RNA–Protein interactions for RNA: ENST00000483561.2

DENND4B-209, Transcript of DENN domain containing 4B, humanhuman

TSL 4

Gene DENND4B, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-209ENST00000483561 TONSLQ96HA7 1378 aa33.02■■■□□ 2.88
DENND4B-209ENST00000483561 ACEP12821 1306 aa33.02■■■□□ 2.88
DENND4B-209ENST00000483561 POLR3AO14802 1390 aaPredicted RBP32.99■■■□□ 2.87
DENND4B-209ENST00000483561 PLEKHG3A1L390 1219 aa32.98■■■□□ 2.87
DENND4B-209ENST00000483561 UNC5CLQ8IV45 518 aa32.97■■■□□ 2.87
DENND4B-209ENST00000483561 NWD2Q9ULI1 1742 aa32.97■■■□□ 2.87
DENND4B-209ENST00000483561 PPIP5K1Q6PFW1 1433 aa32.96■■■□□ 2.87
DENND4B-209ENST00000483561 UPF1Q92900 1129 aaKnown RBP eCLIP32.95■■■□□ 2.87
DENND4B-209ENST00000483561 FAM83GA6ND36 823 aa32.94■■■□□ 2.86
DENND4B-209ENST00000483561 GLI3P10071 1580 aa32.93■■■□□ 2.86
DENND4B-209ENST00000483561 GJD4Q96KN9 370 aaPredicted RBP32.93■■■□□ 2.86
DENND4B-209ENST00000483561 NUTM2GQ5VZR2 741 aa32.92■■■□□ 2.86
DENND4B-209ENST00000483561 PHRF1Q9P1Y6 1649 aaKnown RBP32.91■■■□□ 2.86
DENND4B-209ENST00000483561 RALGAPBQ86X10 1494 aa32.91■■■□□ 2.86
DENND4B-209ENST00000483561 EVC2Q86UK5 1308 aa32.9■■■□□ 2.86
DENND4B-209ENST00000483561 NRAPQ86VF7 1730 aa32.89■■■□□ 2.86
DENND4B-209ENST00000483561 CARD11Q9BXL7 1154 aa32.89■■■□□ 2.86
DENND4B-209ENST00000483561 COL14A1Q05707 1796 aaKnown RBP32.88■■■□□ 2.85
DENND4B-209ENST00000483561 CABP1Q9NZU7 370 aa32.88■■■□□ 2.85
DENND4B-209ENST00000483561 BRWD3Q6RI45 1802 aa32.84■■■□□ 2.85
DENND4B-209ENST00000483561 VPS72Q15906 364 aa32.83■■■□□ 2.85
DENND4B-209ENST00000483561 BTG4Q9NY30 223 aa32.82■■■□□ 2.84
DENND4B-209ENST00000483561 ABTB2Q8N961 1025 aa32.81■■■□□ 2.84
DENND4B-209ENST00000483561 CCDC9Q9Y3X0 531 aaKnown RBP32.81■■■□□ 2.84
DENND4B-209ENST00000483561 AKAP12Q02952 1782 aa32.79■■■□□ 2.84
DENND4B-209ENST00000483561 PRDM11Q9NQV5 511 aa32.79■■■□□ 2.84
DENND4B-209ENST00000483561 USP6P35125 1406 aa32.78■■■□□ 2.84
DENND4B-209ENST00000483561 KIAA0232Q92628 1395 aa32.78■■■□□ 2.84
DENND4B-209ENST00000483561 NRKQ7Z2Y5 1582 aa32.78■■■□□ 2.84
DENND4B-209ENST00000483561 ZC3H6P61129 1189 aaKnown RBP32.77■■■□□ 2.84
DENND4B-209ENST00000483561 ATAD2Q6PL18 1390 aa32.76■■■□□ 2.83
DENND4B-209ENST00000483561 CHRNA2Q15822 529 aa32.76■■■□□ 2.83
DENND4B-209ENST00000483561 PCGF6Q9BYE7 350 aa32.76■■■□□ 2.83
DENND4B-209ENST00000483561 SBNO2Q9Y2G9 1366 aa32.74■■■□□ 2.83
DENND4B-209ENST00000483561 USP19O94966 1318 aa32.73■■■□□ 2.83
DENND4B-209ENST00000483561 PIK3C2AO00443 1686 aa32.72■■■□□ 2.83
DENND4B-209ENST00000483561 BRD4O60885 1362 aaPredicted RBP32.71■■■□□ 2.83
DENND4B-209ENST00000483561 SSH2Q76I76 1423 aa32.71■■■□□ 2.83
DENND4B-209ENST00000483561 NLRP13Q86W25 1043 aa32.7■■■□□ 2.83
DENND4B-209ENST00000483561 SEPT12Q8IYM1 358 aa32.7■■■□□ 2.83
DENND4B-209ENST00000483561 MON2Q7Z3U7 1717 aa32.66■■■□□ 2.82
DENND4B-209ENST00000483561 NLRP6P59044 892 aa32.66■■■□□ 2.82
DENND4B-209ENST00000483561 ONECUT3O60422 494 aaPredicted RBP32.65■■■□□ 2.82
DENND4B-209ENST00000483561 GCP02774 474 aa32.65■■■□□ 2.82
DENND4B-209ENST00000483561 FAM98CQ17RN3 349 aaKnown RBP32.65■■■□□ 2.82
DENND4B-209ENST00000483561 CPSF1Q10570 1443 aaKnown RBP32.64■■■□□ 2.82
DENND4B-209ENST00000483561 SPATA31A5Q5VU36 1347 aa32.64■■■□□ 2.82
DENND4B-209ENST00000483561 SPATA31A7Q8IWB4 1347 aa32.64■■■□□ 2.82
DENND4B-209ENST00000483561 LMO7Q8WWI1 1683 aa32.64■■■□□ 2.82
DENND4B-209ENST00000483561 STRN4Q9NRL3 753 aa32.64■■■□□ 2.82
DENND4B-209ENST00000483561 TTC21BQ7Z4L5 1316 aa32.63■■■□□ 2.81
DENND4B-209ENST00000483561 ZNF692Q9BU19 519 aaPredicted RBP32.63■■■□□ 2.81
DENND4B-209ENST00000483561 CAMTA1Q9Y6Y1 1673 aa32.62■■■□□ 2.81
DENND4B-209ENST00000483561 SLIT3O75094 1523 aa32.62■■■□□ 2.81
DENND4B-209ENST00000483561 CPDO75976 1380 aa32.62■■■□□ 2.81
DENND4B-209ENST00000483561 ST20-MTHFSA0A0A6YYL1 179 aa32.62■■■□□ 2.81
DENND4B-209ENST00000483561 A0A0G2JS52 829 aa32.62■■■□□ 2.81
DENND4B-209ENST00000483561 MYT1Q01538 1121 aa32.62■■■□□ 2.81
DENND4B-209ENST00000483561 KTN1Q86UP2 1357 aaKnown RBP32.6■■■□□ 2.81
DENND4B-209ENST00000483561 TMC1Q8TDI8 760 aa32.59■■■□□ 2.81
DENND4B-209ENST00000483561 TESK2Q96S53 571 aa32.59■■■□□ 2.81
DENND4B-209ENST00000483561 CD163L1Q9NR16 1453 aa32.59■■■□□ 2.81
DENND4B-209ENST00000483561 ZBTB7CA1YPR0 619 aa32.58■■■□□ 2.81
DENND4B-209ENST00000483561 SLC12A5Q9H2X9 1139 aa32.57■■■□□ 2.8
DENND4B-209ENST00000483561 KRT27Q7Z3Y8 459 aa32.56■■■□□ 2.8
DENND4B-209ENST00000483561 THSD7AQ9UPZ6 1657 aa32.56■■■□□ 2.8
DENND4B-209ENST00000483561 SPATA31A1Q5TZJ5 1347 aa32.55■■■□□ 2.8
DENND4B-209ENST00000483561 EVA1CP58658 441 aa32.55■■■□□ 2.8
DENND4B-209ENST00000483561 TTC21AQ8NDW8 1320 aa32.54■■■□□ 2.8
DENND4B-209ENST00000483561 CLSPNQ9HAW4 1339 aa32.53■■■□□ 2.8
DENND4B-209ENST00000483561 COL18A1P39060 1754 aa32.53■■■□□ 2.8
DENND4B-209ENST00000483561 EP400Q96L91 3159 aa32.53■■■□□ 2.8
DENND4B-209ENST00000483561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.52■■■□□ 2.8
DENND4B-209ENST00000483561 ZRANB1Q9UGI0 708 aa32.52■■■□□ 2.8
DENND4B-209ENST00000483561 RGPD5Q99666 1765 aa32.52■■■□□ 2.8
DENND4B-209ENST00000483561 USP47Q96K76 1375 aa32.51■■■□□ 2.79
DENND4B-209ENST00000483561 SOX12O15370 315 aa32.51■■■□□ 2.79
DENND4B-209ENST00000483561 LARP1Q6PKG0 1096 aaKnown RBP32.51■■■□□ 2.79
DENND4B-209ENST00000483561 USP35Q9P2H5 1018 aa32.51■■■□□ 2.79
DENND4B-209ENST00000483561 COL5A2P05997 1499 aaPredicted RBP32.48■■■□□ 2.79
DENND4B-209ENST00000483561 PUS7Q96PZ0 661 aaKnown RBP32.48■■■□□ 2.79
DENND4B-209ENST00000483561 FAM182BQ5T319 152 aa32.47■■■□□ 2.79
DENND4B-209ENST00000483561 HDGFL2Q7Z4V5 671 aaPredicted RBP32.47■■■□□ 2.79
DENND4B-209ENST00000483561 TIMELESSQ9UNS1 1208 aa32.47■■■□□ 2.79
DENND4B-209ENST00000483561 A0A1W2PP64 1363 aa32.46■■■□□ 2.79
DENND4B-209ENST00000483561 NME9Q86XW9 330 aa32.46■■■□□ 2.79
DENND4B-209ENST00000483561 CCDC125Q86Z20 511 aa32.46■■■□□ 2.79
DENND4B-209ENST00000483561 AATKQ6ZMQ8 1374 aa32.45■■■□□ 2.79
DENND4B-209ENST00000483561 BLMP54132 1417 aaPredicted RBP32.45■■■□□ 2.79
DENND4B-209ENST00000483561 USP54Q70EL1 1684 aa32.45■■■□□ 2.79
DENND4B-209ENST00000483561 NFAT5O94916 1531 aa32.45■■■□□ 2.78
DENND4B-209ENST00000483561 CCER1Q8TC90 406 aaPredicted RBP32.43■■■□□ 2.78
DENND4B-209ENST00000483561 ARHGEF25Q86VW2 580 aa32.42■■■□□ 2.78
DENND4B-209ENST00000483561 KCNH5Q8NCM2 988 aa32.42■■■□□ 2.78
DENND4B-209ENST00000483561 TERF2IPQ9NYB0 399 aa32.42■■■□□ 2.78
DENND4B-209ENST00000483561 AXIN2Q9Y2T1 843 aa32.42■■■□□ 2.78
DENND4B-209ENST00000483561 USP31Q70CQ4 1352 aa32.41■■■□□ 2.78
DENND4B-209ENST00000483561 EDC4Q6P2E9 1401 aaKnown RBP32.41■■■□□ 2.78
DENND4B-209ENST00000483561 BARGINQ6ZT62 677 aa32.39■■■□□ 2.78
DENND4B-209ENST00000483561 DEFB132Q7Z7B7 95 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms