RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 POLR3AO14802 1390 aaPredicted RBP27.86■■■□□ 2.05
CD55-209ENST00000488171 PAK3O75914 559 aaPredicted RBP27.86■■■□□ 2.05
CD55-209ENST00000488171 CCDC61Q9Y6R9 512 aa27.86■■■□□ 2.05
CD55-209ENST00000488171 QRICH2Q9H0J4 1663 aa27.85■■■□□ 2.05
CD55-209ENST00000488171 VPS72Q15906 364 aa27.84■■■□□ 2.05
CD55-209ENST00000488171 ACEP12821 1306 aa27.83■■■□□ 2.05
CD55-209ENST00000488171 NRAPQ86VF7 1730 aa27.83■■■□□ 2.05
CD55-209ENST00000488171 PLEKHG3A1L390 1219 aa27.82■■■□□ 2.04
CD55-209ENST00000488171 COL14A1Q05707 1796 aaKnown RBP27.81■■■□□ 2.04
CD55-209ENST00000488171 NBPF8Q3BBV2 869 aa27.8■■■□□ 2.04
CD55-209ENST00000488171 SRPK2P78362 688 aaKnown RBP27.78■■■□□ 2.04
CD55-209ENST00000488171 CABP2Q9NPB3 220 aa27.77■■■□□ 2.04
CD55-209ENST00000488171 PHRF1Q9P1Y6 1649 aaKnown RBP27.77■■■□□ 2.04
CD55-209ENST00000488171 BRWD3Q6RI45 1802 aa27.77■■■□□ 2.04
CD55-209ENST00000488171 EP400Q96L91 3159 aa27.76■■■□□ 2.04
CD55-209ENST00000488171 BTG4Q9NY30 223 aa27.76■■■□□ 2.03
CD55-209ENST00000488171 PPIP5K1Q6PFW1 1433 aa27.76■■■□□ 2.03
CD55-209ENST00000488171 CCDC9Q9Y3X0 531 aaKnown RBP27.75■■■□□ 2.03
CD55-209ENST00000488171 ROCK2O75116 1388 aaKnown RBP27.75■■■□□ 2.03
CD55-209ENST00000488171 ONECUT3O60422 494 aaPredicted RBP27.74■■■□□ 2.03
CD55-209ENST00000488171 SEPT12Q8IYM1 358 aa27.73■■■□□ 2.03
CD55-209ENST00000488171 NUTM2GQ5VZR2 741 aa27.73■■■□□ 2.03
CD55-209ENST00000488171 PRDM11Q9NQV5 511 aa27.71■■■□□ 2.03
CD55-209ENST00000488171 KIAA0232Q92628 1395 aa27.7■■■□□ 2.03
CD55-209ENST00000488171 NRKQ7Z2Y5 1582 aa27.68■■■□□ 2.02
CD55-209ENST00000488171 CCDC125Q86Z20 511 aa27.67■■■□□ 2.02
CD55-209ENST00000488171 ABTB2Q8N961 1025 aa27.67■■■□□ 2.02
CD55-209ENST00000488171 CABP1Q9NZU7 370 aa27.67■■■□□ 2.02
CD55-209ENST00000488171 EVC2Q86UK5 1308 aa27.66■■■□□ 2.02
CD55-209ENST00000488171 USP19O94966 1318 aa27.65■■■□□ 2.02
CD55-209ENST00000488171 ZC3H6P61129 1189 aaKnown RBP27.65■■■□□ 2.02
CD55-209ENST00000488171 CHRNA2Q15822 529 aa27.65■■■□□ 2.02
CD55-209ENST00000488171 SPATA31A5Q5VU36 1347 aa27.64■■■□□ 2.02
CD55-209ENST00000488171 SPATA31A7Q8IWB4 1347 aa27.64■■■□□ 2.02
CD55-209ENST00000488171 FAM98CQ17RN3 349 aaKnown RBP27.64■■■□□ 2.02
CD55-209ENST00000488171 USP6P35125 1406 aa27.64■■■□□ 2.01
CD55-209ENST00000488171 BRD4O60885 1362 aaPredicted RBP27.64■■■□□ 2.01
CD55-209ENST00000488171 TRIM26Q12899 539 aaPredicted RBP27.63■■■□□ 2.01
CD55-209ENST00000488171 KRT27Q7Z3Y8 459 aa27.62■■■□□ 2.01
CD55-209ENST00000488171 BLMP54132 1417 aaPredicted RBP27.61■■■□□ 2.01
CD55-209ENST00000488171 NLRP13Q86W25 1043 aa27.6■■■□□ 2.01
CD55-209ENST00000488171 SSH2Q76I76 1423 aa27.59■■■□□ 2.01
CD55-209ENST00000488171 CPDO75976 1380 aa27.59■■■□□ 2.01
CD55-209ENST00000488171 TONSLQ96HA7 1378 aa27.59■■■□□ 2.01
CD55-209ENST00000488171 THSD7AQ9UPZ6 1657 aa27.59■■■□□ 2.01
CD55-209ENST00000488171 A0A0G2JS52 829 aa27.59■■■□□ 2.01
CD55-209ENST00000488171 MYT1Q01538 1121 aa27.59■■■□□ 2.01
CD55-209ENST00000488171 LMO7Q8WWI1 1683 aa27.58■■■□□ 2.01
CD55-209ENST00000488171 CAMTA1Q9Y6Y1 1673 aa27.56■■■□□ 2
CD55-209ENST00000488171 SPATA31A1Q5TZJ5 1347 aa27.56■■■□□ 2
CD55-209ENST00000488171 GCP02774 474 aa27.56■■■□□ 2
CD55-209ENST00000488171 CARD11Q9BXL7 1154 aa27.56■■■□□ 2
CD55-209ENST00000488171 STRN4Q9NRL3 753 aa27.56■■■□□ 2
CD55-209ENST00000488171 SBNO2Q9Y2G9 1366 aa27.55■■■□□ 2
CD55-209ENST00000488171 PIK3C2AO00443 1686 aa27.55■■■□□ 2
CD55-209ENST00000488171 AKAP12Q02952 1782 aa27.55■■■□□ 2
CD55-209ENST00000488171 SLIT3O75094 1523 aa27.53■■■□□ 2
CD55-209ENST00000488171 NLRP6P59044 892 aa27.52■■■□□ 2
CD55-209ENST00000488171 CPSF1Q10570 1443 aaKnown RBP27.5■■□□□ 1.99
CD55-209ENST00000488171 ZNF692Q9BU19 519 aaPredicted RBP27.5■■□□□ 1.99
CD55-209ENST00000488171 EVA1CP58658 441 aa27.49■■□□□ 1.99
CD55-209ENST00000488171 DEFB132Q7Z7B7 95 aa27.49■■□□□ 1.99
CD55-209ENST00000488171 LARP1Q6PKG0 1096 aaKnown RBP27.48■■□□□ 1.99
CD55-209ENST00000488171 TTC21BQ7Z4L5 1316 aa27.48■■□□□ 1.99
CD55-209ENST00000488171 SF3B2Q13435 895 aaKnown RBP27.48■■□□□ 1.99
CD55-209ENST00000488171 FAM182BQ5T319 152 aa27.48■■□□□ 1.99
CD55-209ENST00000488171 ZRANB1Q9UGI0 708 aa27.48■■□□□ 1.99
CD55-209ENST00000488171 USP35Q9P2H5 1018 aa27.47■■□□□ 1.99
CD55-209ENST00000488171 COL5A2P05997 1499 aaPredicted RBP27.46■■□□□ 1.99
CD55-209ENST00000488171 BARGINQ6ZT62 677 aa27.45■■□□□ 1.98
CD55-209ENST00000488171 MON2Q7Z3U7 1717 aa27.44■■□□□ 1.98
CD55-209ENST00000488171 KTN1Q86UP2 1357 aaKnown RBP27.44■■□□□ 1.98
CD55-209ENST00000488171 AATKQ6ZMQ8 1374 aa27.43■■□□□ 1.98
CD55-209ENST00000488171 TTC21AQ8NDW8 1320 aa27.43■■□□□ 1.98
CD55-209ENST00000488171 COL18A1P39060 1754 aa27.42■■□□□ 1.98
CD55-209ENST00000488171 RGPD1P0DJD0 1748 aa27.42■■□□□ 1.98
CD55-209ENST00000488171 CD163L1Q9NR16 1453 aa27.41■■□□□ 1.98
CD55-209ENST00000488171 ZBTB7CA1YPR0 619 aa27.41■■□□□ 1.98
CD55-209ENST00000488171 TCP11L2Q8N4U5 519 aa27.41■■□□□ 1.98
CD55-209ENST00000488171 CRB1P82279 1406 aa27.38■■□□□ 1.97
CD55-209ENST00000488171 TNS1Q9HBL0 1735 aaKnown RBP27.37■■□□□ 1.97
CD55-209ENST00000488171 BAG6P46379 1132 aa27.37■■□□□ 1.97
CD55-209ENST00000488171 THRAP3Q9Y2W1 955 aaKnown RBP27.37■■□□□ 1.97
CD55-209ENST00000488171 ARHGEF25Q86VW2 580 aa27.36■■□□□ 1.97
CD55-209ENST00000488171 NFAT5O94916 1531 aa27.36■■□□□ 1.97
CD55-209ENST00000488171 KCNH5Q8NCM2 988 aa27.35■■□□□ 1.97
CD55-209ENST00000488171 TESK2Q96S53 571 aa27.35■■□□□ 1.97
CD55-209ENST00000488171 AXIN2Q9Y2T1 843 aa27.35■■□□□ 1.97
CD55-209ENST00000488171 PARP4Q9UKK3 1724 aaKnown RBP27.35■■□□□ 1.97
CD55-209ENST00000488171 SLC12A5Q9H2X9 1139 aa27.35■■□□□ 1.97
CD55-209ENST00000488171 USP54Q70EL1 1684 aa27.34■■□□□ 1.97
CD55-209ENST00000488171 FAM196AQ6ZSG2 479 aa27.34■■□□□ 1.97
CD55-209ENST00000488171 TMC1Q8TDI8 760 aa27.34■■□□□ 1.97
CD55-209ENST00000488171 PUS7Q96PZ0 661 aaKnown RBP27.34■■□□□ 1.97
CD55-209ENST00000488171 ST20-MTHFSA0A0A6YYL1 179 aa27.33■■□□□ 1.97
CD55-209ENST00000488171 SOX12O15370 315 aa27.33■■□□□ 1.97
CD55-209ENST00000488171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.33■■□□□ 1.97
CD55-209ENST00000488171 USP31Q70CQ4 1352 aa27.33■■□□□ 1.96
CD55-209ENST00000488171 DISP2A7MBM2 1401 aa27.32■■□□□ 1.96
CD55-209ENST00000488171 PDE3BQ13370 1112 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms