RNA–Protein interactions for RNA: ENST00000484453.1

RTKN-209, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-209ENST00000484453 ATAD2Q6PL18 1390 aa31.3■■■□□ 2.6
RTKN-209ENST00000484453 NGLY1Q96IV0 654 aa31.3■■■□□ 2.6
RTKN-209ENST00000484453 MON2Q7Z3U7 1717 aa31.29■■■□□ 2.6
RTKN-209ENST00000484453 RXRBP28702 533 aa31.29■■■□□ 2.6
RTKN-209ENST00000484453 CABP1Q9NZU7 370 aa31.29■■■□□ 2.6
RTKN-209ENST00000484453 PHRF1Q9P1Y6 1649 aaKnown RBP31.28■■■□□ 2.6
RTKN-209ENST00000484453 HAP1P54257 671 aaPredicted RBP31.27■■■□□ 2.6
RTKN-209ENST00000484453 QTRT2Q9H974 415 aaKnown RBP31.26■■■□□ 2.59
RTKN-209ENST00000484453 TESK2Q96S53 571 aa31.25■■■□□ 2.59
RTKN-209ENST00000484453 PLCH1Q4KWH8 1693 aa31.25■■■□□ 2.59
RTKN-209ENST00000484453 CABLES1Q8TDN4 633 aa31.24■■■□□ 2.59
RTKN-209ENST00000484453 NRKQ7Z2Y5 1582 aa31.23■■■□□ 2.59
RTKN-209ENST00000484453 USP6P35125 1406 aa31.22■■■□□ 2.59
RTKN-209ENST00000484453 PIK3C2AO00443 1686 aa31.19■■■□□ 2.58
RTKN-209ENST00000484453 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.19■■■□□ 2.58
RTKN-209ENST00000484453 USP21Q9UK80 565 aa31.19■■■□□ 2.58
RTKN-209ENST00000484453 SLC24A1O60721 1099 aa31.18■■■□□ 2.58
RTKN-209ENST00000484453 NWD2Q9ULI1 1742 aa31.18■■■□□ 2.58
RTKN-209ENST00000484453 NUTM2GQ5VZR2 741 aa31.16■■■□□ 2.58
RTKN-209ENST00000484453 FNBP4Q8N3X1 1017 aaPredicted RBP31.16■■■□□ 2.58
RTKN-209ENST00000484453 TMC1Q8TDI8 760 aa31.16■■■□□ 2.58
RTKN-209ENST00000484453 RBM6P78332 1123 aaKnown RBP31.15■■■□□ 2.58
RTKN-209ENST00000484453 TMF1P82094 1093 aa31.15■■■□□ 2.58
RTKN-209ENST00000484453 BRD4O60885 1362 aaPredicted RBP31.15■■■□□ 2.58
RTKN-209ENST00000484453 ABTB2Q8N961 1025 aa31.14■■■□□ 2.58
RTKN-209ENST00000484453 COL14A1Q05707 1796 aaKnown RBP31.14■■■□□ 2.58
RTKN-209ENST00000484453 RGS12O14924 1447 aa31.14■■■□□ 2.58
RTKN-209ENST00000484453 CPSF1Q10570 1443 aaKnown RBP31.13■■■□□ 2.57
RTKN-209ENST00000484453 PUS7Q96PZ0 661 aaKnown RBP31.12■■■□□ 2.57
RTKN-209ENST00000484453 KTN1Q86UP2 1357 aaKnown RBP31.12■■■□□ 2.57
RTKN-209ENST00000484453 CDK12Q9NYV4 1490 aaPredicted RBP31.12■■■□□ 2.57
RTKN-209ENST00000484453 MYOM1P52179 1685 aa31.12■■■□□ 2.57
RTKN-209ENST00000484453 ZNF692Q9BU19 519 aaPredicted RBP31.11■■■□□ 2.57
RTKN-209ENST00000484453 CD163L1Q9NR16 1453 aa31.11■■■□□ 2.57
RTKN-209ENST00000484453 UPF1Q92900 1129 aaKnown RBP eCLIP31.1■■■□□ 2.579e-8■■■□□ 15.9
RTKN-209ENST00000484453 NRAPQ86VF7 1730 aa31.1■■■□□ 2.57
RTKN-209ENST00000484453 BCL9LQ86UU0 1499 aa31.09■■■□□ 2.57
RTKN-209ENST00000484453 SSH2Q76I76 1423 aa31.09■■■□□ 2.57
RTKN-209ENST00000484453 SLC12A5Q9H2X9 1139 aa31.09■■■□□ 2.57
RTKN-209ENST00000484453 EIF4G2P78344 907 aaKnown RBP eCLIP31.08■■■□□ 2.57
RTKN-209ENST00000484453 TRPC5Q9UL62 973 aaPredicted RBP31.08■■■□□ 2.57
RTKN-209ENST00000484453 SLIT2O94813 1529 aa31.07■■■□□ 2.56
RTKN-209ENST00000484453 ATRNO75882 1429 aa31.07■■■□□ 2.56
RTKN-209ENST00000484453 NINLQ9Y2I6 1382 aa31.06■■■□□ 2.56
RTKN-209ENST00000484453 HDGFL2Q7Z4V5 671 aaPredicted RBP31.06■■■□□ 2.56
RTKN-209ENST00000484453 TTC21BQ7Z4L5 1316 aa31.04■■■□□ 2.56
RTKN-209ENST00000484453 USP54Q70EL1 1684 aa31.04■■■□□ 2.56
RTKN-209ENST00000484453 HSPA5P11021 654 aaKnown RBP31.04■■■□□ 2.56
RTKN-209ENST00000484453 NLRP13Q86W25 1043 aa31.04■■■□□ 2.56
RTKN-209ENST00000484453 A0A1W2PP64 1363 aa31.04■■■□□ 2.56
RTKN-209ENST00000484453 CDCA8Q53HL2 280 aa31.03■■■□□ 2.56
RTKN-209ENST00000484453 TERF2IPQ9NYB0 399 aa31.03■■■□□ 2.56
RTKN-209ENST00000484453 TTC21AQ8NDW8 1320 aa31.02■■■□□ 2.56
RTKN-209ENST00000484453 USP19O94966 1318 aa31.01■■■□□ 2.56
RTKN-209ENST00000484453 NLRP6P59044 892 aa31.01■■■□□ 2.55
RTKN-209ENST00000484453 SLIT3O75094 1523 aa31.01■■■□□ 2.55
RTKN-209ENST00000484453 KIF20BQ96Q89 1820 aa31■■■□□ 2.55
RTKN-209ENST00000484453 FAM83GA6ND36 823 aa30.99■■■□□ 2.55
RTKN-209ENST00000484453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.99■■■□□ 2.55
RTKN-209ENST00000484453 EDC4Q6P2E9 1401 aaKnown RBP30.98■■■□□ 2.55
RTKN-209ENST00000484453 KIAA0232Q92628 1395 aa30.98■■■□□ 2.55
RTKN-209ENST00000484453 PRDM11Q9NQV5 511 aa30.98■■■□□ 2.55
RTKN-209ENST00000484453 RGPD5Q99666 1765 aa30.97■■■□□ 2.55
RTKN-209ENST00000484453 ZC3H6P61129 1189 aaKnown RBP30.97■■■□□ 2.55
RTKN-209ENST00000484453 UNC5CLQ8IV45 518 aa30.97■■■□□ 2.55
RTKN-209ENST00000484453 LTN1O94822 1766 aa30.97■■■□□ 2.55
RTKN-209ENST00000484453 ANKRD36BQ8N2N9 1353 aa30.94■■■□□ 2.54
RTKN-209ENST00000484453 LMO7Q8WWI1 1683 aa30.94■■■□□ 2.54
RTKN-209ENST00000484453 GLI3P10071 1580 aa30.94■■■□□ 2.54
RTKN-209ENST00000484453 GJD4Q96KN9 370 aaPredicted RBP30.94■■■□□ 2.54
RTKN-209ENST00000484453 POLR3GLQ9BT43 218 aa30.94■■■□□ 2.54
RTKN-209ENST00000484453 CHRNA2Q15822 529 aa30.93■■■□□ 2.54
RTKN-209ENST00000484453 BTG4Q9NY30 223 aa30.93■■■□□ 2.54
RTKN-209ENST00000484453 GCP02774 474 aa30.92■■■□□ 2.54
RTKN-209ENST00000484453 NME9Q86XW9 330 aa30.9■■■□□ 2.54
RTKN-209ENST00000484453 COL18A1P39060 1754 aa30.89■■■□□ 2.54
RTKN-209ENST00000484453 CPDO75976 1380 aa30.89■■■□□ 2.54
RTKN-209ENST00000484453 BRWD3Q6RI45 1802 aa30.89■■■□□ 2.53
RTKN-209ENST00000484453 ZBTB7CA1YPR0 619 aa30.88■■■□□ 2.53
RTKN-209ENST00000484453 ZRANB1Q9UGI0 708 aa30.88■■■□□ 2.53
RTKN-209ENST00000484453 CCDC9Q9Y3X0 531 aaKnown RBP30.88■■■□□ 2.53
RTKN-209ENST00000484453 SOX12O15370 315 aa30.87■■■□□ 2.53
RTKN-209ENST00000484453 NFAT5O94916 1531 aa30.87■■■□□ 2.53
RTKN-209ENST00000484453 USP31Q70CQ4 1352 aa30.86■■■□□ 2.53
RTKN-209ENST00000484453 CAMTA1Q9Y6Y1 1673 aa30.85■■■□□ 2.53
RTKN-209ENST00000484453 VPS72Q15906 364 aa30.84■■■□□ 2.53
RTKN-209ENST00000484453 KCNH5Q8NCM2 988 aa30.84■■■□□ 2.53
RTKN-209ENST00000484453 OVOS2A0A0J9YW53 1432 aa30.81■■■□□ 2.52
RTKN-209ENST00000484453 OVOS2Q6IE36 1432 aa30.81■■■□□ 2.52
RTKN-209ENST00000484453 STRN4Q9NRL3 753 aa30.81■■■□□ 2.52
RTKN-209ENST00000484453 ANKRD26Q9UPS8 1709 aa30.78■■■□□ 2.52
RTKN-209ENST00000484453 NSD3Q9BZ95 1437 aa30.77■■■□□ 2.52
RTKN-209ENST00000484453 COL5A2P05997 1499 aaPredicted RBP30.76■■■□□ 2.52
RTKN-209ENST00000484453 EVA1CP58658 441 aa30.76■■■□□ 2.51
RTKN-209ENST00000484453 AATKQ6ZMQ8 1374 aa30.76■■■□□ 2.51
RTKN-209ENST00000484453 C11orf95C9JLR9 678 aaPredicted RBP30.75■■■□□ 2.51
RTKN-209ENST00000484453 WNK3Q9BYP7 1800 aa30.75■■■□□ 2.51
RTKN-209ENST00000484453 ARHGEF25Q86VW2 580 aa30.74■■■□□ 2.51
RTKN-209ENST00000484453 SEPT12Q8IYM1 358 aa30.74■■■□□ 2.51
RTKN-209ENST00000484453 COG3Q96JB2 828 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms