RNA–Protein interactions for RNA: ENST00000484574.1

POLR1B-213, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2

Gene POLR1B, Length 551 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-213ENST00000484574 ACEP12821 1306 aa17.05■□□□□ 0.32
POLR1B-213ENST00000484574 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
POLR1B-213ENST00000484574 ATRNO75882 1429 aa17.04■□□□□ 0.32
POLR1B-213ENST00000484574 PUS7Q96PZ0 661 aaKnown RBP17.04■□□□□ 0.32
POLR1B-213ENST00000484574 ABCA3Q99758 1704 aa17.04■□□□□ 0.32
POLR1B-213ENST00000484574 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
POLR1B-213ENST00000484574 LMOD2Q6P5Q4 547 aa17.03■□□□□ 0.32
POLR1B-213ENST00000484574 UNC5CLQ8IV45 518 aa17.03■□□□□ 0.32
POLR1B-213ENST00000484574 NWD2Q9ULI1 1742 aa17.03■□□□□ 0.32
POLR1B-213ENST00000484574 ATAD2Q6PL18 1390 aa17.02■□□□□ 0.32
POLR1B-213ENST00000484574 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
POLR1B-213ENST00000484574 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
POLR1B-213ENST00000484574 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
POLR1B-213ENST00000484574 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
POLR1B-213ENST00000484574 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
POLR1B-213ENST00000484574 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
POLR1B-213ENST00000484574 GJD4Q96KN9 370 aaPredicted RBP16.98■□□□□ 0.31
POLR1B-213ENST00000484574 PCGF6Q9BYE7 350 aa16.98■□□□□ 0.31
POLR1B-213ENST00000484574 COL14A1Q05707 1796 aaKnown RBP16.97■□□□□ 0.31
POLR1B-213ENST00000484574 VPS72Q15906 364 aa16.97■□□□□ 0.31
POLR1B-213ENST00000484574 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
POLR1B-213ENST00000484574 USP6P35125 1406 aa16.96■□□□□ 0.31
POLR1B-213ENST00000484574 FAM83GA6ND36 823 aa16.96■□□□□ 0.31
POLR1B-213ENST00000484574 ABTB2Q8N961 1025 aa16.96■□□□□ 0.31
POLR1B-213ENST00000484574 PLCH1Q4KWH8 1693 aa16.96■□□□□ 0.31
POLR1B-213ENST00000484574 RGS12O14924 1447 aa16.96■□□□□ 0.3
POLR1B-213ENST00000484574 SSH2Q76I76 1423 aa16.95■□□□□ 0.3
POLR1B-213ENST00000484574 USP19O94966 1318 aa16.95■□□□□ 0.3
POLR1B-213ENST00000484574 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
POLR1B-213ENST00000484574 CPSF1Q10570 1443 aaKnown RBP16.94■□□□□ 0.3
POLR1B-213ENST00000484574 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
POLR1B-213ENST00000484574 CPDO75976 1380 aa16.93■□□□□ 0.3
POLR1B-213ENST00000484574 NINLQ9Y2I6 1382 aa16.93■□□□□ 0.3
POLR1B-213ENST00000484574 PHRF1Q9P1Y6 1649 aaKnown RBP16.92■□□□□ 0.3
POLR1B-213ENST00000484574 AKAP12Q02952 1782 aa16.92■□□□□ 0.3
POLR1B-213ENST00000484574 PRDM11Q9NQV5 511 aa16.91■□□□□ 0.3
POLR1B-213ENST00000484574 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
POLR1B-213ENST00000484574 TESK2Q96S53 571 aa16.9■□□□□ 0.3
POLR1B-213ENST00000484574 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
POLR1B-213ENST00000484574 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
POLR1B-213ENST00000484574 GLI3P10071 1580 aa16.89■□□□□ 0.3
POLR1B-213ENST00000484574 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.29
POLR1B-213ENST00000484574 GCP02774 474 aa16.89■□□□□ 0.29
POLR1B-213ENST00000484574 KIAA0232Q92628 1395 aa16.89■□□□□ 0.29
POLR1B-213ENST00000484574 CCDC125Q86Z20 511 aa16.88■□□□□ 0.29
POLR1B-213ENST00000484574 TERF2IPQ9NYB0 399 aa16.88■□□□□ 0.29
POLR1B-213ENST00000484574 NRKQ7Z2Y5 1582 aa16.88■□□□□ 0.29
POLR1B-213ENST00000484574 TTC21BQ7Z4L5 1316 aa16.88■□□□□ 0.29
POLR1B-213ENST00000484574 KTN1Q86UP2 1357 aaKnown RBP16.88■□□□□ 0.29
POLR1B-213ENST00000484574 SLIT3O75094 1523 aa16.87■□□□□ 0.29
POLR1B-213ENST00000484574 NLRP6P59044 892 aa16.87■□□□□ 0.29
POLR1B-213ENST00000484574 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
POLR1B-213ENST00000484574 HDGFL2Q7Z4V5 671 aaPredicted RBP16.87■□□□□ 0.29
POLR1B-213ENST00000484574 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
POLR1B-213ENST00000484574 USP47Q96K76 1375 aa16.87■□□□□ 0.29
POLR1B-213ENST00000484574 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
POLR1B-213ENST00000484574 CCER1Q8TC90 406 aaPredicted RBP16.86■□□□□ 0.29
POLR1B-213ENST00000484574 TMF1P82094 1093 aa16.85■□□□□ 0.29
POLR1B-213ENST00000484574 NUTM2GQ5VZR2 741 aa16.85■□□□□ 0.29
POLR1B-213ENST00000484574 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
POLR1B-213ENST00000484574 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
POLR1B-213ENST00000484574 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
POLR1B-213ENST00000484574 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
POLR1B-213ENST00000484574 ZC3H6P61129 1189 aaKnown RBP16.84■□□□□ 0.29
POLR1B-213ENST00000484574 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
POLR1B-213ENST00000484574 USP31Q70CQ4 1352 aa16.84■□□□□ 0.29
POLR1B-213ENST00000484574 EDC4Q6P2E9 1401 aaKnown RBP16.84■□□□□ 0.29
POLR1B-213ENST00000484574 CD163L1Q9NR16 1453 aa16.84■□□□□ 0.29
POLR1B-213ENST00000484574 USP54Q70EL1 1684 aa16.84■□□□□ 0.29
POLR1B-213ENST00000484574 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
POLR1B-213ENST00000484574 LMO7Q8WWI1 1683 aa16.83■□□□□ 0.28
POLR1B-213ENST00000484574 ABCC6O95255 1503 aa16.82■□□□□ 0.28
POLR1B-213ENST00000484574 SEPT12Q8IYM1 358 aa16.82■□□□□ 0.28
POLR1B-213ENST00000484574 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
POLR1B-213ENST00000484574 SLC12A5Q9H2X9 1139 aa16.81■□□□□ 0.28
POLR1B-213ENST00000484574 THRAP3Q9Y2W1 955 aaKnown RBP16.81■□□□□ 0.28
POLR1B-213ENST00000484574 SPATA31A1Q5TZJ5 1347 aa16.8■□□□□ 0.28
POLR1B-213ENST00000484574 EVA1CP58658 441 aa16.8■□□□□ 0.28
POLR1B-213ENST00000484574 CHRNA2Q15822 529 aa16.8■□□□□ 0.28
POLR1B-213ENST00000484574 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
POLR1B-213ENST00000484574 CAMTA1Q9Y6Y1 1673 aa16.79■□□□□ 0.28
POLR1B-213ENST00000484574 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
POLR1B-213ENST00000484574 KRT27Q7Z3Y8 459 aa16.78■□□□□ 0.28
POLR1B-213ENST00000484574 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
POLR1B-213ENST00000484574 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
POLR1B-213ENST00000484574 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
POLR1B-213ENST00000484574 THSD7AQ9UPZ6 1657 aa16.77■□□□□ 0.28
POLR1B-213ENST00000484574 BRWD3Q6RI45 1802 aa16.77■□□□□ 0.27
POLR1B-213ENST00000484574 FAM98CQ17RN3 349 aaKnown RBP16.76■□□□□ 0.27
POLR1B-213ENST00000484574 COL18A1P39060 1754 aa16.76■□□□□ 0.27
POLR1B-213ENST00000484574 NFAT5O94916 1531 aa16.75■□□□□ 0.27
POLR1B-213ENST00000484574 C11orf95C9JLR9 678 aaPredicted RBP16.75■□□□□ 0.27
POLR1B-213ENST00000484574 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
POLR1B-213ENST00000484574 STRN4Q9NRL3 753 aa16.75■□□□□ 0.27
POLR1B-213ENST00000484574 BLMP54132 1417 aaPredicted RBP16.75■□□□□ 0.27
POLR1B-213ENST00000484574 CRB1P82279 1406 aa16.75■□□□□ 0.27
POLR1B-213ENST00000484574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
POLR1B-213ENST00000484574 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
POLR1B-213ENST00000484574 CDCA7Q9BWT1 371 aaPredicted RBP16.73■□□□□ 0.27
POLR1B-213ENST00000484574 OVOS2A0A0J9YW53 1432 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms