RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 PLEKHG1Q9ULL1 1385 aa20.11■□□□□ 0.81
PTK7-216ENST00000489707 CPSF1Q10570 1443 aaKnown RBP20.11■□□□□ 0.81
PTK7-216ENST00000489707 AKAP12Q02952 1782 aa20.11■□□□□ 0.81
PTK7-216ENST00000489707 DIAPH1O60610 1272 aaKnown RBP20.11■□□□□ 0.81
PTK7-216ENST00000489707 U2SURPO15042 1029 aaKnown RBP20.1■□□□□ 0.81
PTK7-216ENST00000489707 DMRT2Q9Y5R5 561 aa20.1■□□□□ 0.81
PTK7-216ENST00000489707 MAP2P11137 1827 aaKnown RBP20.1■□□□□ 0.81
PTK7-216ENST00000489707 FER1L4A9Z1Z3 1794 aa20.1■□□□□ 0.81
PTK7-216ENST00000489707 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
PTK7-216ENST00000489707 AAMPQ13685 434 aa20.1■□□□□ 0.81
PTK7-216ENST00000489707 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
PTK7-216ENST00000489707 C3P01024 1663 aa20.09■□□□□ 0.81
PTK7-216ENST00000489707 CANXP27824 592 aaKnown RBP20.09■□□□□ 0.81
PTK7-216ENST00000489707 TXNDC2Q86VQ3 553 aa20.09■□□□□ 0.81
PTK7-216ENST00000489707 CCDC61Q9Y6R9 512 aa20.08■□□□□ 0.81
PTK7-216ENST00000489707 NEFMP07197 916 aa20.08■□□□□ 0.8
PTK7-216ENST00000489707 ANP32AP39687 249 aaKnown RBP20.08■□□□□ 0.8
PTK7-216ENST00000489707 ERICH6Q7L0X2 663 aa20.08■□□□□ 0.8
PTK7-216ENST00000489707 BCAR3O75815 825 aa20.07■□□□□ 0.8
PTK7-216ENST00000489707 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
PTK7-216ENST00000489707 EID1Q9Y6B2 187 aa20.07■□□□□ 0.8
PTK7-216ENST00000489707 ADAMTS13Q76LX8 1427 aa20.07■□□□□ 0.8
PTK7-216ENST00000489707 KDM2BQ8NHM5 1336 aa20.06■□□□□ 0.8
PTK7-216ENST00000489707 NUDT16Q96DE0 195 aaKnown RBP20.06■□□□□ 0.8
PTK7-216ENST00000489707 PLEKHF1Q96S99 279 aa20.06■□□□□ 0.8
PTK7-216ENST00000489707 IL16Q14005 1332 aa20.06■□□□□ 0.8
PTK7-216ENST00000489707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.06■□□□□ 0.8
PTK7-216ENST00000489707 SLIT1O75093 1534 aa20.05■□□□□ 0.8
PTK7-216ENST00000489707 FCHSD2O94868 740 aa20.04■□□□□ 0.8
PTK7-216ENST00000489707 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
PTK7-216ENST00000489707 AATKQ6ZMQ8 1374 aa20.04■□□□□ 0.8
PTK7-216ENST00000489707 DIP2AQ14689 1571 aa20.03■□□□□ 0.8
PTK7-216ENST00000489707 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
PTK7-216ENST00000489707 CDK12Q9NYV4 1490 aaPredicted RBP20.03■□□□□ 0.8
PTK7-216ENST00000489707 TOPAZ1Q8N9V7 1692 aa20.02■□□□□ 0.8
PTK7-216ENST00000489707 ARHGAP23Q9P227 1491 aa20.02■□□□□ 0.79
PTK7-216ENST00000489707 COG3Q96JB2 828 aa20.01■□□□□ 0.79
PTK7-216ENST00000489707 POLKQ9UBT6 870 aa20.01■□□□□ 0.79
PTK7-216ENST00000489707 MSH5O43196 834 aa20■□□□□ 0.79
PTK7-216ENST00000489707 LRRC7Q96NW7 1537 aa20■□□□□ 0.79
PTK7-216ENST00000489707 ROBO2Q9HCK4 1378 aa20■□□□□ 0.79
PTK7-216ENST00000489707 PDE4AP27815 886 aa19.99■□□□□ 0.79
PTK7-216ENST00000489707 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.99■□□□□ 0.79
PTK7-216ENST00000489707 BACH2Q9BYV9 841 aa19.98■□□□□ 0.79
PTK7-216ENST00000489707 THEMISQ8N1K5 641 aaPredicted RBP19.98■□□□□ 0.79
PTK7-216ENST00000489707 LTKP29376 864 aa19.97■□□□□ 0.79
PTK7-216ENST00000489707 RIPK4P57078 832 aa19.97■□□□□ 0.79
PTK7-216ENST00000489707 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
PTK7-216ENST00000489707 PPM1GO15355 546 aaPredicted RBP19.96■□□□□ 0.79
PTK7-216ENST00000489707 CALD1Q05682 793 aaKnown RBP19.96■□□□□ 0.79
PTK7-216ENST00000489707 CLUAP1Q96AJ1 413 aa19.96■□□□□ 0.79
PTK7-216ENST00000489707 TRIM35Q9UPQ4 493 aa19.96■□□□□ 0.79
PTK7-216ENST00000489707 NRKQ7Z2Y5 1582 aa19.96■□□□□ 0.79
PTK7-216ENST00000489707 TBX22Q9Y458 520 aa19.96■□□□□ 0.79
PTK7-216ENST00000489707 PTCH1Q13635 1447 aa19.95■□□□□ 0.78
PTK7-216ENST00000489707 NME9Q86XW9 330 aa19.95■□□□□ 0.78
PTK7-216ENST00000489707 IPO9Q96P70 1041 aaKnown RBP19.94■□□□□ 0.78
PTK7-216ENST00000489707 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
PTK7-216ENST00000489707 CEBPAP49715 358 aaPredicted RBP19.94■□□□□ 0.78
PTK7-216ENST00000489707 PLEKHG3A1L390 1219 aa19.93■□□□□ 0.78
PTK7-216ENST00000489707 RIMS1Q86UR5 1692 aaKnown RBP19.92■□□□□ 0.78
PTK7-216ENST00000489707 PRR36Q9H6K5 1346 aa19.92■□□□□ 0.78
PTK7-216ENST00000489707 COG6Q9Y2V7 657 aa19.92■□□□□ 0.78
PTK7-216ENST00000489707 PRKAR2BP31323 418 aa19.92■□□□□ 0.78
PTK7-216ENST00000489707 ZKSCAN2Q63HK3 967 aa19.92■□□□□ 0.78
PTK7-216ENST00000489707 PMFBP1Q8TBY8 1022 aa19.92■□□□□ 0.78
PTK7-216ENST00000489707 PANK1Q8TE04 598 aa19.92■□□□□ 0.78
PTK7-216ENST00000489707 ZNF428Q96B54 188 aa19.91■□□□□ 0.78
PTK7-216ENST00000489707 NOP58Q9Y2X3 529 aaKnown RBP19.91■□□□□ 0.78
PTK7-216ENST00000489707 LMOD3Q0VAK6 560 aa19.9■□□□□ 0.78
PTK7-216ENST00000489707 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
PTK7-216ENST00000489707 IL13P35225 146 aa19.9■□□□□ 0.78
PTK7-216ENST00000489707 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
PTK7-216ENST00000489707 EMILIN1Q9Y6C2 1016 aa19.9■□□□□ 0.78
PTK7-216ENST00000489707 PTPRUQ92729 1446 aa19.89■□□□□ 0.78
PTK7-216ENST00000489707 EXOSC9Q06265 439 aaKnown RBP19.89■□□□□ 0.77
PTK7-216ENST00000489707 USP6P35125 1406 aa19.89■□□□□ 0.77
PTK7-216ENST00000489707 FTSJ3Q8IY81 847 aaKnown RBP19.88■□□□□ 0.77
PTK7-216ENST00000489707 TSR2Q969E8 191 aaKnown RBP19.88■□□□□ 0.77
PTK7-216ENST00000489707 SLC26A8Q96RN1 970 aa19.88■□□□□ 0.77
PTK7-216ENST00000489707 SMC4Q9NTJ3 1288 aa19.88■□□□□ 0.77
PTK7-216ENST00000489707 AMOTL2Q9Y2J4 779 aa19.88■□□□□ 0.77
PTK7-216ENST00000489707 XRN1Q8IZH2 1706 aaKnown RBP19.88■□□□□ 0.77
PTK7-216ENST00000489707 ACEP12821 1306 aa19.88■□□□□ 0.77
PTK7-216ENST00000489707 TTC21BQ7Z4L5 1316 aa19.88■□□□□ 0.77
PTK7-216ENST00000489707 PIK3R4Q99570 1358 aa19.87■□□□□ 0.77
PTK7-216ENST00000489707 KIF16BQ96L93 1317 aa19.87■□□□□ 0.77
PTK7-216ENST00000489707 TTC21AQ8NDW8 1320 aa19.87■□□□□ 0.77
PTK7-216ENST00000489707 NCKAP5LQ9HCH0 1330 aa19.87■□□□□ 0.77
PTK7-216ENST00000489707 ALDH1L2Q3SY69 923 aa19.86■□□□□ 0.77
PTK7-216ENST00000489707 DZIP1LQ8IYY4 767 aaKnown RBP19.86■□□□□ 0.77
PTK7-216ENST00000489707 ZBTB47Q9UFB7 747 aaPredicted RBP19.86■□□□□ 0.77
PTK7-216ENST00000489707 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
PTK7-216ENST00000489707 OVOS2A0A0J9YW53 1432 aa19.86■□□□□ 0.77
PTK7-216ENST00000489707 OVOS2Q6IE36 1432 aa19.86■□□□□ 0.77
PTK7-216ENST00000489707 IPO8O15397 1037 aaKnown RBP19.86■□□□□ 0.77
PTK7-216ENST00000489707 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
PTK7-216ENST00000489707 FAM161AQ3B820 660 aa19.86■□□□□ 0.77
PTK7-216ENST00000489707 BCL2L13Q9BXK5 485 aa19.86■□□□□ 0.77
PTK7-216ENST00000489707 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms