RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 SH3BP2P78314 561 aa6.77□□□□□ -1.33
RBM28-207ENST00000488249 SKOR1P84550 965 aa6.77□□□□□ -1.33
RBM28-207ENST00000488249 ZNF511Q8NB15 262 aa6.77□□□□□ -1.33
RBM28-207ENST00000488249 APBB1O00213 710 aa6.76□□□□□ -1.33
RBM28-207ENST00000488249 NBPF14Q5TI25 921 aa6.76□□□□□ -1.33
RBM28-207ENST00000488249 PNMA1Q8ND90 353 aa6.76□□□□□ -1.33
RBM28-207ENST00000488249 GPKOWQ92917 476 aaPredicted RBP eCLIP6.76□□□□□ -1.332e-10■□□□□ 10.3
RBM28-207ENST00000488249 FKBPLQ9UIM3 349 aa6.76□□□□□ -1.33
RBM28-207ENST00000488249 WNT7AO00755 349 aa6.75□□□□□ -1.33
RBM28-207ENST00000488249 GDF9O60383 454 aa6.75□□□□□ -1.33
RBM28-207ENST00000488249 FOXC1Q12948 553 aa6.75□□□□□ -1.33
RBM28-207ENST00000488249 FLIIQ13045 1269 aa6.75□□□□□ -1.33
RBM28-207ENST00000488249 MCM6Q14566 821 aa6.75□□□□□ -1.33
RBM28-207ENST00000488249 RC3H1Q5TC82 1133 aaKnown RBP6.75□□□□□ -1.33
RBM28-207ENST00000488249 PKD2L1Q9P0L9 805 aa6.75□□□□□ -1.33
RBM28-207ENST00000488249 ZC3H4Q9UPT8 1303 aaKnown RBP6.75□□□□□ -1.33
RBM28-207ENST00000488249 TRIM67Q6ZTA4 783 aa6.74□□□□□ -1.33
RBM28-207ENST00000488249 FOXJ1Q92949 421 aa6.74□□□□□ -1.33
RBM28-207ENST00000488249 PRR20EP86478 221 aa6.73□□□□□ -1.33
RBM28-207ENST00000488249 PRR20CP86479 221 aa6.73□□□□□ -1.33
RBM28-207ENST00000488249 PRR20DP86480 221 aa6.73□□□□□ -1.33
RBM28-207ENST00000488249 PRR20BP86481 221 aa6.73□□□□□ -1.33
RBM28-207ENST00000488249 PRR20AP86496 221 aa6.73□□□□□ -1.33
RBM28-207ENST00000488249 PDXDC2PQ6P474 469 aa6.73□□□□□ -1.33
RBM28-207ENST00000488249 BPHLQ86WA6 291 aaPredicted RBP6.73□□□□□ -1.33
RBM28-207ENST00000488249 MRGPRX2Q96LB1 330 aa6.73□□□□□ -1.33
RBM28-207ENST00000488249 NDUFB9Q9Y6M9 179 aa6.73□□□□□ -1.33
RBM28-207ENST00000488249 TNFRSF10AO00220 468 aa6.72□□□□□ -1.33
RBM28-207ENST00000488249 VARSP26640 1264 aaKnown RBP6.72□□□□□ -1.33
RBM28-207ENST00000488249 AGERQ15109 404 aa6.72□□□□□ -1.33
RBM28-207ENST00000488249 SH3BP5LQ7L8J4 393 aa6.72□□□□□ -1.33
RBM28-207ENST00000488249 SH3RF1Q7Z6J0 888 aa6.72□□□□□ -1.33
RBM28-207ENST00000488249 EHBP1Q8NDI1 1231 aa6.72□□□□□ -1.33
RBM28-207ENST00000488249 PRM3Q9NNZ6 103 aa6.72□□□□□ -1.33
RBM28-207ENST00000488249 PDZRN3Q9UPQ7 1066 aa6.72□□□□□ -1.33
RBM28-207ENST00000488249 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
RBM28-207ENST00000488249 TBC1D2BQ9UPU7 963 aa6.71□□□□□ -1.34
RBM28-207ENST00000488249 GPSM3Q9Y4H4 160 aa6.71□□□□□ -1.34
RBM28-207ENST00000488249 SIAH2O43255 324 aa6.7□□□□□ -1.34
RBM28-207ENST00000488249 GFRA3O60609 400 aa6.7□□□□□ -1.34
RBM28-207ENST00000488249 GPR37L1O60883 481 aa6.7□□□□□ -1.34
RBM28-207ENST00000488249 PTK2Q05397 1052 aa6.7□□□□□ -1.34
RBM28-207ENST00000488249 ARHGAP9Q9BRR9 750 aa6.7□□□□□ -1.34
RBM28-207ENST00000488249 IRX2Q9BZI1 471 aaPredicted RBP6.7□□□□□ -1.34
RBM28-207ENST00000488249 GTF3C3Q9Y5Q9 886 aa6.7□□□□□ -1.34
RBM28-207ENST00000488249 MAGEB6P1A0A0J9YX57 407 aa6.69□□□□□ -1.34
RBM28-207ENST00000488249 CYP4X1Q8N118 509 aa6.69□□□□□ -1.34
RBM28-207ENST00000488249 SNIP1Q8TAD8 396 aaKnown RBP6.69□□□□□ -1.34
RBM28-207ENST00000488249 FAM174AQ8TBP5 190 aa6.69□□□□□ -1.34
RBM28-207ENST00000488249 OCSTAMPQ9BR26 566 aa6.69□□□□□ -1.34
RBM28-207ENST00000488249 GDPD2Q9HCC8 539 aa6.69□□□□□ -1.34
RBM28-207ENST00000488249 TOR4AQ9NXH8 423 aa6.69□□□□□ -1.34
RBM28-207ENST00000488249 ZBBXA8MT70 800 aa6.68□□□□□ -1.34
RBM28-207ENST00000488249 NRG2O14511 850 aaPredicted RBP6.68□□□□□ -1.34
RBM28-207ENST00000488249 UBTFP17480 764 aaKnown RBP6.68□□□□□ -1.34
RBM28-207ENST00000488249 LAPTM4AQ15012 233 aa6.68□□□□□ -1.34
RBM28-207ENST00000488249 ZBTB33Q86T24 672 aa6.68□□□□□ -1.34
RBM28-207ENST00000488249 C1QTNF2Q9BXJ5 285 aa6.68□□□□□ -1.34
RBM28-207ENST00000488249 CARD14Q9BXL6 1004 aa6.68□□□□□ -1.34
RBM28-207ENST00000488249 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
RBM28-207ENST00000488249 TTC24A2A3L6 582 aaPredicted RBP6.67□□□□□ -1.34
RBM28-207ENST00000488249 ERFEQ4G0M1 354 aa6.67□□□□□ -1.34
RBM28-207ENST00000488249 MPNDQ8N594 471 aa6.67□□□□□ -1.34
RBM28-207ENST00000488249 ADAM32Q8TC27 787 aa6.67□□□□□ -1.34
RBM28-207ENST00000488249 RAD21O60216 631 aa6.66□□□□□ -1.34
RBM28-207ENST00000488249 FBXO45P0C2W1 286 aa6.66□□□□□ -1.34
RBM28-207ENST00000488249 ABL2P42684 1182 aa6.66□□□□□ -1.34
RBM28-207ENST00000488249 IRF5Q13568 498 aa6.66□□□□□ -1.34
RBM28-207ENST00000488249 TRMT44Q8IYL2 757 aaKnown RBP6.66□□□□□ -1.34
RBM28-207ENST00000488249 POM121Q96HA1 1249 aa6.66□□□□□ -1.34
RBM28-207ENST00000488249 TLL2Q9Y6L7 1015 aa6.66□□□□□ -1.34
RBM28-207ENST00000488249 J3QL48 77 aa6.65□□□□□ -1.34
RBM28-207ENST00000488249 ALDH1A1P00352 501 aa6.65□□□□□ -1.34
RBM28-207ENST00000488249 NR1H3Q13133 447 aa6.65□□□□□ -1.34
RBM28-207ENST00000488249 CDK15Q96Q40 435 aa6.65□□□□□ -1.34
RBM28-207ENST00000488249 SMPD1P17405 629 aa6.64□□□□□ -1.35
RBM28-207ENST00000488249 ARID5BQ14865 1188 aa6.64□□□□□ -1.35
RBM28-207ENST00000488249 MAP4K5Q9Y4K4 846 aa6.64□□□□□ -1.35
RBM28-207ENST00000488249 FAM187AA6NFU0 413 aa6.63□□□□□ -1.35
RBM28-207ENST00000488249 VASH1Q7L8A9 365 aaPredicted RBP6.63□□□□□ -1.35
RBM28-207ENST00000488249 DZIP3Q86Y13 1208 aaKnown RBP6.63□□□□□ -1.35
RBM28-207ENST00000488249 CLUAP1Q96AJ1 413 aa6.63□□□□□ -1.35
RBM28-207ENST00000488249 SLC10A4Q96EP9 437 aa6.63□□□□□ -1.35
RBM28-207ENST00000488249 CDV3Q9UKY7 258 aaKnown RBP6.63□□□□□ -1.35
RBM28-207ENST00000488249 WASF2Q9Y6W5 498 aa6.63□□□□□ -1.35
RBM28-207ENST00000488249 DGAT1O75907 488 aa6.62□□□□□ -1.35
RBM28-207ENST00000488249 ADH1CP00326 375 aa6.62□□□□□ -1.35
RBM28-207ENST00000488249 GRM5P41594 1212 aa6.62□□□□□ -1.35
RBM28-207ENST00000488249 WASHC4Q2M389 1173 aa6.62□□□□□ -1.35
RBM28-207ENST00000488249 PKDCCQ504Y2 493 aa6.62□□□□□ -1.35
RBM28-207ENST00000488249 WWC1Q8IX03 1113 aa6.62□□□□□ -1.35
RBM28-207ENST00000488249 ZNF330Q9Y3S2 320 aaPredicted RBP6.62□□□□□ -1.35
RBM28-207ENST00000488249 VAC14Q08AM6 782 aa6.61□□□□□ -1.35
RBM28-207ENST00000488249 PCDHB9Q9Y5E1 797 aa6.61□□□□□ -1.35
RBM28-207ENST00000488249 MCCD1P59942 119 aaPredicted RBP6.6□□□□□ -1.35
RBM28-207ENST00000488249 NR5A1Q13285 461 aa6.6□□□□□ -1.35
RBM28-207ENST00000488249 ZNF592Q92610 1267 aa6.6□□□□□ -1.35
RBM28-207ENST00000488249 KCTD15Q96SI1 283 aaPredicted RBP6.6□□□□□ -1.35
RBM28-207ENST00000488249 A6NJR5 290 aa6.59□□□□□ -1.35
RBM28-207ENST00000488249 AVPP01185 164 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms