RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 CGNL1Q0VF96 1302 aa20.61■□□□□ 0.89
CTNS-206ENST00000488623 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
CTNS-206ENST00000488623 FYB1O15117 783 aa20.6■□□□□ 0.89
CTNS-206ENST00000488623 EDC4Q6P2E9 1401 aaKnown RBP20.6■□□□□ 0.89
CTNS-206ENST00000488623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.59■□□□□ 0.89
CTNS-206ENST00000488623 SLAIN2Q9P270 581 aa20.59■□□□□ 0.89
CTNS-206ENST00000488623 USP6P35125 1406 aa20.59■□□□□ 0.89
CTNS-206ENST00000488623 TTC21BQ7Z4L5 1316 aa20.57■□□□□ 0.88
CTNS-206ENST00000488623 CCER2I3L3R5 266 aa20.57■□□□□ 0.88
CTNS-206ENST00000488623 SSH2Q76I76 1423 aa20.57■□□□□ 0.88
CTNS-206ENST00000488623 GGNBP2Q9H3C7 697 aa20.56■□□□□ 0.88
CTNS-206ENST00000488623 SOCS7O14512 581 aa20.55■□□□□ 0.88
CTNS-206ENST00000488623 MORC1Q86VD1 984 aa20.55■□□□□ 0.88
CTNS-206ENST00000488623 NME9Q86XW9 330 aa20.55■□□□□ 0.88
CTNS-206ENST00000488623 NSD2O96028 1365 aa20.55■□□□□ 0.88
CTNS-206ENST00000488623 FOXO3O43524 673 aa20.54■□□□□ 0.88
CTNS-206ENST00000488623 PSME1Q06323 249 aa20.54■□□□□ 0.88
CTNS-206ENST00000488623 ZRANB1Q9UGI0 708 aa20.54■□□□□ 0.88
CTNS-206ENST00000488623 NRKQ7Z2Y5 1582 aa20.54■□□□□ 0.88
CTNS-206ENST00000488623 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
CTNS-206ENST00000488623 KIF20BQ96Q89 1820 aa20.53■□□□□ 0.88
CTNS-206ENST00000488623 CCDC184Q52MB2 194 aa20.53■□□□□ 0.88
CTNS-206ENST00000488623 KIF1AQ12756 1690 aa20.52■□□□□ 0.88
CTNS-206ENST00000488623 TTC21AQ8NDW8 1320 aa20.52■□□□□ 0.87
CTNS-206ENST00000488623 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
CTNS-206ENST00000488623 BRINP3Q76B58 766 aa20.51■□□□□ 0.87
CTNS-206ENST00000488623 KRT28Q7Z3Y7 464 aa20.51■□□□□ 0.87
CTNS-206ENST00000488623 COL16A1Q07092 1604 aaPredicted RBP20.51■□□□□ 0.87
CTNS-206ENST00000488623 BRD4O60885 1362 aaPredicted RBP20.5■□□□□ 0.87
CTNS-206ENST00000488623 ANKRD26Q9UPS8 1709 aa20.5■□□□□ 0.87
CTNS-206ENST00000488623 XPCQ01831 940 aaPredicted RBP20.49■□□□□ 0.87
CTNS-206ENST00000488623 DDX17Q92841 729 aaKnown RBP20.49■□□□□ 0.87
CTNS-206ENST00000488623 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
CTNS-206ENST00000488623 AHDC1Q5TGY3 1603 aaPredicted RBP20.48■□□□□ 0.87
CTNS-206ENST00000488623 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
CTNS-206ENST00000488623 NLRP13Q86W25 1043 aa20.47■□□□□ 0.87
CTNS-206ENST00000488623 COG3Q96JB2 828 aa20.47■□□□□ 0.87
CTNS-206ENST00000488623 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
CTNS-206ENST00000488623 MRS2Q9HD23 443 aa20.45■□□□□ 0.86
CTNS-206ENST00000488623 NPHP3Q7Z494 1330 aa20.45■□□□□ 0.86
CTNS-206ENST00000488623 ABTB2Q8N961 1025 aa20.44■□□□□ 0.86
CTNS-206ENST00000488623 JCADQ9P266 1359 aa20.44■□□□□ 0.86
CTNS-206ENST00000488623 TRPM3Q9HCF6 1732 aaPredicted RBP20.44■□□□□ 0.86
CTNS-206ENST00000488623 PIK3C2AO00443 1686 aa20.43■□□□□ 0.86
CTNS-206ENST00000488623 FBLN1P23142 703 aa20.43■□□□□ 0.86
CTNS-206ENST00000488623 NLRP6P59044 892 aa20.43■□□□□ 0.86
CTNS-206ENST00000488623 OVOS2A0A0J9YW53 1432 aa20.43■□□□□ 0.86
CTNS-206ENST00000488623 OVOS2Q6IE36 1432 aa20.43■□□□□ 0.86
CTNS-206ENST00000488623 NHSL1Q5SYE7 1610 aa20.42■□□□□ 0.86
CTNS-206ENST00000488623 SHPRHQ149N8 1683 aa20.42■□□□□ 0.86
CTNS-206ENST00000488623 NUTM2GQ5VZR2 741 aa20.42■□□□□ 0.86
CTNS-206ENST00000488623 PXDNQ92626 1479 aa20.41■□□□□ 0.86
CTNS-206ENST00000488623 SBNO1A3KN83 1393 aa20.4■□□□□ 0.86
CTNS-206ENST00000488623 MTHFSP49914 203 aa20.4■□□□□ 0.86
CTNS-206ENST00000488623 RGS17Q9UGC6 210 aaPredicted RBP20.4■□□□□ 0.86
CTNS-206ENST00000488623 SOS2Q07890 1332 aaPredicted RBP20.39■□□□□ 0.85
CTNS-206ENST00000488623 MARF1Q9Y4F3 1742 aaKnown RBP20.39■□□□□ 0.85
CTNS-206ENST00000488623 USP54Q70EL1 1684 aa20.38■□□□□ 0.85
CTNS-206ENST00000488623 AATKQ6ZMQ8 1374 aa20.37■□□□□ 0.85
CTNS-206ENST00000488623 MAP2P11137 1827 aaKnown RBP20.37■□□□□ 0.85
CTNS-206ENST00000488623 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
CTNS-206ENST00000488623 POLKQ9UBT6 870 aa20.37■□□□□ 0.85
CTNS-206ENST00000488623 ALS2Q96Q42 1657 aa20.36■□□□□ 0.85
CTNS-206ENST00000488623 SPATA31A3Q5VYP0 1347 aa20.36■□□□□ 0.85
CTNS-206ENST00000488623 LMOD2Q6P5Q4 547 aa20.36■□□□□ 0.85
CTNS-206ENST00000488623 SPATA31A6Q5VVP1 1343 aa20.33■□□□□ 0.85
CTNS-206ENST00000488623 SOX12O15370 315 aa20.33■□□□□ 0.85
CTNS-206ENST00000488623 RRS1Q15050 365 aaKnown RBP20.33■□□□□ 0.85
CTNS-206ENST00000488623 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
CTNS-206ENST00000488623 EMILIN1Q9Y6C2 1016 aa20.33■□□□□ 0.85
CTNS-206ENST00000488623 LRP6O75581 1613 aa20.33■□□□□ 0.84
CTNS-206ENST00000488623 TNS3Q68CZ2 1445 aa20.33■□□□□ 0.84
CTNS-206ENST00000488623 USP19O94966 1318 aa20.31■□□□□ 0.84
CTNS-206ENST00000488623 PPM1GO15355 546 aaPredicted RBP20.3■□□□□ 0.84
CTNS-206ENST00000488623 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
CTNS-206ENST00000488623 SMG6Q86US8 1419 aaKnown RBP20.29■□□□□ 0.84
CTNS-206ENST00000488623 PLEKHG5O94827 1062 aa20.29■□□□□ 0.84
CTNS-206ENST00000488623 POTEAQ6S8J7 498 aa20.29■□□□□ 0.84
CTNS-206ENST00000488623 KCNH5Q8NCM2 988 aa20.29■□□□□ 0.84
CTNS-206ENST00000488623 ARHGEF10O15013 1369 aa20.29■□□□□ 0.84
CTNS-206ENST00000488623 INSRP06213 1382 aa20.29■□□□□ 0.84
CTNS-206ENST00000488623 PNPLA6Q8IY17 1366 aa20.29■□□□□ 0.84
CTNS-206ENST00000488623 MAP3K19Q56UN5 1328 aa20.28■□□□□ 0.84
CTNS-206ENST00000488623 SLIT3O75094 1523 aa20.28■□□□□ 0.84
CTNS-206ENST00000488623 GCP02774 474 aa20.28■□□□□ 0.84
CTNS-206ENST00000488623 MEX3CQ5U5Q3 659 aaKnown RBP20.28■□□□□ 0.84
CTNS-206ENST00000488623 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
CTNS-206ENST00000488623 CABLES1Q8TDN4 633 aa20.26■□□□□ 0.83
CTNS-206ENST00000488623 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
CTNS-206ENST00000488623 NFAT5O94916 1531 aa20.26■□□□□ 0.83
CTNS-206ENST00000488623 PEAK1Q9H792 1746 aa20.25■□□□□ 0.83
CTNS-206ENST00000488623 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
CTNS-206ENST00000488623 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
CTNS-206ENST00000488623 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
CTNS-206ENST00000488623 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
CTNS-206ENST00000488623 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
CTNS-206ENST00000488623 DIAPH1O60610 1272 aaKnown RBP20.23■□□□□ 0.83
CTNS-206ENST00000488623 AMPHP49418 695 aa20.23■□□□□ 0.83
CTNS-206ENST00000488623 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
CTNS-206ENST00000488623 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms