RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
SND1-210ENST00000483503 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
SND1-210ENST00000483503 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
SND1-210ENST00000483503 ITSN1Q15811 1721 aa15.62■□□□□ 0.09
SND1-210ENST00000483503 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
SND1-210ENST00000483503 IQSEC2Q5JU85 1478 aa15.61■□□□□ 0.09
SND1-210ENST00000483503 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
SND1-210ENST00000483503 WDR63Q8IWG1 891 aa15.61■□□□□ 0.09
SND1-210ENST00000483503 AKAP12Q02952 1782 aa15.61■□□□□ 0.09
SND1-210ENST00000483503 PNPLA6Q8IY17 1366 aa15.61■□□□□ 0.09
SND1-210ENST00000483503 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
SND1-210ENST00000483503 ADAMTSL3P82987 1691 aa15.6■□□□□ 0.09
SND1-210ENST00000483503 COL3A1P02461 1466 aaPredicted RBP15.6■□□□□ 0.09
SND1-210ENST00000483503 NKTRP30414 1462 aaKnown RBP15.6■□□□□ 0.09
SND1-210ENST00000483503 PLEKHG3A1L390 1219 aa15.6■□□□□ 0.09
SND1-210ENST00000483503 DIAPH1O60610 1272 aaKnown RBP15.6■□□□□ 0.09
SND1-210ENST00000483503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.6■□□□□ 0.09
SND1-210ENST00000483503 TCP11L2Q8N4U5 519 aa15.6■□□□□ 0.09
SND1-210ENST00000483503 CCDC136Q96JN2 1154 aa15.6■□□□□ 0.09
SND1-210ENST00000483503 AATKQ6ZMQ8 1374 aa15.6■□□□□ 0.09
SND1-210ENST00000483503 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.6■□□□□ 0.09
SND1-210ENST00000483503 SETD1BQ9UPS6 1966 aaKnown RBP15.59■□□□□ 0.09
SND1-210ENST00000483503 ANKLE2Q86XL3 938 aa15.59■□□□□ 0.09
SND1-210ENST00000483503 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
SND1-210ENST00000483503 COG3Q96JB2 828 aa15.59■□□□□ 0.09
SND1-210ENST00000483503 TSHZ2Q9NRE2 1034 aa15.59■□□□□ 0.09
SND1-210ENST00000483503 TOPAZ1Q8N9V7 1692 aa15.58■□□□□ 0.08
SND1-210ENST00000483503 B4GALNT3Q6L9W6 998 aa15.58■□□□□ 0.08
SND1-210ENST00000483503 XRN1Q8IZH2 1706 aaKnown RBP15.57■□□□□ 0.08
SND1-210ENST00000483503 U2SURPO15042 1029 aaKnown RBP15.57■□□□□ 0.08
SND1-210ENST00000483503 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
SND1-210ENST00000483503 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
SND1-210ENST00000483503 MAPK8IP3Q9UPT6 1336 aa15.57■□□□□ 0.08
SND1-210ENST00000483503 NEFMP07197 916 aa15.56■□□□□ 0.08
SND1-210ENST00000483503 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
SND1-210ENST00000483503 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
SND1-210ENST00000483503 CDK12Q9NYV4 1490 aaPredicted RBP15.54■□□□□ 0.08
SND1-210ENST00000483503 ANKARQ7Z5J8 1434 aa15.54■□□□□ 0.08
SND1-210ENST00000483503 FCHSD2O94868 740 aa15.54■□□□□ 0.08
SND1-210ENST00000483503 ACEP12821 1306 aa15.53■□□□□ 0.08
SND1-210ENST00000483503 TTC21BQ7Z4L5 1316 aa15.53■□□□□ 0.08
SND1-210ENST00000483503 TTC21AQ8NDW8 1320 aa15.53■□□□□ 0.08
SND1-210ENST00000483503 NME9Q86XW9 330 aa15.53■□□□□ 0.08
SND1-210ENST00000483503 EXOC6Q8TAG9 804 aa15.52■□□□□ 0.08
SND1-210ENST00000483503 PLEKHF1Q96S99 279 aa15.52■□□□□ 0.08
SND1-210ENST00000483503 USP6P35125 1406 aa15.51■□□□□ 0.07
SND1-210ENST00000483503 IL16Q14005 1332 aa15.51■□□□□ 0.07
SND1-210ENST00000483503 NEUROD2Q15784 382 aa15.51■□□□□ 0.07
SND1-210ENST00000483503 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
SND1-210ENST00000483503 NRKQ7Z2Y5 1582 aa15.5■□□□□ 0.07
SND1-210ENST00000483503 CT47B1P0C2W7 299 aaPredicted RBP15.5■□□□□ 0.07
SND1-210ENST00000483503 TMPOP42166 694 aaKnown RBP15.5■□□□□ 0.07
SND1-210ENST00000483503 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
SND1-210ENST00000483503 RRP7AQ9Y3A4 280 aaKnown RBP15.5■□□□□ 0.07
SND1-210ENST00000483503 NCKAP5LQ9HCH0 1330 aa15.49■□□□□ 0.07
SND1-210ENST00000483503 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
SND1-210ENST00000483503 KCNA6P17658 529 aa15.48■□□□□ 0.07
SND1-210ENST00000483503 CHD2O14647 1828 aaKnown RBP15.47■□□□□ 0.07
SND1-210ENST00000483503 OVOS2A0A0J9YW53 1432 aa15.47■□□□□ 0.07
SND1-210ENST00000483503 PLIN1O60240 522 aa15.47■□□□□ 0.07
SND1-210ENST00000483503 OVOS2Q6IE36 1432 aa15.47■□□□□ 0.07
SND1-210ENST00000483503 NGDNQ8NEJ9 315 aaKnown RBP15.47■□□□□ 0.07
SND1-210ENST00000483503 CRBNQ96SW2 442 aa15.47■□□□□ 0.07
SND1-210ENST00000483503 SSH2Q76I76 1423 aa15.46■□□□□ 0.07
SND1-210ENST00000483503 IL13P35225 146 aa15.46■□□□□ 0.07
SND1-210ENST00000483503 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
SND1-210ENST00000483503 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.07
SND1-210ENST00000483503 EMILIN1Q9Y6C2 1016 aa15.46■□□□□ 0.07
SND1-210ENST00000483503 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
SND1-210ENST00000483503 FMN2Q9NZ56 1722 aa15.46■□□□□ 0.06
SND1-210ENST00000483503 NPHP4O75161 1426 aaPredicted RBP15.45■□□□□ 0.06
SND1-210ENST00000483503 RIPK4P57078 832 aa15.45■□□□□ 0.06
SND1-210ENST00000483503 PDE3AQ14432 1141 aa15.45■□□□□ 0.06
SND1-210ENST00000483503 RSPH6AQ9H0K4 717 aa15.45■□□□□ 0.06
SND1-210ENST00000483503 ZRANB1Q9UGI0 708 aa15.45■□□□□ 0.06
SND1-210ENST00000483503 NUTM2FA1L443 756 aa15.44■□□□□ 0.06
SND1-210ENST00000483503 LRRC7Q96NW7 1537 aa15.43■□□□□ 0.06
SND1-210ENST00000483503 NALCNQ8IZF0 1738 aa15.43■□□□□ 0.06
SND1-210ENST00000483503 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
SND1-210ENST00000483503 PRKAR2BP31323 418 aa15.43■□□□□ 0.06
SND1-210ENST00000483503 LMOD3Q0VAK6 560 aa15.43■□□□□ 0.06
SND1-210ENST00000483503 AAMPQ13685 434 aa15.43■□□□□ 0.06
SND1-210ENST00000483503 NFE2L2Q16236 605 aa15.43■□□□□ 0.06
SND1-210ENST00000483503 TRIM35Q9UPQ4 493 aa15.42■□□□□ 0.06
SND1-210ENST00000483503 MS4A1P11836 297 aa15.41■□□□□ 0.06
SND1-210ENST00000483503 RARSP54136 660 aaKnown RBP15.41■□□□□ 0.06
SND1-210ENST00000483503 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
SND1-210ENST00000483503 PMFBP1Q8TBY8 1022 aa15.41■□□□□ 0.06
SND1-210ENST00000483503 BCAR3O75815 825 aa15.4■□□□□ 0.06
SND1-210ENST00000483503 RBM19Q9Y4C8 960 aaKnown RBP15.4■□□□□ 0.06
SND1-210ENST00000483503 ADGRL3Q9HAR2 1447 aa15.4■□□□□ 0.06
SND1-210ENST00000483503 FBLN1P23142 703 aa15.39■□□□□ 0.05
SND1-210ENST00000483503 C20orf194Q5TEA3 1177 aa15.39■□□□□ 0.05
SND1-210ENST00000483503 FANCIQ9NVI1 1328 aa15.39■□□□□ 0.05
SND1-210ENST00000483503 KIF24Q5T7B8 1368 aa15.38■□□□□ 0.05
SND1-210ENST00000483503 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
SND1-210ENST00000483503 RGPD8O14715 1765 aaPredicted RBP15.38■□□□□ 0.05
SND1-210ENST00000483503 USP54Q70EL1 1684 aa15.38■□□□□ 0.05
SND1-210ENST00000483503 SBNO1A3KN83 1393 aa15.37■□□□□ 0.05
SND1-210ENST00000483503 HMOX1P09601 288 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms