RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 SPSB2Q99619 263 aa8.44□□□□□ -1.06
SRRM1-215ENST00000488317 MAP10Q9P2G4 905 aa8.44□□□□□ -1.06
SRRM1-215ENST00000488317 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
SRRM1-215ENST00000488317 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
SRRM1-215ENST00000488317 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
SRRM1-215ENST00000488317 CDCA8Q53HL2 280 aa8.42□□□□□ -1.06
SRRM1-215ENST00000488317 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
SRRM1-215ENST00000488317 CCNYL3P0C7X3 344 aa8.41□□□□□ -1.06
SRRM1-215ENST00000488317 MSS51Q4VC12 460 aa8.41□□□□□ -1.06
SRRM1-215ENST00000488317 THSD4Q6ZMP0 1018 aa8.41□□□□□ -1.06
SRRM1-215ENST00000488317 ARMC2Q8NEN0 867 aa8.41□□□□□ -1.06
SRRM1-215ENST00000488317 UCN2Q96RP3 112 aa8.41□□□□□ -1.06
SRRM1-215ENST00000488317 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
SRRM1-215ENST00000488317 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
SRRM1-215ENST00000488317 TBC1D9Q6ZT07 1266 aa8.4□□□□□ -1.06
SRRM1-215ENST00000488317 FAM160A2Q8N612 972 aaPredicted RBP8.4□□□□□ -1.06
SRRM1-215ENST00000488317 EVA1BQ9NVM1 165 aa8.4□□□□□ -1.06
SRRM1-215ENST00000488317 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
SRRM1-215ENST00000488317 PTK2Q05397 1052 aa8.39□□□□□ -1.07
SRRM1-215ENST00000488317 KCNH2Q12809 1159 aa8.39□□□□□ -1.07
SRRM1-215ENST00000488317 ATP9BO43861 1147 aa8.38□□□□□ -1.07
SRRM1-215ENST00000488317 CCDC24Q8N4L8 307 aa8.38□□□□□ -1.07
SRRM1-215ENST00000488317 PRDM9Q9NQV7 894 aa8.38□□□□□ -1.07
SRRM1-215ENST00000488317 MAFBQ9Y5Q3 323 aaPredicted RBP8.38□□□□□ -1.07
SRRM1-215ENST00000488317 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
SRRM1-215ENST00000488317 NYAP1Q6ZVC0 841 aa8.37□□□□□ -1.07
SRRM1-215ENST00000488317 TLL1O43897 1013 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 ZPR1O75312 459 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 ADH1BP00325 375 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 SKIP12755 728 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 MMP16P51512 607 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 PTPN5P54829 565 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 PDXDC2PQ6P474 469 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 GPKOWQ92917 476 aaPredicted RBP eCLIP8.36□□□□□ -1.07
SRRM1-215ENST00000488317 VRTNQ9H8Y1 702 aa8.36□□□□□ -1.07
SRRM1-215ENST00000488317 CCDC9Q9Y3X0 531 aaKnown RBP8.36□□□□□ -1.07
SRRM1-215ENST00000488317 PIK3CDO00329 1044 aa8.35□□□□□ -1.07
SRRM1-215ENST00000488317 ZNF592Q92610 1267 aa8.35□□□□□ -1.07
SRRM1-215ENST00000488317 MTRQ99707 1265 aa8.35□□□□□ -1.07
SRRM1-215ENST00000488317 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
SRRM1-215ENST00000488317 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
SRRM1-215ENST00000488317 USTQ9Y2C2 406 aa8.35□□□□□ -1.07
SRRM1-215ENST00000488317 GPSM3Q9Y4H4 160 aa8.35□□□□□ -1.07
SRRM1-215ENST00000488317 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
SRRM1-215ENST00000488317 SLFNL1Q499Z3 407 aa8.34□□□□□ -1.07
SRRM1-215ENST00000488317 ARHGAP9Q9BRR9 750 aa8.34□□□□□ -1.07
SRRM1-215ENST00000488317 ATG7O95352 703 aa8.33□□□□□ -1.08
SRRM1-215ENST00000488317 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
SRRM1-215ENST00000488317 CARNS1A5YM72 827 aa8.32□□□□□ -1.08
SRRM1-215ENST00000488317 MCCD1P59942 119 aaPredicted RBP8.32□□□□□ -1.08
SRRM1-215ENST00000488317 ZBTB33Q86T24 672 aa8.32□□□□□ -1.08
SRRM1-215ENST00000488317 NFATC2IPQ8NCF5 419 aa8.32□□□□□ -1.08
SRRM1-215ENST00000488317 UNC93B1Q9H1C4 597 aa8.32□□□□□ -1.08
SRRM1-215ENST00000488317 IL21Q9HBE4 155 aa8.32□□□□□ -1.08
SRRM1-215ENST00000488317 USP17L3A6NCW0 530 aa8.31□□□□□ -1.08
SRRM1-215ENST00000488317 USP17L4A6NCW7 530 aa8.31□□□□□ -1.08
SRRM1-215ENST00000488317 USP17L2Q6R6M4 530 aa8.31□□□□□ -1.08
SRRM1-215ENST00000488317 USP17L1Q7RTZ2 530 aa8.31□□□□□ -1.08
SRRM1-215ENST00000488317 DEPDC4Q8N2C3 294 aa8.31□□□□□ -1.08
SRRM1-215ENST00000488317 ADAM32Q8TC27 787 aa8.31□□□□□ -1.08
SRRM1-215ENST00000488317 ZNF516Q92618 1163 aa8.31□□□□□ -1.08
SRRM1-215ENST00000488317 GZF1Q9H116 711 aaPredicted RBP8.31□□□□□ -1.08
SRRM1-215ENST00000488317 CEP126Q9P2H0 1117 aa8.31□□□□□ -1.08
SRRM1-215ENST00000488317 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
SRRM1-215ENST00000488317 PATL2C9JE40 543 aaKnown RBP8.3□□□□□ -1.08
SRRM1-215ENST00000488317 BRD1O95696 1058 aa8.3□□□□□ -1.08
SRRM1-215ENST00000488317 AGERQ15109 404 aa8.3□□□□□ -1.08
SRRM1-215ENST00000488317 PTCRAQ6ISU1 281 aaPredicted RBP8.3□□□□□ -1.08
SRRM1-215ENST00000488317 RNF135Q8IUD6 432 aa8.3□□□□□ -1.08
SRRM1-215ENST00000488317 TJAP1Q5JTD0 557 aa8.29□□□□□ -1.08
SRRM1-215ENST00000488317 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
SRRM1-215ENST00000488317 DZIP3Q86Y13 1208 aaKnown RBP8.29□□□□□ -1.08
SRRM1-215ENST00000488317 FAM174AQ8TBP5 190 aa8.29□□□□□ -1.08
SRRM1-215ENST00000488317 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
SRRM1-215ENST00000488317 MAGEB6P1A0A0J9YX57 407 aa8.28□□□□□ -1.08
SRRM1-215ENST00000488317 POTEMA6NI47 508 aa8.28□□□□□ -1.08
SRRM1-215ENST00000488317 BAP1Q92560 729 aa8.28□□□□□ -1.08
SRRM1-215ENST00000488317 OCSTAMPQ9BR26 566 aa8.28□□□□□ -1.08
SRRM1-215ENST00000488317 MKRN1Q9UHC7 482 aaKnown RBP8.28□□□□□ -1.08
SRRM1-215ENST00000488317 MYT1LQ9UL68 1186 aa8.28□□□□□ -1.08
SRRM1-215ENST00000488317 KCNA1Q09470 495 aa8.27□□□□□ -1.09
SRRM1-215ENST00000488317 LARP1Q6PKG0 1096 aaKnown RBP8.27□□□□□ -1.09
SRRM1-215ENST00000488317 PLEKHM2Q8IWE5 1019 aa8.27□□□□□ -1.09
SRRM1-215ENST00000488317 S1PR4O95977 384 aa8.26□□□□□ -1.09
SRRM1-215ENST00000488317 NCOA4Q13772 614 aa8.26□□□□□ -1.09
SRRM1-215ENST00000488317 LINC01559Q495D7 138 aa8.26□□□□□ -1.09
SRRM1-215ENST00000488317 TMCO4Q5TGY1 634 aa8.26□□□□□ -1.09
SRRM1-215ENST00000488317 SH3BP5LQ7L8J4 393 aa8.26□□□□□ -1.09
SRRM1-215ENST00000488317 PLPP7Q8NBV4 271 aa8.26□□□□□ -1.09
SRRM1-215ENST00000488317 NKX2-3Q8TAU0 364 aa8.26□□□□□ -1.09
SRRM1-215ENST00000488317 NOVA2Q9UNW9 492 aaKnown RBP8.26□□□□□ -1.09
SRRM1-215ENST00000488317 TMEM88BA6NKF7 163 aa8.25□□□□□ -1.09
SRRM1-215ENST00000488317 RASA1P20936 1047 aa8.25□□□□□ -1.09
SRRM1-215ENST00000488317 BPHLQ86WA6 291 aaPredicted RBP8.25□□□□□ -1.09
SRRM1-215ENST00000488317 FCF1Q9Y324 198 aaKnown RBP8.25□□□□□ -1.09
SRRM1-215ENST00000488317 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
SRRM1-215ENST00000488317 LZTS3O60299 673 aaPredicted RBP8.24□□□□□ -1.09
SRRM1-215ENST00000488317 RANGAP1P46060 587 aaPredicted RBP8.24□□□□□ -1.09
SRRM1-215ENST00000488317 ELOAQ14241 798 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms