RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
APTX-227ENST00000485479 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
APTX-227ENST00000485479 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
APTX-227ENST00000485479 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
APTX-227ENST00000485479 MON2Q7Z3U7 1717 aa16.52■□□□□ 0.24
APTX-227ENST00000485479 NRKQ7Z2Y5 1582 aa16.51■□□□□ 0.23
APTX-227ENST00000485479 ZRANB1Q9UGI0 708 aa16.51■□□□□ 0.23
APTX-227ENST00000485479 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
APTX-227ENST00000485479 ADAMTS2O95450 1211 aa16.51■□□□□ 0.23
APTX-227ENST00000485479 CDCA8Q53HL2 280 aa16.51■□□□□ 0.23
APTX-227ENST00000485479 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
APTX-227ENST00000485479 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
APTX-227ENST00000485479 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
APTX-227ENST00000485479 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
APTX-227ENST00000485479 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
APTX-227ENST00000485479 HDGFL2Q7Z4V5 671 aaPredicted RBP16.49■□□□□ 0.23
APTX-227ENST00000485479 SOX12O15370 315 aa16.49■□□□□ 0.23
APTX-227ENST00000485479 NME9Q86XW9 330 aa16.49■□□□□ 0.23
APTX-227ENST00000485479 PUS7Q96PZ0 661 aaKnown RBP16.49■□□□□ 0.23
APTX-227ENST00000485479 TTC21BQ7Z4L5 1316 aa16.49■□□□□ 0.23
APTX-227ENST00000485479 SSH2Q76I76 1423 aa16.49■□□□□ 0.23
APTX-227ENST00000485479 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
APTX-227ENST00000485479 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
APTX-227ENST00000485479 ABCA3Q99758 1704 aa16.48■□□□□ 0.23
APTX-227ENST00000485479 ANKRD36BQ8N2N9 1353 aa16.47■□□□□ 0.23
APTX-227ENST00000485479 HAP1P54257 671 aaPredicted RBP16.47■□□□□ 0.23
APTX-227ENST00000485479 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
APTX-227ENST00000485479 ARHGEF10O15013 1369 aa16.46■□□□□ 0.23
APTX-227ENST00000485479 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
APTX-227ENST00000485479 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
APTX-227ENST00000485479 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
APTX-227ENST00000485479 SPATA31A6Q5VVP1 1343 aa16.46■□□□□ 0.22
APTX-227ENST00000485479 NLRP6P59044 892 aa16.46■□□□□ 0.22
APTX-227ENST00000485479 MEX3CQ5U5Q3 659 aaKnown RBP16.46■□□□□ 0.22
APTX-227ENST00000485479 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
APTX-227ENST00000485479 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
APTX-227ENST00000485479 PANK3Q9H999 370 aa16.45■□□□□ 0.22
APTX-227ENST00000485479 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
APTX-227ENST00000485479 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
APTX-227ENST00000485479 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
APTX-227ENST00000485479 PHRF1Q9P1Y6 1649 aaKnown RBP16.44■□□□□ 0.22
APTX-227ENST00000485479 CNGB1Q14028 1251 aaPredicted RBP16.44■□□□□ 0.22
APTX-227ENST00000485479 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
APTX-227ENST00000485479 ZC3H6P61129 1189 aaKnown RBP16.42■□□□□ 0.22
APTX-227ENST00000485479 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
APTX-227ENST00000485479 FBLN1P23142 703 aa16.42■□□□□ 0.22
APTX-227ENST00000485479 TTC21AQ8NDW8 1320 aa16.4■□□□□ 0.22
APTX-227ENST00000485479 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
APTX-227ENST00000485479 NLRP13Q86W25 1043 aa16.4■□□□□ 0.22
APTX-227ENST00000485479 KIF20BQ96Q89 1820 aa16.39■□□□□ 0.21
APTX-227ENST00000485479 FYB1O15117 783 aa16.38■□□□□ 0.21
APTX-227ENST00000485479 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
APTX-227ENST00000485479 USP19O94966 1318 aa16.38■□□□□ 0.21
APTX-227ENST00000485479 GCP02774 474 aa16.38■□□□□ 0.21
APTX-227ENST00000485479 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
APTX-227ENST00000485479 RGS17Q9UGC6 210 aaPredicted RBP16.37■□□□□ 0.21
APTX-227ENST00000485479 AFF2P51816 1311 aa16.37■□□□□ 0.21
APTX-227ENST00000485479 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
APTX-227ENST00000485479 FAM83GA6ND36 823 aa16.37■□□□□ 0.21
APTX-227ENST00000485479 OVOS2A0A0J9YW53 1432 aa16.36■□□□□ 0.21
APTX-227ENST00000485479 OVOS2Q6IE36 1432 aa16.36■□□□□ 0.21
APTX-227ENST00000485479 SLIT3O75094 1523 aa16.35■□□□□ 0.21
APTX-227ENST00000485479 PRDM11Q9NQV5 511 aa16.35■□□□□ 0.21
APTX-227ENST00000485479 TNNT2P45379 298 aaPredicted RBP16.35■□□□□ 0.21
APTX-227ENST00000485479 PLCH1Q4KWH8 1693 aa16.34■□□□□ 0.21
APTX-227ENST00000485479 COG3Q96JB2 828 aa16.34■□□□□ 0.21
APTX-227ENST00000485479 NFAT5O94916 1531 aa16.33■□□□□ 0.21
APTX-227ENST00000485479 USP31Q70CQ4 1352 aa16.33■□□□□ 0.2
APTX-227ENST00000485479 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.2
APTX-227ENST00000485479 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.2
APTX-227ENST00000485479 USP54Q70EL1 1684 aa16.32■□□□□ 0.2
APTX-227ENST00000485479 CC2D1BQ5T0F9 858 aaKnown RBP16.32■□□□□ 0.2
APTX-227ENST00000485479 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
APTX-227ENST00000485479 LTN1O94822 1766 aa16.31■□□□□ 0.2
APTX-227ENST00000485479 RRS1Q15050 365 aaKnown RBP16.31■□□□□ 0.2
APTX-227ENST00000485479 BTG4Q9NY30 223 aa16.31■□□□□ 0.2
APTX-227ENST00000485479 USP21Q9UK80 565 aa16.31■□□□□ 0.2
APTX-227ENST00000485479 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
APTX-227ENST00000485479 POTEAQ6S8J7 498 aa16.31■□□□□ 0.2
APTX-227ENST00000485479 RGPD5Q99666 1765 aa16.3■□□□□ 0.2
APTX-227ENST00000485479 BCL9LQ86UU0 1499 aa16.3■□□□□ 0.2
APTX-227ENST00000485479 STRN4Q9NRL3 753 aa16.29■□□□□ 0.2
APTX-227ENST00000485479 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
APTX-227ENST00000485479 SLIT2O94813 1529 aa16.29■□□□□ 0.2
APTX-227ENST00000485479 AMER1Q5JTC6 1135 aaPredicted RBP16.29■□□□□ 0.2
APTX-227ENST00000485479 COL14A1Q05707 1796 aaKnown RBP16.29■□□□□ 0.2
APTX-227ENST00000485479 CAMTA1Q9Y6Y1 1673 aa16.29■□□□□ 0.2
APTX-227ENST00000485479 KCNH5Q8NCM2 988 aa16.28■□□□□ 0.2
APTX-227ENST00000485479 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
APTX-227ENST00000485479 ARHGEF25Q86VW2 580 aa16.27■□□□□ 0.2
APTX-227ENST00000485479 FNBP4Q8N3X1 1017 aaPredicted RBP16.27■□□□□ 0.2
APTX-227ENST00000485479 NRAPQ86VF7 1730 aa16.27■□□□□ 0.2
APTX-227ENST00000485479 CPDO75976 1380 aa16.27■□□□□ 0.2
APTX-227ENST00000485479 LMO7Q8WWI1 1683 aa16.27■□□□□ 0.2
APTX-227ENST00000485479 ZNF316A6NFI3 1004 aaPredicted RBP16.27■□□□□ 0.19
APTX-227ENST00000485479 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
APTX-227ENST00000485479 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
APTX-227ENST00000485479 EMILIN1Q9Y6C2 1016 aa16.26■□□□□ 0.19
APTX-227ENST00000485479 COL18A1P39060 1754 aa16.26■□□□□ 0.19
APTX-227ENST00000485479 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms