RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 RBM6P78332 1123 aaKnown RBP21.28■■□□□ 1
YIF1A-208ENST00000485820 HAP1P54257 671 aaPredicted RBP21.27■■□□□ 1
YIF1A-208ENST00000485820 TRPC5Q9UL62 973 aaPredicted RBP21.27■■□□□ 1
YIF1A-208ENST00000485820 TIMELESSQ9UNS1 1208 aa21.27■■□□□ 1
YIF1A-208ENST00000485820 ABCA3Q99758 1704 aa21.26■□□□□ 0.99
YIF1A-208ENST00000485820 SBNO2Q9Y2G9 1366 aa21.26■□□□□ 0.99
YIF1A-208ENST00000485820 FAM83GA6ND36 823 aa21.25■□□□□ 0.99
YIF1A-208ENST00000485820 SLIT2O94813 1529 aa21.24■□□□□ 0.99
YIF1A-208ENST00000485820 CDK12Q9NYV4 1490 aaPredicted RBP21.24■□□□□ 0.99
YIF1A-208ENST00000485820 ATRNO75882 1429 aa21.23■□□□□ 0.99
YIF1A-208ENST00000485820 UNC5CLQ8IV45 518 aa21.23■□□□□ 0.99
YIF1A-208ENST00000485820 CRYBG1Q9Y4K1 1723 aa21.21■□□□□ 0.99
YIF1A-208ENST00000485820 NUTM2GQ5VZR2 741 aa21.21■□□□□ 0.99
YIF1A-208ENST00000485820 ST20-MTHFSA0A0A6YYL1 179 aa21.2■□□□□ 0.98
YIF1A-208ENST00000485820 ABTB2Q8N961 1025 aa21.2■□□□□ 0.98
YIF1A-208ENST00000485820 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.19■□□□□ 0.98
YIF1A-208ENST00000485820 CCER1Q8TC90 406 aaPredicted RBP21.19■□□□□ 0.98
YIF1A-208ENST00000485820 GJD4Q96KN9 370 aaPredicted RBP21.19■□□□□ 0.98
YIF1A-208ENST00000485820 TESK2Q96S53 571 aa21.19■□□□□ 0.98
YIF1A-208ENST00000485820 BRD4O60885 1362 aaPredicted RBP21.19■□□□□ 0.98
YIF1A-208ENST00000485820 ZNF692Q9BU19 519 aaPredicted RBP21.18■□□□□ 0.98
YIF1A-208ENST00000485820 ATAD2Q6PL18 1390 aa21.18■□□□□ 0.98
YIF1A-208ENST00000485820 USP6P35125 1406 aa21.18■□□□□ 0.98
YIF1A-208ENST00000485820 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
YIF1A-208ENST00000485820 NWD2Q9ULI1 1742 aa21.16■□□□□ 0.98
YIF1A-208ENST00000485820 RGS12O14924 1447 aa21.16■□□□□ 0.98
YIF1A-208ENST00000485820 PUS7Q96PZ0 661 aaKnown RBP21.16■□□□□ 0.98
YIF1A-208ENST00000485820 PLCH1Q4KWH8 1693 aa21.15■□□□□ 0.98
YIF1A-208ENST00000485820 NLRP13Q86W25 1043 aa21.15■□□□□ 0.98
YIF1A-208ENST00000485820 CPSF1Q10570 1443 aaKnown RBP21.14■□□□□ 0.98
YIF1A-208ENST00000485820 VPS72Q15906 364 aa21.14■□□□□ 0.97
YIF1A-208ENST00000485820 BTG4Q9NY30 223 aa21.14■□□□□ 0.97
YIF1A-208ENST00000485820 AKAP12Q02952 1782 aa21.14■□□□□ 0.97
YIF1A-208ENST00000485820 COL14A1Q05707 1796 aaKnown RBP21.13■□□□□ 0.97
YIF1A-208ENST00000485820 USP19O94966 1318 aa21.13■□□□□ 0.97
YIF1A-208ENST00000485820 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
YIF1A-208ENST00000485820 PHRF1Q9P1Y6 1649 aaKnown RBP21.13■□□□□ 0.97
YIF1A-208ENST00000485820 SLC24A1O60721 1099 aa21.12■□□□□ 0.97
YIF1A-208ENST00000485820 SLC12A5Q9H2X9 1139 aa21.12■□□□□ 0.97
YIF1A-208ENST00000485820 PRDM11Q9NQV5 511 aa21.12■□□□□ 0.97
YIF1A-208ENST00000485820 KIAA0232Q92628 1395 aa21.11■□□□□ 0.97
YIF1A-208ENST00000485820 GLI3P10071 1580 aa21.11■□□□□ 0.97
YIF1A-208ENST00000485820 TTC21BQ7Z4L5 1316 aa21.11■□□□□ 0.97
YIF1A-208ENST00000485820 GCP02774 474 aa21.11■□□□□ 0.97
YIF1A-208ENST00000485820 NLRP6P59044 892 aa21.11■□□□□ 0.97
YIF1A-208ENST00000485820 USP47Q96K76 1375 aa21.1■□□□□ 0.97
YIF1A-208ENST00000485820 CHRNA2Q15822 529 aa21.1■□□□□ 0.97
YIF1A-208ENST00000485820 UPF1Q92900 1129 aaKnown RBP eCLIP21.1■□□□□ 0.97
YIF1A-208ENST00000485820 ONECUT3O60422 494 aaPredicted RBP21.09■□□□□ 0.97
YIF1A-208ENST00000485820 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
YIF1A-208ENST00000485820 NRAPQ86VF7 1730 aa21.09■□□□□ 0.97
YIF1A-208ENST00000485820 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
YIF1A-208ENST00000485820 CD163L1Q9NR16 1453 aa21.08■□□□□ 0.97
YIF1A-208ENST00000485820 TTC21AQ8NDW8 1320 aa21.07■□□□□ 0.96
YIF1A-208ENST00000485820 CCDC9Q9Y3X0 531 aaKnown RBP21.07■□□□□ 0.96
YIF1A-208ENST00000485820 PIK3C2AO00443 1686 aa21.07■□□□□ 0.96
YIF1A-208ENST00000485820 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
YIF1A-208ENST00000485820 CPDO75976 1380 aa21.06■□□□□ 0.96
YIF1A-208ENST00000485820 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
YIF1A-208ENST00000485820 TMF1P82094 1093 aa21.04■□□□□ 0.96
YIF1A-208ENST00000485820 HDGFL2Q7Z4V5 671 aaPredicted RBP21.04■□□□□ 0.96
YIF1A-208ENST00000485820 TERF2IPQ9NYB0 399 aa21.03■□□□□ 0.96
YIF1A-208ENST00000485820 SLIT3O75094 1523 aa21.03■□□□□ 0.96
YIF1A-208ENST00000485820 SPATA31A5Q5VU36 1347 aa21.03■□□□□ 0.96
YIF1A-208ENST00000485820 SPATA31A7Q8IWB4 1347 aa21.03■□□□□ 0.96
YIF1A-208ENST00000485820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.02■□□□□ 0.96
YIF1A-208ENST00000485820 SEPT12Q8IYM1 358 aa21.02■□□□□ 0.96
YIF1A-208ENST00000485820 CAMTA1Q9Y6Y1 1673 aa21.02■□□□□ 0.95
YIF1A-208ENST00000485820 ZRANB1Q9UGI0 708 aa21.01■□□□□ 0.95
YIF1A-208ENST00000485820 BRWD3Q6RI45 1802 aa21.01■□□□□ 0.95
YIF1A-208ENST00000485820 LMO7Q8WWI1 1683 aa21■□□□□ 0.95
YIF1A-208ENST00000485820 STRN4Q9NRL3 753 aa21■□□□□ 0.95
YIF1A-208ENST00000485820 A0A1W2PP64 1363 aa20.99■□□□□ 0.95
YIF1A-208ENST00000485820 USP31Q70CQ4 1352 aa20.99■□□□□ 0.95
YIF1A-208ENST00000485820 NINLQ9Y2I6 1382 aa20.99■□□□□ 0.95
YIF1A-208ENST00000485820 EVA1CP58658 441 aa20.99■□□□□ 0.95
YIF1A-208ENST00000485820 FAM98CQ17RN3 349 aaKnown RBP20.99■□□□□ 0.95
YIF1A-208ENST00000485820 NME9Q86XW9 330 aa20.99■□□□□ 0.95
YIF1A-208ENST00000485820 KCNH5Q8NCM2 988 aa20.99■□□□□ 0.95
YIF1A-208ENST00000485820 ARHGEF25Q86VW2 580 aa20.98■□□□□ 0.95
YIF1A-208ENST00000485820 SPATA31A1Q5TZJ5 1347 aa20.98■□□□□ 0.95
YIF1A-208ENST00000485820 EDC4Q6P2E9 1401 aaKnown RBP20.97■□□□□ 0.95
YIF1A-208ENST00000485820 COL18A1P39060 1754 aa20.97■□□□□ 0.95
YIF1A-208ENST00000485820 AATKQ6ZMQ8 1374 aa20.97■□□□□ 0.95
YIF1A-208ENST00000485820 LARP1Q6PKG0 1096 aaKnown RBP20.96■□□□□ 0.95
YIF1A-208ENST00000485820 CDCA8Q53HL2 280 aa20.95■□□□□ 0.94
YIF1A-208ENST00000485820 AXIN2Q9Y2T1 843 aa20.95■□□□□ 0.94
YIF1A-208ENST00000485820 ZBTB7CA1YPR0 619 aa20.94■□□□□ 0.94
YIF1A-208ENST00000485820 SOX12O15370 315 aa20.94■□□□□ 0.94
YIF1A-208ENST00000485820 USP54Q70EL1 1684 aa20.93■□□□□ 0.94
YIF1A-208ENST00000485820 KRT27Q7Z3Y8 459 aa20.93■□□□□ 0.94
YIF1A-208ENST00000485820 ANKRD36BQ8N2N9 1353 aa20.93■□□□□ 0.94
YIF1A-208ENST00000485820 EIF4G2P78344 907 aaKnown RBP eCLIP20.92■□□□□ 0.94
YIF1A-208ENST00000485820 COL5A2P05997 1499 aaPredicted RBP20.92■□□□□ 0.94
YIF1A-208ENST00000485820 NFAT5O94916 1531 aa20.92■□□□□ 0.94
YIF1A-208ENST00000485820 HSPA5P11021 654 aaKnown RBP20.91■□□□□ 0.94
YIF1A-208ENST00000485820 BARGINQ6ZT62 677 aa20.91■□□□□ 0.94
YIF1A-208ENST00000485820 RGPD5Q99666 1765 aa20.91■□□□□ 0.94
YIF1A-208ENST00000485820 USP35Q9P2H5 1018 aa20.91■□□□□ 0.94
YIF1A-208ENST00000485820 A0A0G2JS52 829 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms