□□□ 0.83
CTDSP1-210ENST00000491064 CAMKK2Q96RR4 588 aa20.22■□□□□ 0.83
CTDSP1-210ENST00000491064 SPATA31A1Q5TZJ5 1347 aa20.22■□□□□ 0.83
CTDSP1-210ENST00000491064 PAK3O75914 559 aaPredicted RBP20.21■□□□□ 0.83
CTDSP1-210ENST00000491064 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-210ENST00000491064 PHRF1Q9P1Y6 1649 aaKnown RBP20.2■□□□□ 0.82
CTDSP1-210ENST00000491064 TRIM37O94972 964 aa20.2■□□□□ 0.82
CTDSP1-210ENST00000491064 KIAA0232Q92628 1395 aa20.2■□□□□ 0.82
CTDSP1-210ENST00000491064 ITSN1Q15811 1721 aa20.19■□□□□ 0.82
CTDSP1-210ENST00000491064 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
CTDSP1-210ENST00000491064 RREB1Q92766 1687 aa20.18■□□□□ 0.82
CTDSP1-210ENST00000491064 PARD3Q8TEW0 1356 aa20.18■□□□□ 0.82
CTDSP1-210ENST00000491064 CHRNA2Q15822 529 aa20.17■□□□□ 0.82
CTDSP1-210ENST00000491064 ATP7BP35670 1465 aa20.17■□□□□ 0.82
CTDSP1-210ENST00000491064 STRN4Q9NRL3 753 aa20.16■□□□□ 0.82
CTDSP1-210ENST00000491064 APBA3O96018 575 aa20.15■□□□□ 0.82
CTDSP1-210ENST00000491064 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
CTDSP1-210ENST00000491064 ARHGEF28Q8N1W1 1705 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-210ENST00000491064 ZC3H6P61129 1189 aaKnown RBP20.13■□□□□ 0.81
CTDSP1-210ENST00000491064 NUDT16Q96DE0 195 aaKnown RBP20.13■□□□□ 0.81
CTDSP1-210ENST00000491064 SSH2Q76I76 1423 aa20.12■□□□□ 0.81
CTDSP1-210ENST00000491064 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
CTDSP1-210ENST00000491064 KDM2AQ9Y2K7 1162 aa20.12■□□□□ 0.81
CTDSP1-210ENST00000491064 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
CTDSP1-210ENST00000491064 NRKQ7Z2Y5 1582 aa20.1■□□□□ 0.81
CTDSP1-210ENST00000491064 PDE3BQ13370 1112 aa20.1■□□□□ 0.81
CTDSP1-210ENST00000491064 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
CTDSP1-210ENST00000491064 DCAF11Q8TEB1 546 aa20.1■□□□□ 0.81
CTDSP1-210ENST00000491064 TOPAZ1Q8N9V7 1692 aa20.1■□□□□ 0.81
CTDSP1-210ENST00000491064 LMO7Q8WWI1 1683 aa20.09■□□□□ 0.81
CTDSP1-210ENST00000491064 CAMTA1Q9Y6Y1 1673 aa20.09■□□□□ 0.81
CTDSP1-210ENST00000491064 POLR3AO14802 1390 aaPredicted RBP20.08■□□□□ 0.81
CTDSP1-210ENST00000491064 EVA1CP58658 441 aa20.08■□□□□ 0.81
CTDSP1-210ENST00000491064 YY1P25490 414 aa20.07■□□□□ 0.8
CTDSP1-210ENST00000491064 NBPF8Q3BBV2 869 aa20.07■□□□□ 0.8
CTDSP1-210ENST00000491064 NBPF14Q5TI25 921 aa20.07■□□□□ 0.8
CTDSP1-210ENST00000491064 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
CTDSP1-210ENST00000491064 RAB3GAP2Q9H2M9 1393 aa20.06■□□□□ 0.8
CTDSP1-210ENST00000491064 ACEP12821 1306 aa20.05■□□□□ 0.8
CTDSP1-210ENST00000491064 TCP11L2Q8N4U5 519 aa20.05■□□□□ 0.8
CTDSP1-210ENST00000491064 STAC3Q96MF2 364 aa20.05■□□□□ 0.8
CTDSP1-210ENST00000491064 CDK19Q9BWU1 502 aa20.05■□□□□ 0.8
CTDSP1-210ENST00000491064 CPDO75976 1380 aa20.05■□□□□ 0.8
CTDSP1-210ENST00000491064 PARP4Q9UKK3 1724 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-210ENST00000491064 USP19O94966 1318 aa20.02■□□□□ 0.8
CTDSP1-210ENST00000491064 PLEKHG3A1L390 1219 aa20.02■□□□□ 0.8
CTDSP1-210ENST00000491064 ABTB2Q8N961 1025 aa20.02■□□□□ 0.8
CTDSP1-210ENST00000491064 SPON1Q9HCB6 807 aa20.02■□□□□ 0.8
CTDSP1-210ENST00000491064 THRAP3Q9Y2W1 955 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-210ENST00000491064 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.8
CTDSP1-210ENST00000491064 COL5A2P05997 1499 aaPredicted RBP20■□□□□ 0.79
CTDSP1-210ENST00000491064 PEAK1Q9H792 1746 aa20■□□□□ 0.79
CTDSP1-210ENST00000491064 KCNQ2O43526 872 aa20■□□□□ 0.79
CTDSP1-210ENST00000491064 PPP1R1BQ9UD71 204 aaPredicted RBP20■□□□□ 0.79
CTDSP1-210ENST00000491064 RGPD3A6NKT7 1758 aaPredicted RBP20■□□□□ 0.79
CTDSP1-210ENST00000491064 RGPD4Q7Z3J3 1758 aa20■□□□□ 0.79
CTDSP1-210ENST00000491064 SBF2Q86WG5 1849 aa19.99■□□□□ 0.79
CTDSP1-210ENST00000491064 NINLQ9Y2I6 1382 aa19.98■□□□□ 0.79
CTDSP1-210ENST00000491064 C11orf95C9JLR9 678 aaPredicted RBP19.97■□□□□ 0.79
CTDSP1-210ENST00000491064 GCP02774 474 aa19.97■□□□□ 0.79
CTDSP1-210ENST00000491064 UTRNP46939 3433 aa19.97■□□□□ 0.79
CTDSP1-210ENST00000491064 OVOS2A0A0G2JMS6 1433 aa19.96■□□□□ 0.79
CTDSP1-210ENST00000491064 OVOS2A0A0J9YW53 1432 aa19.96■□□□□ 0.79
CTDSP1-210ENST00000491064 CRB1P82279 1406 aa19.96■□□□□ 0.79
CTDSP1-210ENST00000491064 OVOS2Q6IE36 1432 aa19.96■□□□□ 0.79
CTDSP1-210ENST00000491064 NLRP13Q86W25 1043 aa19.96■□□□□ 0.79
CTDSP1-210ENST00000491064 KIAA1210Q9ULL0 1709 aa19.96■□□□□ 0.79
CTDSP1-210ENST00000491064 LRRC37A3O60309 1634 aa19.95■□□□□ 0.78
CTDSP1-210ENST00000491064 CASZ1Q86V15 1759 aa19.95■□□□□ 0.78
CTDSP1-210ENST00000491064 PPIP5K1Q6PFW1 1433 aa19.93■□□□□ 0.78
CTDSP1-210ENST00000491064 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
CTDSP1-210ENST00000491064 PLSCR1O15162 318 aa19.93■□□□□ 0.78
CTDSP1-210ENST00000491064 ANO8Q9HCE9 1232 aaPredicted RBP19.92■□□□□ 0.78
CTDSP1-210ENST00000491064 WNK3Q9BYP7 1800 aa19.91■□□□□ 0.78
CTDSP1-210ENST00000491064 BRD4O60885 1362 aaPredicted RBP19.91■□□□□ 0.78
CTDSP1-210ENST00000491064 AATKQ6ZMQ8 1374 aa19.9■□□□□ 0.78
CTDSP1-210ENST00000491064 SLIT3O75094 1523 aa19.9■□□□□ 0.78
CTDSP1-210ENST00000491064 COL18A1P39060 1754 aa19.9■□□□□ 0.78
CTDSP1-210ENST00000491064 SRPK2P78362 688 aaKnown RBP19.89■□□□□ 0.77
CTDSP1-210ENST00000491064 DDB1Q16531 1140 aa19.89■□□□□ 0.77
CTDSP1-210ENST00000491064 ZBTB7CA1YPR0 619 aa19.88■□□□□ 0.77
CTDSP1-210ENST00000491064 PTF1AQ7RTS3 328 aa19.88■□□□□ 0.77
CTDSP1-210ENST00000491064 BCL11BQ9C0K0 894 aaPredicted RBP19.88■□□□□ 0.77
CTDSP1-210ENST00000491064 NBPF1Q3BBV0 1214 aa19.87■□□□□ 0.77
CTDSP1-210ENST00000491064 PDGFDQ9GZP0 370 aaPredicted RBP19.87■□□□□ 0.77
CTDSP1-210ENST00000491064 CABP2Q9NPB3 220 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms