RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 DISP2A7MBM2 1401 aa24.1■■□□□ 1.45
USP48-210ENST00000489108 ACIN1Q9UKV3 1341 aaKnown RBP24.09■■□□□ 1.45
USP48-210ENST00000489108 TNS1Q9HBL0 1735 aaKnown RBP24.08■■□□□ 1.45
USP48-210ENST00000489108 TRIM37O94972 964 aa24.08■■□□□ 1.45
USP48-210ENST00000489108 CAMKK2Q96RR4 588 aa24.08■■□□□ 1.45
USP48-210ENST00000489108 PRR36Q9H6K5 1346 aa24.08■■□□□ 1.44
USP48-210ENST00000489108 THSD7AQ9UPZ6 1657 aa24.07■■□□□ 1.44
USP48-210ENST00000489108 PAK3O75914 559 aaPredicted RBP24.06■■□□□ 1.44
USP48-210ENST00000489108 PRDM11Q9NQV5 511 aa24.06■■□□□ 1.44
USP48-210ENST00000489108 MINK1Q8N4C8 1332 aaPredicted RBP24.06■■□□□ 1.44
USP48-210ENST00000489108 DLC1Q96QB1 1528 aa24.05■■□□□ 1.44
USP48-210ENST00000489108 TRAK1Q9UPV9 953 aa24.05■■□□□ 1.44
USP48-210ENST00000489108 FAM196AQ6ZSG2 479 aa24.04■■□□□ 1.44
USP48-210ENST00000489108 NGDNQ8NEJ9 315 aaKnown RBP24.04■■□□□ 1.44
USP48-210ENST00000489108 SPATA31A1Q5TZJ5 1347 aa24.04■■□□□ 1.44
USP48-210ENST00000489108 ADGRB2O60241 1585 aa24.03■■□□□ 1.44
USP48-210ENST00000489108 APBA3O96018 575 aa24.03■■□□□ 1.44
USP48-210ENST00000489108 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
USP48-210ENST00000489108 CRYBG1Q9Y4K1 1723 aa24.01■■□□□ 1.43
USP48-210ENST00000489108 WASLO00401 505 aaPredicted RBP24.01■■□□□ 1.43
USP48-210ENST00000489108 STRN4Q9NRL3 753 aa24.01■■□□□ 1.43
USP48-210ENST00000489108 EIF3AQ14152 1382 aaKnown RBP23.99■■□□□ 1.43
USP48-210ENST00000489108 KIAA0232Q92628 1395 aa23.99■■□□□ 1.43
USP48-210ENST00000489108 TULP4Q9NRJ4 1543 aa23.98■■□□□ 1.43
USP48-210ENST00000489108 ADGRB1O14514 1584 aa23.97■■□□□ 1.43
USP48-210ENST00000489108 YY1P25490 414 aa23.97■■□□□ 1.43
USP48-210ENST00000489108 ZC3H6P61129 1189 aaKnown RBP23.97■■□□□ 1.43
USP48-210ENST00000489108 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
USP48-210ENST00000489108 PARD3Q8TEW0 1356 aa23.95■■□□□ 1.42
USP48-210ENST00000489108 PDE3BQ13370 1112 aa23.94■■□□□ 1.42
USP48-210ENST00000489108 NUTM2GQ5VZR2 741 aa23.94■■□□□ 1.42
USP48-210ENST00000489108 EVA1CP58658 441 aa23.93■■□□□ 1.42
USP48-210ENST00000489108 KDM2AQ9Y2K7 1162 aa23.93■■□□□ 1.42
USP48-210ENST00000489108 NBPF8Q3BBV2 869 aa23.92■■□□□ 1.42
USP48-210ENST00000489108 NBPF14Q5TI25 921 aa23.92■■□□□ 1.42
USP48-210ENST00000489108 BARGINQ6ZT62 677 aa23.91■■□□□ 1.42
USP48-210ENST00000489108 NUDT16Q96DE0 195 aaKnown RBP23.91■■□□□ 1.42
USP48-210ENST00000489108 RREB1Q92766 1687 aa23.9■■□□□ 1.42
USP48-210ENST00000489108 PHRF1Q9P1Y6 1649 aaKnown RBP23.88■■□□□ 1.41
USP48-210ENST00000489108 NUP188Q5SRE5 1749 aa23.88■■□□□ 1.41
USP48-210ENST00000489108 LARP1Q6PKG0 1096 aaKnown RBP23.88■■□□□ 1.41
USP48-210ENST00000489108 SSH2Q76I76 1423 aa23.87■■□□□ 1.41
USP48-210ENST00000489108 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
USP48-210ENST00000489108 SPON1Q9HCB6 807 aa23.86■■□□□ 1.41
USP48-210ENST00000489108 PPP1R1BQ9UD71 204 aaPredicted RBP23.86■■□□□ 1.41
USP48-210ENST00000489108 TCP11L2Q8N4U5 519 aa23.85■■□□□ 1.41
USP48-210ENST00000489108 ATP7BP35670 1465 aa23.85■■□□□ 1.41
USP48-210ENST00000489108 ITSN1Q15811 1721 aa23.84■■□□□ 1.41
USP48-210ENST00000489108 CAMTA1Q9Y6Y1 1673 aa23.84■■□□□ 1.41
USP48-210ENST00000489108 KCNQ2O43526 872 aa23.84■■□□□ 1.41
USP48-210ENST00000489108 CDK19Q9BWU1 502 aa23.83■■□□□ 1.41
USP48-210ENST00000489108 ACEP12821 1306 aa23.83■■□□□ 1.4
USP48-210ENST00000489108 DCAF8L1A6NGE4 600 aa23.81■■□□□ 1.4
USP48-210ENST00000489108 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
USP48-210ENST00000489108 POLR3AO14802 1390 aaPredicted RBP23.79■■□□□ 1.4
USP48-210ENST00000489108 THRAP3Q9Y2W1 955 aaKnown RBP23.79■■□□□ 1.4
USP48-210ENST00000489108 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
USP48-210ENST00000489108 ARHGEF28Q8N1W1 1705 aaKnown RBP23.78■■□□□ 1.4
USP48-210ENST00000489108 CPDO75976 1380 aa23.77■■□□□ 1.4
USP48-210ENST00000489108 PLEKHG3A1L390 1219 aa23.76■■□□□ 1.39
USP48-210ENST00000489108 STAC3Q96MF2 364 aa23.76■■□□□ 1.39
USP48-210ENST00000489108 NRKQ7Z2Y5 1582 aa23.76■■□□□ 1.39
USP48-210ENST00000489108 LMO7Q8WWI1 1683 aa23.76■■□□□ 1.39
USP48-210ENST00000489108 NINLQ9Y2I6 1382 aa23.76■■□□□ 1.39
USP48-210ENST00000489108 GCP02774 474 aa23.74■■□□□ 1.39
USP48-210ENST00000489108 USP19O94966 1318 aa23.74■■□□□ 1.39
USP48-210ENST00000489108 C11orf95C9JLR9 678 aaPredicted RBP23.73■■□□□ 1.39
USP48-210ENST00000489108 PARP4Q9UKK3 1724 aaKnown RBP23.73■■□□□ 1.39
USP48-210ENST00000489108 PLSCR1O15162 318 aa23.72■■□□□ 1.39
USP48-210ENST00000489108 NLRP13Q86W25 1043 aa23.72■■□□□ 1.39
USP48-210ENST00000489108 TOPAZ1Q8N9V7 1692 aa23.71■■□□□ 1.39
USP48-210ENST00000489108 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
USP48-210ENST00000489108 COL5A2P05997 1499 aaPredicted RBP23.7■■□□□ 1.38
USP48-210ENST00000489108 PDGFDQ9GZP0 370 aaPredicted RBP23.7■■□□□ 1.38
USP48-210ENST00000489108 ANO8Q9HCE9 1232 aaPredicted RBP23.7■■□□□ 1.38
USP48-210ENST00000489108 SBF2Q86WG5 1849 aa23.69■■□□□ 1.38
USP48-210ENST00000489108 ZBTB7CA1YPR0 619 aa23.69■■□□□ 1.38
USP48-210ENST00000489108 PTF1AQ7RTS3 328 aa23.69■■□□□ 1.38
USP48-210ENST00000489108 OVOS2A0A0G2JMS6 1433 aa23.68■■□□□ 1.38
USP48-210ENST00000489108 OVOS2A0A0J9YW53 1432 aa23.68■■□□□ 1.38
USP48-210ENST00000489108 OVOS2Q6IE36 1432 aa23.68■■□□□ 1.38
USP48-210ENST00000489108 PEAK1Q9H792 1746 aa23.68■■□□□ 1.38
USP48-210ENST00000489108 CRB1P82279 1406 aa23.67■■□□□ 1.38
USP48-210ENST00000489108 DDB1Q16531 1140 aa23.66■■□□□ 1.38
USP48-210ENST00000489108 PROM2Q8N271 834 aa23.66■■□□□ 1.38
USP48-210ENST00000489108 BCL11BQ9C0K0 894 aaPredicted RBP23.66■■□□□ 1.38
USP48-210ENST00000489108 ZBTB7AO95365 584 aa23.65■■□□□ 1.38
USP48-210ENST00000489108 RGPD3A6NKT7 1758 aaPredicted RBP23.64■■□□□ 1.37
USP48-210ENST00000489108 RGPD4Q7Z3J3 1758 aa23.64■■□□□ 1.37
USP48-210ENST00000489108 CASZ1Q86V15 1759 aa23.64■■□□□ 1.37
USP48-210ENST00000489108 SRPK2P78362 688 aaKnown RBP23.63■■□□□ 1.37
USP48-210ENST00000489108 TOM1L2Q6ZVM7 507 aa23.63■■□□□ 1.37
USP48-210ENST00000489108 ATF5Q9Y2D1 282 aaPredicted RBP23.63■■□□□ 1.37
USP48-210ENST00000489108 PPIP5K1Q6PFW1 1433 aa23.62■■□□□ 1.37
USP48-210ENST00000489108 PTGER2P43116 358 aa23.61■■□□□ 1.37
USP48-210ENST00000489108 NLRP6P59044 892 aa23.61■■□□□ 1.37
USP48-210ENST00000489108 MARCH10Q8NA82 808 aaPredicted RBP23.61■■□□□ 1.37
USP48-210ENST00000489108 CABP2Q9NPB3 220 aa23.61■■□□□ 1.37
USP48-210ENST00000489108 LRRC37A3O60309 1634 aa23.61■■□□□ 1.37
USP48-210ENST00000489108 AATKQ6ZMQ8 1374 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms