RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 FMN2Q9NZ56 1722 aa18.86■□□□□ 0.61
ATPAF1-205ENST00000487193 ANO8Q9HCE9 1232 aaPredicted RBP18.86■□□□□ 0.61
ATPAF1-205ENST00000487193 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
ATPAF1-205ENST00000487193 CLTCL1P53675 1640 aa18.85■□□□□ 0.61
ATPAF1-205ENST00000487193 STRN4Q9NRL3 753 aa18.85■□□□□ 0.61
ATPAF1-205ENST00000487193 KIF1BO60333 1816 aa18.85■□□□□ 0.61
ATPAF1-205ENST00000487193 GPR162Q16538 588 aa18.84■□□□□ 0.61
ATPAF1-205ENST00000487193 PLEKHH1Q9ULM0 1364 aa18.83■□□□□ 0.61
ATPAF1-205ENST00000487193 APLP2Q06481 763 aa18.83■□□□□ 0.6
ATPAF1-205ENST00000487193 RRBP1Q9P2E9 1410 aaKnown RBP18.82■□□□□ 0.6
ATPAF1-205ENST00000487193 PMFBP1Q8TBY8 1022 aa18.81■□□□□ 0.6
ATPAF1-205ENST00000487193 BCL11BQ9C0K0 894 aaPredicted RBP18.81■□□□□ 0.6
ATPAF1-205ENST00000487193 PRDM11Q9NQV5 511 aa18.81■□□□□ 0.6
ATPAF1-205ENST00000487193 CAPN15O75808 1086 aa18.78■□□□□ 0.6
ATPAF1-205ENST00000487193 CHRNA2Q15822 529 aa18.78■□□□□ 0.6
ATPAF1-205ENST00000487193 DLC1Q96QB1 1528 aa18.78■□□□□ 0.6
ATPAF1-205ENST00000487193 NRXN1Q9ULB1 1477 aa18.77■□□□□ 0.6
ATPAF1-205ENST00000487193 TECPR2O15040 1411 aa18.77■□□□□ 0.6
ATPAF1-205ENST00000487193 PELP1Q8IZL8 1130 aaKnown RBP18.77■□□□□ 0.6
ATPAF1-205ENST00000487193 TMEM132EQ6IEE7 984 aa18.76■□□□□ 0.59
ATPAF1-205ENST00000487193 HSPA6P17066 643 aa18.75■□□□□ 0.59
ATPAF1-205ENST00000487193 EVA1CP58658 441 aa18.75■□□□□ 0.59
ATPAF1-205ENST00000487193 PLSCR1O15162 318 aa18.74■□□□□ 0.59
ATPAF1-205ENST00000487193 ARXQ96QS3 562 aa18.74■□□□□ 0.59
ATPAF1-205ENST00000487193 SHANK3Q9BYB0 1731 aa18.74■□□□□ 0.59
ATPAF1-205ENST00000487193 IFT172Q9UG01 1749 aa18.74■□□□□ 0.59
ATPAF1-205ENST00000487193 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
ATPAF1-205ENST00000487193 BARGINQ6ZT62 677 aa18.73■□□□□ 0.59
ATPAF1-205ENST00000487193 MTFR1LQ9H019 292 aa18.72■□□□□ 0.59
ATPAF1-205ENST00000487193 PROM2Q8N271 834 aa18.71■□□□□ 0.59
ATPAF1-205ENST00000487193 SGIP1Q9BQI5 828 aa18.71■□□□□ 0.59
ATPAF1-205ENST00000487193 STK32BQ9NY57 414 aa18.71■□□□□ 0.59
ATPAF1-205ENST00000487193 PPLO60437 1756 aa18.7■□□□□ 0.58
ATPAF1-205ENST00000487193 KIAA0232Q92628 1395 aa18.7■□□□□ 0.58
ATPAF1-205ENST00000487193 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
ATPAF1-205ENST00000487193 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
ATPAF1-205ENST00000487193 ABCC11Q96J66 1382 aa18.69■□□□□ 0.58
ATPAF1-205ENST00000487193 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
ATPAF1-205ENST00000487193 ZC3H6P61129 1189 aaKnown RBP18.69■□□□□ 0.58
ATPAF1-205ENST00000487193 KLHL34Q8N239 644 aa18.69■□□□□ 0.58
ATPAF1-205ENST00000487193 ALS2Q96Q42 1657 aa18.69■□□□□ 0.58
ATPAF1-205ENST00000487193 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
ATPAF1-205ENST00000487193 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
ATPAF1-205ENST00000487193 ADGRF5Q8IZF2 1346 aa18.68■□□□□ 0.58
ATPAF1-205ENST00000487193 SLC15A2Q16348 729 aa18.67■□□□□ 0.58
ATPAF1-205ENST00000487193 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
ATPAF1-205ENST00000487193 RGPD3A6NKT7 1758 aaPredicted RBP18.67■□□□□ 0.58
ATPAF1-205ENST00000487193 RGPD4Q7Z3J3 1758 aa18.67■□□□□ 0.58
ATPAF1-205ENST00000487193 ROCK1Q13464 1354 aa18.67■□□□□ 0.58
ATPAF1-205ENST00000487193 GPRASP1Q5JY77 1395 aa18.67■□□□□ 0.58
ATPAF1-205ENST00000487193 ITGAEP38570 1179 aa18.66■□□□□ 0.58
ATPAF1-205ENST00000487193 CRYBG1Q9Y4K1 1723 aa18.65■□□□□ 0.58
ATPAF1-205ENST00000487193 KNDC1Q76NI1 1749 aa18.64■□□□□ 0.57
ATPAF1-205ENST00000487193 C11orf95C9JLR9 678 aaPredicted RBP18.64■□□□□ 0.57
ATPAF1-205ENST00000487193 SBF2Q86WG5 1849 aa18.64■□□□□ 0.57
ATPAF1-205ENST00000487193 SSH2Q76I76 1423 aa18.64■□□□□ 0.57
ATPAF1-205ENST00000487193 GPBP1L1Q9HC44 474 aaPredicted RBP18.62■□□□□ 0.57
ATPAF1-205ENST00000487193 MAP3K5Q99683 1374 aa18.62■□□□□ 0.57
ATPAF1-205ENST00000487193 YTHDC2Q9H6S0 1430 aaKnown RBP18.61■□□□□ 0.57
ATPAF1-205ENST00000487193 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
ATPAF1-205ENST00000487193 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
ATPAF1-205ENST00000487193 TXNRD1Q16881 649 aa18.61■□□□□ 0.57
ATPAF1-205ENST00000487193 COL13A1Q5TAT6 717 aaPredicted RBP18.61■□□□□ 0.57
ATPAF1-205ENST00000487193 ZNF526Q8TF50 670 aaPredicted RBP18.61■□□□□ 0.57
ATPAF1-205ENST00000487193 OVOS2A0A0G2JMS6 1433 aa18.6■□□□□ 0.57
ATPAF1-205ENST00000487193 OVOS2A0A0J9YW53 1432 aa18.6■□□□□ 0.57
ATPAF1-205ENST00000487193 OVOS2Q6IE36 1432 aa18.6■□□□□ 0.57
ATPAF1-205ENST00000487193 ATP10DQ9P241 1426 aa18.6■□□□□ 0.57
ATPAF1-205ENST00000487193 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
ATPAF1-205ENST00000487193 GOLGB1Q14789 3259 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-205ENST00000487193 SIRT1Q96EB6 747 aa18.59■□□□□ 0.57
ATPAF1-205ENST00000487193 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-205ENST00000487193 PEAK1Q9H792 1746 aa18.58■□□□□ 0.57
ATPAF1-205ENST00000487193 RGL3Q3MIN7 710 aa18.58■□□□□ 0.56
ATPAF1-205ENST00000487193 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.56
ATPAF1-205ENST00000487193 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
ATPAF1-205ENST00000487193 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
ATPAF1-205ENST00000487193 PRELPP51888 382 aa18.55■□□□□ 0.56
ATPAF1-205ENST00000487193 NLGN2Q8NFZ4 835 aa18.55■□□□□ 0.56
ATPAF1-205ENST00000487193 ANKARQ7Z5J8 1434 aa18.55■□□□□ 0.56
ATPAF1-205ENST00000487193 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
ATPAF1-205ENST00000487193 YBX3P16989 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATPAF1-205ENST00000487193 DDB1Q16531 1140 aa18.54■□□□□ 0.56
ATPAF1-205ENST00000487193 PHRF1Q9P1Y6 1649 aaKnown RBP18.53■□□□□ 0.56
ATPAF1-205ENST00000487193 TNS4Q8IZW8 715 aa18.53■□□□□ 0.56
ATPAF1-205ENST00000487193 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
ATPAF1-205ENST00000487193 POGKQ9P215 609 aa18.53■□□□□ 0.56
ATPAF1-205ENST00000487193 SLC34A2O95436 690 aa18.51■□□□□ 0.55
ATPAF1-205ENST00000487193 DNAJC5GQ8N7S2 189 aa18.51■□□□□ 0.55
ATPAF1-205ENST00000487193 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
ATPAF1-205ENST00000487193 ATP7BP35670 1465 aa18.51■□□□□ 0.55
ATPAF1-205ENST00000487193 PRR36Q9H6K5 1346 aa18.5■□□□□ 0.55
ATPAF1-205ENST00000487193 APLP1P51693 650 aa18.5■□□□□ 0.55
ATPAF1-205ENST00000487193 POLD1P28340 1107 aa18.49■□□□□ 0.55
ATPAF1-205ENST00000487193 MARCH10Q8NA82 808 aaPredicted RBP18.49■□□□□ 0.55
ATPAF1-205ENST00000487193 LRRC37A3O60309 1634 aa18.46■□□□□ 0.55
ATPAF1-205ENST00000487193 ZBTB7CA1YPR0 619 aa18.46■□□□□ 0.55
ATPAF1-205ENST00000487193 PIK3C2GO75747 1445 aa18.45■□□□□ 0.54
ATPAF1-205ENST00000487193 MINK1Q8N4C8 1332 aaPredicted RBP18.45■□□□□ 0.54
ATPAF1-205ENST00000487193 ANKRD30BQ9BXX2 1392 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms