RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRPF4B-208ENST00000490653 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.65
PRPF4B-208ENST00000490653 AHDC1Q5TGY3 1603 aaPredicted RBP11.02□□□□□ -0.65
PRPF4B-208ENST00000490653 HOXB1P14653 301 aaPredicted RBP11□□□□□ -0.65
PRPF4B-208ENST00000490653 BRINP3Q76B58 766 aa11□□□□□ -0.65
PRPF4B-208ENST00000490653 HFM1A2PYH4 1435 aa11□□□□□ -0.65
PRPF4B-208ENST00000490653 NCOA3Q9Y6Q9 1424 aa11□□□□□ -0.65
PRPF4B-208ENST00000490653 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.99□□□□□ -0.65
PRPF4B-208ENST00000490653 DOK7Q18PE1 504 aa10.99□□□□□ -0.65
PRPF4B-208ENST00000490653 AMOTL2Q9Y2J4 779 aa10.99□□□□□ -0.65
PRPF4B-208ENST00000490653 SPHKAPQ2M3C7 1700 aa10.98□□□□□ -0.65
PRPF4B-208ENST00000490653 DDX17Q92841 729 aaKnown RBP10.98□□□□□ -0.65
PRPF4B-208ENST00000490653 SPATA31A6Q5VVP1 1343 aa10.98□□□□□ -0.65
PRPF4B-208ENST00000490653 CLTCL1P53675 1640 aa10.98□□□□□ -0.65
PRPF4B-208ENST00000490653 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
PRPF4B-208ENST00000490653 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
PRPF4B-208ENST00000490653 MPHOSPH9Q99550 1183 aa10.97□□□□□ -0.65
PRPF4B-208ENST00000490653 NRXN3Q9Y4C0 1643 aa10.97□□□□□ -0.65
PRPF4B-208ENST00000490653 SHPRHQ149N8 1683 aa10.96□□□□□ -0.65
PRPF4B-208ENST00000490653 MST1RQ04912 1400 aa10.96□□□□□ -0.65
PRPF4B-208ENST00000490653 METP08581 1390 aa10.96□□□□□ -0.65
PRPF4B-208ENST00000490653 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.65
PRPF4B-208ENST00000490653 MICALL2Q8IY33 904 aa10.96□□□□□ -0.65
PRPF4B-208ENST00000490653 C19orf44Q9H6X5 657 aa10.96□□□□□ -0.65
PRPF4B-208ENST00000490653 SOX12O15370 315 aa10.95□□□□□ -0.66
PRPF4B-208ENST00000490653 ASXL1Q8IXJ9 1541 aa10.94□□□□□ -0.66
PRPF4B-208ENST00000490653 RGS12O14924 1447 aa10.94□□□□□ -0.66
PRPF4B-208ENST00000490653 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
PRPF4B-208ENST00000490653 PIK3R4Q99570 1358 aa10.94□□□□□ -0.66
PRPF4B-208ENST00000490653 TMEM92Q6UXU6 159 aa10.94□□□□□ -0.66
PRPF4B-208ENST00000490653 C14orf37Q86TY3 774 aa10.94□□□□□ -0.66
PRPF4B-208ENST00000490653 XRN1Q8IZH2 1706 aaKnown RBP10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 AFF2P51816 1311 aa10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 NUTM2BA6NNL0 878 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 NUTM2EB1AL46 878 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 RGL3Q3MIN7 710 aa10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 ZNF772Q68DY9 489 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 NUTM2AQ8IVF1 878 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 ZFP91Q96JP5 570 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 MS4A4AQ96JQ5 239 aa10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 TRPM2O94759 1503 aa10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 NEXMIFQ5QGS0 1516 aa10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
PRPF4B-208ENST00000490653 VGFO15240 615 aaPredicted RBP10.92□□□□□ -0.66
PRPF4B-208ENST00000490653 RXRBP28702 533 aa10.92□□□□□ -0.66
PRPF4B-208ENST00000490653 PNPLA6Q8IY17 1366 aa10.91□□□□□ -0.66
PRPF4B-208ENST00000490653 KIF1BO60333 1816 aa10.91□□□□□ -0.66
PRPF4B-208ENST00000490653 RIMBP2O15034 1052 aa10.91□□□□□ -0.66
PRPF4B-208ENST00000490653 DCCP43146 1447 aa10.91□□□□□ -0.66
PRPF4B-208ENST00000490653 SETBP1Q9Y6X0 1596 aa10.9□□□□□ -0.66
PRPF4B-208ENST00000490653 ERBB3P21860 1342 aa10.9□□□□□ -0.66
PRPF4B-208ENST00000490653 ADGRF5Q8IZF2 1346 aa10.9□□□□□ -0.66
PRPF4B-208ENST00000490653 ATF3P18847 181 aa10.9□□□□□ -0.66
PRPF4B-208ENST00000490653 MEX3CQ5U5Q3 659 aaKnown RBP10.9□□□□□ -0.66
PRPF4B-208ENST00000490653 NHSL1Q5SYE7 1610 aa10.9□□□□□ -0.66
PRPF4B-208ENST00000490653 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
PRPF4B-208ENST00000490653 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
PRPF4B-208ENST00000490653 RAB3GAP2Q9H2M9 1393 aa10.88□□□□□ -0.67
PRPF4B-208ENST00000490653 RPGRIP1LQ68CZ1 1315 aa10.87□□□□□ -0.67
PRPF4B-208ENST00000490653 ADGRL3Q9HAR2 1447 aa10.87□□□□□ -0.67
PRPF4B-208ENST00000490653 TMEM132EQ6IEE7 984 aa10.87□□□□□ -0.67
PRPF4B-208ENST00000490653 C8orf37Q96NL8 207 aa10.86□□□□□ -0.67
PRPF4B-208ENST00000490653 ORAI2Q96SN7 254 aa10.86□□□□□ -0.67
PRPF4B-208ENST00000490653 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
PRPF4B-208ENST00000490653 STK26Q9P289 416 aa10.86□□□□□ -0.67
PRPF4B-208ENST00000490653 ROBO2Q9HCK4 1378 aa10.86□□□□□ -0.67
PRPF4B-208ENST00000490653 NALCNQ8IZF0 1738 aa10.86□□□□□ -0.67
PRPF4B-208ENST00000490653 C1orf167Q5SNV9 1468 aa10.86□□□□□ -0.67
PRPF4B-208ENST00000490653 SPATA31E1Q6ZUB1 1445 aa10.85□□□□□ -0.67
PRPF4B-208ENST00000490653 WAPLQ7Z5K2 1190 aa10.85□□□□□ -0.67
PRPF4B-208ENST00000490653 EP400Q96L91 3159 aa10.85□□□□□ -0.67
PRPF4B-208ENST00000490653 LAMC1P11047 1609 aa10.84□□□□□ -0.67
PRPF4B-208ENST00000490653 RBM6P78332 1123 aaKnown RBP10.84□□□□□ -0.67
PRPF4B-208ENST00000490653 PPLO60437 1756 aa10.84□□□□□ -0.67
PRPF4B-208ENST00000490653 CCDC144AA2RUR9 1427 aa10.84□□□□□ -0.67
PRPF4B-208ENST00000490653 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
PRPF4B-208ENST00000490653 ADAMTS2O95450 1211 aa10.83□□□□□ -0.68
PRPF4B-208ENST00000490653 VARS2Q5ST30 1063 aaKnown RBP10.83□□□□□ -0.68
PRPF4B-208ENST00000490653 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
PRPF4B-208ENST00000490653 LRRC59Q96AG4 307 aaKnown RBP10.83□□□□□ -0.68
PRPF4B-208ENST00000490653 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
PRPF4B-208ENST00000490653 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
PRPF4B-208ENST00000490653 FNBP4Q8N3X1 1017 aaPredicted RBP10.81□□□□□ -0.68
PRPF4B-208ENST00000490653 ATRNO75882 1429 aa10.81□□□□□ -0.68
PRPF4B-208ENST00000490653 PRAG1Q86YV5 1406 aa10.81□□□□□ -0.68
PRPF4B-208ENST00000490653 MYOM2P54296 1465 aa10.81□□□□□ -0.68
PRPF4B-208ENST00000490653 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
PRPF4B-208ENST00000490653 PLEKHH1Q9ULM0 1364 aa10.8□□□□□ -0.68
PRPF4B-208ENST00000490653 NLRP6P59044 892 aa10.8□□□□□ -0.68
PRPF4B-208ENST00000490653 FBXO22Q8NEZ5 403 aa10.8□□□□□ -0.68
PRPF4B-208ENST00000490653 KDM2AQ9Y2K7 1162 aa10.8□□□□□ -0.68
PRPF4B-208ENST00000490653 ANKRD30BQ9BXX2 1392 aa10.79□□□□□ -0.68
PRPF4B-208ENST00000490653 PTCH1Q13635 1447 aa10.79□□□□□ -0.68
PRPF4B-208ENST00000490653 ZNF687Q8N1G0 1237 aa10.79□□□□□ -0.68
PRPF4B-208ENST00000490653 C14orf93Q9H972 538 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-208ENST00000490653 NGLY1Q96IV0 654 aa10.78□□□□□ -0.68
PRPF4B-208ENST00000490653 BCL11BQ9C0K0 894 aaPredicted RBP10.78□□□□□ -0.68
PRPF4B-208ENST00000490653 TAOK2Q9UL54 1235 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms