RNA–Protein interactions for RNA: ENST00000486440.5

PCOLCE-207, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 765 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-207ENST00000486440 ZNF692Q9BU19 519 aaPredicted RBP25.93■■□□□ 1.74
PCOLCE-207ENST00000486440 A0A1W2PP64 1363 aa25.93■■□□□ 1.74
PCOLCE-207ENST00000486440 MARF1Q9Y4F3 1742 aaKnown RBP25.92■■□□□ 1.74
PCOLCE-207ENST00000486440 ABCA3Q99758 1704 aa25.91■■□□□ 1.74
PCOLCE-207ENST00000486440 PIK3C2AO00443 1686 aa25.91■■□□□ 1.74
PCOLCE-207ENST00000486440 KTN1Q86UP2 1357 aaKnown RBP25.91■■□□□ 1.74
PCOLCE-207ENST00000486440 POLR3GLQ9BT43 218 aa25.89■■□□□ 1.74
PCOLCE-207ENST00000486440 BRD4O60885 1362 aaPredicted RBP25.89■■□□□ 1.74
PCOLCE-207ENST00000486440 WASHC2AQ641Q2 1341 aa25.88■■□□□ 1.73
PCOLCE-207ENST00000486440 ANKRD36BQ8N2N9 1353 aa25.88■■□□□ 1.73
PCOLCE-207ENST00000486440 PAK3O75914 559 aaPredicted RBP25.88■■□□□ 1.73
PCOLCE-207ENST00000486440 TERF2IPQ9NYB0 399 aa25.88■■□□□ 1.73
PCOLCE-207ENST00000486440 CCDC7Q96M83 1385 aa25.87■■□□□ 1.73
PCOLCE-207ENST00000486440 TTC21BQ7Z4L5 1316 aa25.87■■□□□ 1.73
PCOLCE-207ENST00000486440 LRP6O75581 1613 aa25.86■■□□□ 1.73
PCOLCE-207ENST00000486440 HDGFL2Q7Z4V5 671 aaPredicted RBP25.86■■□□□ 1.73
PCOLCE-207ENST00000486440 MED1Q15648 1581 aaPredicted RBP25.86■■□□□ 1.73
PCOLCE-207ENST00000486440 ARHGEF10O15013 1369 aa25.85■■□□□ 1.73
PCOLCE-207ENST00000486440 LMOD2Q6P5Q4 547 aa25.85■■□□□ 1.73
PCOLCE-207ENST00000486440 CARD14Q9BXL6 1004 aa25.85■■□□□ 1.73
PCOLCE-207ENST00000486440 SPATA31A6Q5VVP1 1343 aa25.85■■□□□ 1.73
PCOLCE-207ENST00000486440 EDC4Q6P2E9 1401 aaKnown RBP25.84■■□□□ 1.73
PCOLCE-207ENST00000486440 CABLES1Q8TDN4 633 aa25.83■■□□□ 1.73
PCOLCE-207ENST00000486440 PHRF1Q9P1Y6 1649 aaKnown RBP25.83■■□□□ 1.73
PCOLCE-207ENST00000486440 USP54Q70EL1 1684 aa25.83■■□□□ 1.73
PCOLCE-207ENST00000486440 NUTM2GQ5VZR2 741 aa25.82■■□□□ 1.72
PCOLCE-207ENST00000486440 ABTB2Q8N961 1025 aa25.82■■□□□ 1.72
PCOLCE-207ENST00000486440 TTC21AQ8NDW8 1320 aa25.81■■□□□ 1.72
PCOLCE-207ENST00000486440 KIF20BQ96Q89 1820 aa25.81■■□□□ 1.72
PCOLCE-207ENST00000486440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.8■■□□□ 1.72
PCOLCE-207ENST00000486440 NUTM2BA6NNL0 878 aaPredicted RBP25.79■■□□□ 1.72
PCOLCE-207ENST00000486440 NUTM2EB1AL46 878 aaPredicted RBP25.79■■□□□ 1.72
PCOLCE-207ENST00000486440 NUTM2AQ8IVF1 878 aaPredicted RBP25.79■■□□□ 1.72
PCOLCE-207ENST00000486440 PANK3Q9H999 370 aa25.79■■□□□ 1.72
PCOLCE-207ENST00000486440 ZRANB1Q9UGI0 708 aa25.79■■□□□ 1.72
PCOLCE-207ENST00000486440 PLEKHG5O94827 1062 aa25.77■■□□□ 1.72
PCOLCE-207ENST00000486440 NME9Q86XW9 330 aa25.77■■□□□ 1.72
PCOLCE-207ENST00000486440 USP31Q70CQ4 1352 aa25.75■■□□□ 1.71
PCOLCE-207ENST00000486440 USP19O94966 1318 aa25.75■■□□□ 1.71
PCOLCE-207ENST00000486440 SLIT3O75094 1523 aa25.74■■□□□ 1.71
PCOLCE-207ENST00000486440 NLRP6P59044 892 aa25.74■■□□□ 1.71
PCOLCE-207ENST00000486440 NLRP13Q86W25 1043 aa25.74■■□□□ 1.71
PCOLCE-207ENST00000486440 NSD3Q9BZ95 1437 aa25.73■■□□□ 1.71
PCOLCE-207ENST00000486440 FYB1O15117 783 aa25.72■■□□□ 1.71
PCOLCE-207ENST00000486440 ADAMTS2O95450 1211 aa25.71■■□□□ 1.71
PCOLCE-207ENST00000486440 ANKRD26Q9UPS8 1709 aa25.71■■□□□ 1.71
PCOLCE-207ENST00000486440 PER1O15534 1290 aaPredicted RBP25.69■■□□□ 1.7
PCOLCE-207ENST00000486440 OVOS2A0A0J9YW53 1432 aa25.69■■□□□ 1.7
PCOLCE-207ENST00000486440 OVOS2Q6IE36 1432 aa25.69■■□□□ 1.7
PCOLCE-207ENST00000486440 GCP02774 474 aa25.67■■□□□ 1.7
PCOLCE-207ENST00000486440 NFAT5O94916 1531 aa25.67■■□□□ 1.7
PCOLCE-207ENST00000486440 LTN1O94822 1766 aa25.67■■□□□ 1.7
PCOLCE-207ENST00000486440 RGPD5Q99666 1765 aa25.67■■□□□ 1.7
PCOLCE-207ENST00000486440 PLCH1Q4KWH8 1693 aa25.66■■□□□ 1.7
PCOLCE-207ENST00000486440 COL18A1P39060 1754 aa25.66■■□□□ 1.7
PCOLCE-207ENST00000486440 GGNBP2Q9H3C7 697 aa25.65■■□□□ 1.7
PCOLCE-207ENST00000486440 COL14A1Q05707 1796 aaKnown RBP25.64■■□□□ 1.7
PCOLCE-207ENST00000486440 FAM83GA6ND36 823 aa25.64■■□□□ 1.7
PCOLCE-207ENST00000486440 HAP1P54257 671 aaPredicted RBP25.64■■□□□ 1.7
PCOLCE-207ENST00000486440 MEX3CQ5U5Q3 659 aaKnown RBP25.63■■□□□ 1.69
PCOLCE-207ENST00000486440 RGS17Q9UGC6 210 aaPredicted RBP25.63■■□□□ 1.69
PCOLCE-207ENST00000486440 MAP2P11137 1827 aaKnown RBP25.63■■□□□ 1.69
PCOLCE-207ENST00000486440 KIAA0232Q92628 1395 aa25.62■■□□□ 1.69
PCOLCE-207ENST00000486440 ZC3H6P61129 1189 aaKnown RBP25.62■■□□□ 1.69
PCOLCE-207ENST00000486440 C8orf37Q96NL8 207 aa25.62■■□□□ 1.69
PCOLCE-207ENST00000486440 NWD2Q9ULI1 1742 aa25.62■■□□□ 1.69
PCOLCE-207ENST00000486440 CGNL1Q0VF96 1302 aa25.62■■□□□ 1.69
PCOLCE-207ENST00000486440 LMO7Q8WWI1 1683 aa25.61■■□□□ 1.69
PCOLCE-207ENST00000486440 CPDO75976 1380 aa25.6■■□□□ 1.69
PCOLCE-207ENST00000486440 AMER1Q5JTC6 1135 aaPredicted RBP25.6■■□□□ 1.69
PCOLCE-207ENST00000486440 COG3Q96JB2 828 aa25.6■■□□□ 1.69
PCOLCE-207ENST00000486440 NRAPQ86VF7 1730 aa25.6■■□□□ 1.69
PCOLCE-207ENST00000486440 FBLN1P23142 703 aa25.59■■□□□ 1.69
PCOLCE-207ENST00000486440 FNBP4Q8N3X1 1017 aaPredicted RBP25.59■■□□□ 1.69
PCOLCE-207ENST00000486440 NGLY1Q96IV0 654 aa25.59■■□□□ 1.69
PCOLCE-207ENST00000486440 SLIT2O94813 1529 aa25.58■■□□□ 1.69
PCOLCE-207ENST00000486440 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.58■■□□□ 1.69
PCOLCE-207ENST00000486440 SOX12O15370 315 aa25.58■■□□□ 1.69
PCOLCE-207ENST00000486440 KCNH5Q8NCM2 988 aa25.58■■□□□ 1.69
PCOLCE-207ENST00000486440 KNSTRNQ9Y448 316 aa25.58■■□□□ 1.69
PCOLCE-207ENST00000486440 ZNF316A6NFI3 1004 aaPredicted RBP25.57■■□□□ 1.68
PCOLCE-207ENST00000486440 CHRNA2Q15822 529 aa25.57■■□□□ 1.68
PCOLCE-207ENST00000486440 ARHGEF25Q86VW2 580 aa25.57■■□□□ 1.68
PCOLCE-207ENST00000486440 BCL9LQ86UU0 1499 aa25.57■■□□□ 1.68
PCOLCE-207ENST00000486440 AFF2P51816 1311 aa25.57■■□□□ 1.68
PCOLCE-207ENST00000486440 CAMTA1Q9Y6Y1 1673 aa25.55■■□□□ 1.68
PCOLCE-207ENST00000486440 PRDM11Q9NQV5 511 aa25.55■■□□□ 1.68
PCOLCE-207ENST00000486440 DDX10Q13206 875 aaKnown RBP25.54■■□□□ 1.68
PCOLCE-207ENST00000486440 NSD2O96028 1365 aa25.53■■□□□ 1.68
PCOLCE-207ENST00000486440 PEAK1Q9H792 1746 aa25.51■■□□□ 1.68
PCOLCE-207ENST00000486440 AATKQ6ZMQ8 1374 aa25.51■■□□□ 1.67
PCOLCE-207ENST00000486440 BTG4Q9NY30 223 aa25.5■■□□□ 1.67
PCOLCE-207ENST00000486440 NPC1L1Q9UHC9 1359 aa25.5■■□□□ 1.67
PCOLCE-207ENST00000486440 USP21Q9UK80 565 aa25.5■■□□□ 1.67
PCOLCE-207ENST00000486440 AXIN2Q9Y2T1 843 aa25.5■■□□□ 1.67
PCOLCE-207ENST00000486440 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
PCOLCE-207ENST00000486440 ZBTB7CA1YPR0 619 aa25.48■■□□□ 1.67
PCOLCE-207ENST00000486440 POTEAQ6S8J7 498 aa25.48■■□□□ 1.67
PCOLCE-207ENST00000486440 MAP3K19Q56UN5 1328 aa25.47■■□□□ 1.67
PCOLCE-207ENST00000486440 UNC5CLQ8IV45 518 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms