RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 PHRF1Q9P1Y6 1649 aaKnown RBP31.14■■■□□ 2.58
RPL35-203ENST00000487431 SEPT12Q8IYM1 358 aa31.14■■■□□ 2.58
RPL35-203ENST00000487431 BLMP54132 1417 aaPredicted RBP31.14■■■□□ 2.58
RPL35-203ENST00000487431 POLR3AO14802 1390 aaPredicted RBP31.11■■■□□ 2.57
RPL35-203ENST00000487431 CDK19Q9BWU1 502 aa31.1■■■□□ 2.57
RPL35-203ENST00000487431 BTG4Q9NY30 223 aa31.09■■■□□ 2.57
RPL35-203ENST00000487431 CCDC9Q9Y3X0 531 aaKnown RBP31.08■■■□□ 2.57
RPL35-203ENST00000487431 NBPF1Q3BBV0 1214 aa31.07■■■□□ 2.56
RPL35-203ENST00000487431 PAK3O75914 559 aaPredicted RBP31.06■■■□□ 2.56
RPL35-203ENST00000487431 CCDC61Q9Y6R9 512 aa31.05■■■□□ 2.56
RPL35-203ENST00000487431 QRICH2Q9H0J4 1663 aa31.05■■■□□ 2.56
RPL35-203ENST00000487431 PLEKHG3A1L390 1219 aa31.04■■■□□ 2.56
RPL35-203ENST00000487431 KRT27Q7Z3Y8 459 aa31.04■■■□□ 2.56
RPL35-203ENST00000487431 ZRANB1Q9UGI0 708 aa31.04■■■□□ 2.56
RPL35-203ENST00000487431 SRCAPQ6ZRS2 3230 aa31.04■■■□□ 2.56
RPL35-203ENST00000487431 THSD7AQ9UPZ6 1657 aa31.03■■■□□ 2.56
RPL35-203ENST00000487431 ACEP12821 1306 aa31.01■■■□□ 2.56
RPL35-203ENST00000487431 SPATA31A5Q5VU36 1347 aa31■■■□□ 2.55
RPL35-203ENST00000487431 SPATA31A7Q8IWB4 1347 aa31■■■□□ 2.55
RPL35-203ENST00000487431 NBPF8Q3BBV2 869 aa31■■■□□ 2.55
RPL35-203ENST00000487431 PRDM11Q9NQV5 511 aa30.99■■■□□ 2.55
RPL35-203ENST00000487431 NRKQ7Z2Y5 1582 aa30.99■■■□□ 2.55
RPL35-203ENST00000487431 TRPM1Q7Z4N2 1603 aa30.98■■■□□ 2.55
RPL35-203ENST00000487431 KIAA0232Q92628 1395 aa30.98■■■□□ 2.55
RPL35-203ENST00000487431 FAM98CQ17RN3 349 aaKnown RBP30.98■■■□□ 2.55
RPL35-203ENST00000487431 CENPJQ9HC77 1338 aaPredicted RBP30.97■■■□□ 2.55
RPL35-203ENST00000487431 RGPD1P0DJD0 1748 aa30.95■■■□□ 2.55
RPL35-203ENST00000487431 LMO7Q8WWI1 1683 aa30.93■■■□□ 2.54
RPL35-203ENST00000487431 PPIP5K1Q6PFW1 1433 aa30.93■■■□□ 2.54
RPL35-203ENST00000487431 SF3B2Q13435 895 aaKnown RBP30.93■■■□□ 2.54
RPL35-203ENST00000487431 DEFB132Q7Z7B7 95 aa30.93■■■□□ 2.54
RPL35-203ENST00000487431 L3MBTL2Q969R5 705 aa30.92■■■□□ 2.54
RPL35-203ENST00000487431 A0A0G2JS52 829 aa30.9■■■□□ 2.54
RPL35-203ENST00000487431 MYT1Q01538 1121 aa30.9■■■□□ 2.54
RPL35-203ENST00000487431 USP19O94966 1318 aa30.9■■■□□ 2.54
RPL35-203ENST00000487431 SPATA31A1Q5TZJ5 1347 aa30.9■■■□□ 2.54
RPL35-203ENST00000487431 BRD4O60885 1362 aaPredicted RBP30.9■■■□□ 2.54
RPL35-203ENST00000487431 SRPK2P78362 688 aaKnown RBP30.89■■■□□ 2.54
RPL35-203ENST00000487431 TNS1Q9HBL0 1735 aaKnown RBP30.89■■■□□ 2.54
RPL35-203ENST00000487431 CHRNA2Q15822 529 aa30.88■■■□□ 2.53
RPL35-203ENST00000487431 NUTM2GQ5VZR2 741 aa30.88■■■□□ 2.53
RPL35-203ENST00000487431 CPDO75976 1380 aa30.88■■■□□ 2.53
RPL35-203ENST00000487431 ZC3H6P61129 1189 aaKnown RBP30.87■■■□□ 2.53
RPL35-203ENST00000487431 ABTB2Q8N961 1025 aa30.86■■■□□ 2.53
RPL35-203ENST00000487431 CABP2Q9NPB3 220 aa30.86■■■□□ 2.53
RPL35-203ENST00000487431 CAMTA1Q9Y6Y1 1673 aa30.86■■■□□ 2.53
RPL35-203ENST00000487431 SSH2Q76I76 1423 aa30.84■■■□□ 2.53
RPL35-203ENST00000487431 SIN3AQ96ST3 1273 aa30.83■■■□□ 2.53
RPL35-203ENST00000487431 USP6P35125 1406 aa30.81■■■□□ 2.52
RPL35-203ENST00000487431 BAG6P46379 1132 aa30.81■■■□□ 2.52
RPL35-203ENST00000487431 AKAP12Q02952 1782 aa30.81■■■□□ 2.52
RPL35-203ENST00000487431 DISP2A7MBM2 1401 aa30.81■■■□□ 2.52
RPL35-203ENST00000487431 NLRP13Q86W25 1043 aa30.8■■■□□ 2.52
RPL35-203ENST00000487431 STRN4Q9NRL3 753 aa30.8■■■□□ 2.52
RPL35-203ENST00000487431 PIK3C2AO00443 1686 aa30.8■■■□□ 2.52
RPL35-203ENST00000487431 SLIT3O75094 1523 aa30.79■■■□□ 2.52
RPL35-203ENST00000487431 LRP5O75197 1615 aa30.78■■■□□ 2.52
RPL35-203ENST00000487431 BARGINQ6ZT62 677 aa30.78■■■□□ 2.52
RPL35-203ENST00000487431 GCP02774 474 aa30.77■■■□□ 2.52
RPL35-203ENST00000487431 FAM182BQ5T319 152 aa30.77■■■□□ 2.52
RPL35-203ENST00000487431 CABP1Q9NZU7 370 aa30.77■■■□□ 2.52
RPL35-203ENST00000487431 EVC2Q86UK5 1308 aa30.76■■■□□ 2.52
RPL35-203ENST00000487431 ROCK2O75116 1388 aaKnown RBP30.75■■■□□ 2.51
RPL35-203ENST00000487431 PARP4Q9UKK3 1724 aaKnown RBP30.75■■■□□ 2.51
RPL35-203ENST00000487431 COL5A2P05997 1499 aaPredicted RBP30.75■■■□□ 2.51
RPL35-203ENST00000487431 EVA1CP58658 441 aa30.74■■■□□ 2.51
RPL35-203ENST00000487431 COL18A1P39060 1754 aa30.74■■■□□ 2.51
RPL35-203ENST00000487431 LARP1Q6PKG0 1096 aaKnown RBP30.72■■■□□ 2.51
RPL35-203ENST00000487431 NEUROD1Q13562 356 aa30.71■■■□□ 2.51
RPL35-203ENST00000487431 FAM196AQ6ZSG2 479 aa30.71■■■□□ 2.51
RPL35-203ENST00000487431 EN1Q05925 392 aaPredicted RBP30.69■■■□□ 2.5
RPL35-203ENST00000487431 TCP11L2Q8N4U5 519 aa30.69■■■□□ 2.5
RPL35-203ENST00000487431 USP35Q9P2H5 1018 aa30.69■■■□□ 2.5
RPL35-203ENST00000487431 THRAP3Q9Y2W1 955 aaKnown RBP30.69■■■□□ 2.5
RPL35-203ENST00000487431 AATKQ6ZMQ8 1374 aa30.67■■■□□ 2.5
RPL35-203ENST00000487431 NLRP6P59044 892 aa30.67■■■□□ 2.5
RPL35-203ENST00000487431 MON2Q7Z3U7 1717 aa30.67■■■□□ 2.5
RPL35-203ENST00000487431 WNK3Q9BYP7 1800 aa30.66■■■□□ 2.5
RPL35-203ENST00000487431 SBNO2Q9Y2G9 1366 aa30.66■■■□□ 2.5
RPL35-203ENST00000487431 CRB1P82279 1406 aa30.65■■■□□ 2.5
RPL35-203ENST00000487431 RREB1Q92766 1687 aa30.65■■■□□ 2.5
RPL35-203ENST00000487431 ZNF692Q9BU19 519 aaPredicted RBP30.65■■■□□ 2.5
RPL35-203ENST00000487431 CPSF1Q10570 1443 aaKnown RBP30.64■■■□□ 2.5
RPL35-203ENST00000487431 RGPD5Q99666 1765 aa30.64■■■□□ 2.49
RPL35-203ENST00000487431 TRIM37O94972 964 aa30.62■■■□□ 2.49
RPL35-203ENST00000487431 PEAK1Q9H792 1746 aa30.61■■■□□ 2.49
RPL35-203ENST00000487431 PDE3BQ13370 1112 aa30.61■■■□□ 2.49
RPL35-203ENST00000487431 TTC21BQ7Z4L5 1316 aa30.61■■■□□ 2.49
RPL35-203ENST00000487431 PARD3Q8TEW0 1356 aa30.61■■■□□ 2.49
RPL35-203ENST00000487431 USP54Q70EL1 1684 aa30.61■■■□□ 2.49
RPL35-203ENST00000487431 LRRC37A3O60309 1634 aa30.6■■■□□ 2.49
RPL35-203ENST00000487431 CAMKK2Q96RR4 588 aa30.6■■■□□ 2.49
RPL35-203ENST00000487431 SBF2Q86WG5 1849 aa30.59■■■□□ 2.49
RPL35-203ENST00000487431 TTC21AQ8NDW8 1320 aa30.59■■■□□ 2.49
RPL35-203ENST00000487431 PSDA5PKW4 1024 aaPredicted RBP30.59■■■□□ 2.49
RPL35-203ENST00000487431 NUP188Q5SRE5 1749 aa30.59■■■□□ 2.49
RPL35-203ENST00000487431 EZH2Q15910 746 aaKnown RBP30.58■■■□□ 2.49
RPL35-203ENST00000487431 NFAT5O94916 1531 aa30.57■■■□□ 2.48
RPL35-203ENST00000487431 ABCC6O95255 1503 aa30.55■■■□□ 2.48
RPL35-203ENST00000487431 ARHGEF25Q86VW2 580 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms