RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 TOPAZ1Q8N9V7 1692 aa18.71■□□□□ 0.59
NR1H3-223ENST00000486991 ITSN1Q15811 1721 aa18.7■□□□□ 0.58
NR1H3-223ENST00000486991 QRICH2Q9H0J4 1663 aa18.69■□□□□ 0.58
NR1H3-223ENST00000486991 ARHGEF10O15013 1369 aa18.69■□□□□ 0.58
NR1H3-223ENST00000486991 BLMP54132 1417 aaPredicted RBP18.69■□□□□ 0.58
NR1H3-223ENST00000486991 ATP7BP35670 1465 aa18.69■□□□□ 0.58
NR1H3-223ENST00000486991 NWD2Q9ULI1 1742 aa18.69■□□□□ 0.58
NR1H3-223ENST00000486991 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
NR1H3-223ENST00000486991 A0A0G2JS52 829 aa18.67■□□□□ 0.58
NR1H3-223ENST00000486991 MYT1Q01538 1121 aa18.67■□□□□ 0.58
NR1H3-223ENST00000486991 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
NR1H3-223ENST00000486991 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
NR1H3-223ENST00000486991 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
NR1H3-223ENST00000486991 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
NR1H3-223ENST00000486991 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
NR1H3-223ENST00000486991 WASLO00401 505 aaPredicted RBP18.66■□□□□ 0.58
NR1H3-223ENST00000486991 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
NR1H3-223ENST00000486991 FAM182BQ5T319 152 aa18.65■□□□□ 0.58
NR1H3-223ENST00000486991 NRAPQ86VF7 1730 aa18.65■□□□□ 0.58
NR1H3-223ENST00000486991 GPRASP1Q5JY77 1395 aa18.64■□□□□ 0.57
NR1H3-223ENST00000486991 CRYBG1Q9Y4K1 1723 aa18.63■□□□□ 0.57
NR1H3-223ENST00000486991 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
NR1H3-223ENST00000486991 SF3B2Q13435 895 aaKnown RBP18.63■□□□□ 0.57
NR1H3-223ENST00000486991 NGDNQ8NEJ9 315 aaKnown RBP18.63■□□□□ 0.57
NR1H3-223ENST00000486991 EIF3AQ14152 1382 aaKnown RBP18.63■□□□□ 0.57
NR1H3-223ENST00000486991 NBPF8Q3BBV2 869 aa18.61■□□□□ 0.57
NR1H3-223ENST00000486991 COL14A1Q05707 1796 aaKnown RBP18.6■□□□□ 0.57
NR1H3-223ENST00000486991 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
NR1H3-223ENST00000486991 PSDA5PKW4 1024 aaPredicted RBP18.59■□□□□ 0.57
NR1H3-223ENST00000486991 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
NR1H3-223ENST00000486991 NUDT16Q96DE0 195 aaKnown RBP18.59■□□□□ 0.57
NR1H3-223ENST00000486991 SPATA31A5Q5VU36 1347 aa18.57■□□□□ 0.56
NR1H3-223ENST00000486991 SPATA31A7Q8IWB4 1347 aa18.57■□□□□ 0.56
NR1H3-223ENST00000486991 CENPJQ9HC77 1338 aaPredicted RBP18.57■□□□□ 0.56
NR1H3-223ENST00000486991 PRDM11Q9NQV5 511 aa18.57■□□□□ 0.56
NR1H3-223ENST00000486991 CDK19Q9BWU1 502 aa18.56■□□□□ 0.56
NR1H3-223ENST00000486991 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
NR1H3-223ENST00000486991 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
NR1H3-223ENST00000486991 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
NR1H3-223ENST00000486991 EN1Q05925 392 aaPredicted RBP18.55■□□□□ 0.56
NR1H3-223ENST00000486991 STRN4Q9NRL3 753 aa18.54■□□□□ 0.56
NR1H3-223ENST00000486991 POLR3AO14802 1390 aaPredicted RBP18.54■□□□□ 0.56
NR1H3-223ENST00000486991 BAG6P46379 1132 aa18.53■□□□□ 0.56
NR1H3-223ENST00000486991 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
NR1H3-223ENST00000486991 THSD7AQ9UPZ6 1657 aa18.52■□□□□ 0.56
NR1H3-223ENST00000486991 ACEP12821 1306 aa18.51■□□□□ 0.55
NR1H3-223ENST00000486991 SPATA31A1Q5TZJ5 1347 aa18.5■□□□□ 0.55
NR1H3-223ENST00000486991 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
NR1H3-223ENST00000486991 AKAP12Q02952 1782 aa18.49■□□□□ 0.55
NR1H3-223ENST00000486991 PLEKHG3A1L390 1219 aa18.48■□□□□ 0.55
NR1H3-223ENST00000486991 EZH2Q15910 746 aaKnown RBP18.48■□□□□ 0.55
NR1H3-223ENST00000486991 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
NR1H3-223ENST00000486991 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
NR1H3-223ENST00000486991 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
NR1H3-223ENST00000486991 SBNO2Q9Y2G9 1366 aa18.47■□□□□ 0.55
NR1H3-223ENST00000486991 TNS1Q9HBL0 1735 aaKnown RBP18.47■□□□□ 0.55
NR1H3-223ENST00000486991 TRIM37O94972 964 aa18.47■□□□□ 0.55
NR1H3-223ENST00000486991 R3HDM1Q15032 1099 aaKnown RBP18.47■□□□□ 0.55
NR1H3-223ENST00000486991 CABP2Q9NPB3 220 aa18.46■□□□□ 0.55
NR1H3-223ENST00000486991 LRP5O75197 1615 aa18.45■□□□□ 0.54
NR1H3-223ENST00000486991 EVA1CP58658 441 aa18.45■□□□□ 0.54
NR1H3-223ENST00000486991 LARP1Q6PKG0 1096 aaKnown RBP18.45■□□□□ 0.54
NR1H3-223ENST00000486991 ABTB2Q8N961 1025 aa18.45■□□□□ 0.54
NR1H3-223ENST00000486991 NRKQ7Z2Y5 1582 aa18.45■□□□□ 0.54
NR1H3-223ENST00000486991 CAMTA1Q9Y6Y1 1673 aa18.44■□□□□ 0.54
NR1H3-223ENST00000486991 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
NR1H3-223ENST00000486991 PIK3C2AO00443 1686 aa18.43■□□□□ 0.54
NR1H3-223ENST00000486991 SSH2Q76I76 1423 aa18.42■□□□□ 0.54
NR1H3-223ENST00000486991 CAMKK2Q96RR4 588 aa18.42■□□□□ 0.54
NR1H3-223ENST00000486991 MON2Q7Z3U7 1717 aa18.42■□□□□ 0.54
NR1H3-223ENST00000486991 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
NR1H3-223ENST00000486991 APBA3O96018 575 aa18.41■□□□□ 0.54
NR1H3-223ENST00000486991 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
NR1H3-223ENST00000486991 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
NR1H3-223ENST00000486991 USP6P35125 1406 aa18.4■□□□□ 0.54
NR1H3-223ENST00000486991 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
NR1H3-223ENST00000486991 USP19O94966 1318 aa18.4■□□□□ 0.54
NR1H3-223ENST00000486991 DISP2A7MBM2 1401 aa18.4■□□□□ 0.54
NR1H3-223ENST00000486991 LMO7Q8WWI1 1683 aa18.39■□□□□ 0.53
NR1H3-223ENST00000486991 GCP02774 474 aa18.39■□□□□ 0.53
NR1H3-223ENST00000486991 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
NR1H3-223ENST00000486991 BARGINQ6ZT62 677 aa18.38■□□□□ 0.53
NR1H3-223ENST00000486991 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
NR1H3-223ENST00000486991 NLRP13Q86W25 1043 aa18.37■□□□□ 0.53
NR1H3-223ENST00000486991 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
NR1H3-223ENST00000486991 CPDO75976 1380 aa18.37■□□□□ 0.53
NR1H3-223ENST00000486991 CPSF1Q10570 1443 aaKnown RBP18.37■□□□□ 0.53
NR1H3-223ENST00000486991 CD163L1Q9NR16 1453 aa18.37■□□□□ 0.53
NR1H3-223ENST00000486991 BRD4O60885 1362 aaPredicted RBP18.36■□□□□ 0.53
NR1H3-223ENST00000486991 SLIT3O75094 1523 aa18.36■□□□□ 0.53
NR1H3-223ENST00000486991 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
NR1H3-223ENST00000486991 TESK2Q96S53 571 aa18.35■□□□□ 0.53
NR1H3-223ENST00000486991 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.53
NR1H3-223ENST00000486991 NLRP6P59044 892 aa18.33■□□□□ 0.52
NR1H3-223ENST00000486991 COL18A1P39060 1754 aa18.32■□□□□ 0.52
NR1H3-223ENST00000486991 NUP188Q5SRE5 1749 aa18.31■□□□□ 0.52
NR1H3-223ENST00000486991 RREB1Q92766 1687 aa18.31■□□□□ 0.52
NR1H3-223ENST00000486991 PTF1AQ7RTS3 328 aa18.3■□□□□ 0.52
NR1H3-223ENST00000486991 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
NR1H3-223ENST00000486991 USP47Q96K76 1375 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms