RNA–Protein interactions for RNA: ENST00000488270.1

HDAC10-215, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-215ENST00000488270 ITSN1Q15811 1721 aa26.86■■□□□ 1.89
HDAC10-215ENST00000488270 FAM83GA6ND36 823 aa26.85■■□□□ 1.89
HDAC10-215ENST00000488270 RBM6P78332 1123 aaKnown RBP26.85■■□□□ 1.89
HDAC10-215ENST00000488270 TESK2Q96S53 571 aa26.85■■□□□ 1.89
HDAC10-215ENST00000488270 CCER1Q8TC90 406 aaPredicted RBP26.84■■□□□ 1.89
HDAC10-215ENST00000488270 TRPC5Q9UL62 973 aaPredicted RBP26.84■■□□□ 1.89
HDAC10-215ENST00000488270 SLIT2O94813 1529 aa26.84■■□□□ 1.89
HDAC10-215ENST00000488270 ATRNO75882 1429 aa26.83■■□□□ 1.89
HDAC10-215ENST00000488270 ST20-MTHFSA0A0A6YYL1 179 aa26.83■■□□□ 1.89
HDAC10-215ENST00000488270 HAP1P54257 671 aaPredicted RBP26.83■■□□□ 1.89
HDAC10-215ENST00000488270 UNC5CLQ8IV45 518 aa26.81■■□□□ 1.88
HDAC10-215ENST00000488270 NUTM2GQ5VZR2 741 aa26.8■■□□□ 1.88
HDAC10-215ENST00000488270 SSH2Q76I76 1423 aa26.8■■□□□ 1.88
HDAC10-215ENST00000488270 CDK12Q9NYV4 1490 aaPredicted RBP26.8■■□□□ 1.88
HDAC10-215ENST00000488270 BRD4O60885 1362 aaPredicted RBP26.79■■□□□ 1.88
HDAC10-215ENST00000488270 ATAD2Q6PL18 1390 aa26.79■■□□□ 1.88
HDAC10-215ENST00000488270 USP6P35125 1406 aa26.79■■□□□ 1.88
HDAC10-215ENST00000488270 ABTB2Q8N961 1025 aa26.78■■□□□ 1.88
HDAC10-215ENST00000488270 PUS7Q96PZ0 661 aaKnown RBP26.77■■□□□ 1.88
HDAC10-215ENST00000488270 MARF1Q9Y4F3 1742 aaKnown RBP26.76■■□□□ 1.88
HDAC10-215ENST00000488270 ZNF692Q9BU19 519 aaPredicted RBP26.76■■□□□ 1.87
HDAC10-215ENST00000488270 ABCA3Q99758 1704 aa26.76■■□□□ 1.87
HDAC10-215ENST00000488270 CPSF1Q10570 1443 aaKnown RBP26.75■■□□□ 1.87
HDAC10-215ENST00000488270 GJD4Q96KN9 370 aaPredicted RBP26.75■■□□□ 1.87
HDAC10-215ENST00000488270 USP19O94966 1318 aa26.74■■□□□ 1.87
HDAC10-215ENST00000488270 RGS12O14924 1447 aa26.73■■□□□ 1.87
HDAC10-215ENST00000488270 USP47Q96K76 1375 aa26.72■■□□□ 1.87
HDAC10-215ENST00000488270 SLC12A5Q9H2X9 1139 aa26.72■■□□□ 1.87
HDAC10-215ENST00000488270 CRYBG1Q9Y4K1 1723 aa26.71■■□□□ 1.87
HDAC10-215ENST00000488270 VPS72Q15906 364 aa26.71■■□□□ 1.87
HDAC10-215ENST00000488270 NLRP13Q86W25 1043 aa26.71■■□□□ 1.87
HDAC10-215ENST00000488270 TTC21BQ7Z4L5 1316 aa26.7■■□□□ 1.87
HDAC10-215ENST00000488270 BTG4Q9NY30 223 aa26.7■■□□□ 1.86
HDAC10-215ENST00000488270 KIAA0232Q92628 1395 aa26.7■■□□□ 1.86
HDAC10-215ENST00000488270 GCP02774 474 aa26.69■■□□□ 1.86
HDAC10-215ENST00000488270 CD163L1Q9NR16 1453 aa26.68■■□□□ 1.86
HDAC10-215ENST00000488270 SLC24A1O60721 1099 aa26.68■■□□□ 1.86
HDAC10-215ENST00000488270 NLRP6P59044 892 aa26.68■■□□□ 1.86
HDAC10-215ENST00000488270 ZC3H6P61129 1189 aaKnown RBP26.68■■□□□ 1.86
HDAC10-215ENST00000488270 PRDM11Q9NQV5 511 aa26.68■■□□□ 1.86
HDAC10-215ENST00000488270 CHRNA2Q15822 529 aa26.67■■□□□ 1.86
HDAC10-215ENST00000488270 TMC1Q8TDI8 760 aa26.66■■□□□ 1.86
HDAC10-215ENST00000488270 KTN1Q86UP2 1357 aaKnown RBP26.66■■□□□ 1.86
HDAC10-215ENST00000488270 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.65■■□□□ 1.86
HDAC10-215ENST00000488270 CPDO75976 1380 aa26.64■■□□□ 1.86
HDAC10-215ENST00000488270 ONECUT3O60422 494 aaPredicted RBP26.64■■□□□ 1.86
HDAC10-215ENST00000488270 TTC21AQ8NDW8 1320 aa26.64■■□□□ 1.85
HDAC10-215ENST00000488270 UPF1Q92900 1129 aaKnown RBP eCLIP26.62■■□□□ 1.85
HDAC10-215ENST00000488270 GLI3P10071 1580 aa26.62■■□□□ 1.85
HDAC10-215ENST00000488270 PLCH1Q4KWH8 1693 aa26.61■■□□□ 1.85
HDAC10-215ENST00000488270 NWD2Q9ULI1 1742 aa26.61■■□□□ 1.85
HDAC10-215ENST00000488270 PHRF1Q9P1Y6 1649 aaKnown RBP26.61■■□□□ 1.85
HDAC10-215ENST00000488270 COL14A1Q05707 1796 aaKnown RBP26.61■■□□□ 1.85
HDAC10-215ENST00000488270 TMF1P82094 1093 aa26.6■■□□□ 1.85
HDAC10-215ENST00000488270 NRKQ7Z2Y5 1582 aa26.59■■□□□ 1.85
HDAC10-215ENST00000488270 ZRANB1Q9UGI0 708 aa26.59■■□□□ 1.85
HDAC10-215ENST00000488270 HDGFL2Q7Z4V5 671 aaPredicted RBP26.58■■□□□ 1.85
HDAC10-215ENST00000488270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.58■■□□□ 1.85
HDAC10-215ENST00000488270 TERF2IPQ9NYB0 399 aa26.58■■□□□ 1.85
HDAC10-215ENST00000488270 A0A1W2PP64 1363 aa26.58■■□□□ 1.84
HDAC10-215ENST00000488270 PIK3C2AO00443 1686 aa26.57■■□□□ 1.84
HDAC10-215ENST00000488270 AKAP12Q02952 1782 aa26.57■■□□□ 1.84
HDAC10-215ENST00000488270 SLIT3O75094 1523 aa26.57■■□□□ 1.84
HDAC10-215ENST00000488270 CCDC9Q9Y3X0 531 aaKnown RBP26.57■■□□□ 1.84
HDAC10-215ENST00000488270 SPATA31A5Q5VU36 1347 aa26.57■■□□□ 1.84
HDAC10-215ENST00000488270 SPATA31A7Q8IWB4 1347 aa26.57■■□□□ 1.84
HDAC10-215ENST00000488270 NINLQ9Y2I6 1382 aa26.57■■□□□ 1.84
HDAC10-215ENST00000488270 NME9Q86XW9 330 aa26.55■■□□□ 1.84
HDAC10-215ENST00000488270 SEPT12Q8IYM1 358 aa26.55■■□□□ 1.84
HDAC10-215ENST00000488270 NRAPQ86VF7 1730 aa26.55■■□□□ 1.84
HDAC10-215ENST00000488270 USP31Q70CQ4 1352 aa26.55■■□□□ 1.84
HDAC10-215ENST00000488270 CAMTA1Q9Y6Y1 1673 aa26.54■■□□□ 1.84
HDAC10-215ENST00000488270 EDC4Q6P2E9 1401 aaKnown RBP26.53■■□□□ 1.84
HDAC10-215ENST00000488270 ARHGEF25Q86VW2 580 aa26.52■■□□□ 1.84
HDAC10-215ENST00000488270 STRN4Q9NRL3 753 aa26.52■■□□□ 1.84
HDAC10-215ENST00000488270 AATKQ6ZMQ8 1374 aa26.51■■□□□ 1.83
HDAC10-215ENST00000488270 SPATA31A1Q5TZJ5 1347 aa26.51■■□□□ 1.83
HDAC10-215ENST00000488270 FAM98CQ17RN3 349 aaKnown RBP26.51■■□□□ 1.83
HDAC10-215ENST00000488270 KCNH5Q8NCM2 988 aa26.51■■□□□ 1.83
HDAC10-215ENST00000488270 MON2Q7Z3U7 1717 aa26.51■■□□□ 1.83
HDAC10-215ENST00000488270 EP400Q96L91 3159 aa26.5■■□□□ 1.83
HDAC10-215ENST00000488270 AXIN2Q9Y2T1 843 aa26.5■■□□□ 1.83
HDAC10-215ENST00000488270 CDCA8Q53HL2 280 aa26.49■■□□□ 1.83
HDAC10-215ENST00000488270 LARP1Q6PKG0 1096 aaKnown RBP26.49■■□□□ 1.83
HDAC10-215ENST00000488270 LMO7Q8WWI1 1683 aa26.49■■□□□ 1.83
HDAC10-215ENST00000488270 HSPA5P11021 654 aaKnown RBP26.48■■□□□ 1.83
HDAC10-215ENST00000488270 EVA1CP58658 441 aa26.48■■□□□ 1.83
HDAC10-215ENST00000488270 EIF4G2P78344 907 aaKnown RBP eCLIP26.48■■□□□ 1.83
HDAC10-215ENST00000488270 ANKRD36BQ8N2N9 1353 aa26.47■■□□□ 1.83
HDAC10-215ENST00000488270 SOX12O15370 315 aa26.46■■□□□ 1.83
HDAC10-215ENST00000488270 NFAT5O94916 1531 aa26.44■■□□□ 1.82
HDAC10-215ENST00000488270 ZBTB7CA1YPR0 619 aa26.44■■□□□ 1.82
HDAC10-215ENST00000488270 COL5A2P05997 1499 aaPredicted RBP26.43■■□□□ 1.82
HDAC10-215ENST00000488270 OVOS2A0A0J9YW53 1432 aa26.42■■□□□ 1.82
HDAC10-215ENST00000488270 OVOS2Q6IE36 1432 aa26.42■■□□□ 1.82
HDAC10-215ENST00000488270 KRT27Q7Z3Y8 459 aa26.42■■□□□ 1.82
HDAC10-215ENST00000488270 CARD14Q9BXL6 1004 aa26.42■■□□□ 1.82
HDAC10-215ENST00000488270 BARGINQ6ZT62 677 aa26.41■■□□□ 1.82
HDAC10-215ENST00000488270 USP35Q9P2H5 1018 aa26.4■■□□□ 1.82
HDAC10-215ENST00000488270 COL18A1P39060 1754 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms