RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 PAK3O75914 559 aaPredicted RBP28.2■■■□□ 2.1
R3HDM1-215ENST00000483021 CDK19Q9BWU1 502 aa28.19■■■□□ 2.1
R3HDM1-215ENST00000483021 PHRF1Q9P1Y6 1649 aaKnown RBP28.18■■■□□ 2.1
R3HDM1-215ENST00000483021 SEPT12Q8IYM1 358 aa28.17■■■□□ 2.1
R3HDM1-215ENST00000483021 POLR3AO14802 1390 aaPredicted RBP28.16■■■□□ 2.1
R3HDM1-215ENST00000483021 ONECUT3O60422 494 aaPredicted RBP28.16■■■□□ 2.1
R3HDM1-215ENST00000483021 BLMP54132 1417 aaPredicted RBP28.16■■■□□ 2.1
R3HDM1-215ENST00000483021 QRICH2Q9H0J4 1663 aa28.16■■■□□ 2.1
R3HDM1-215ENST00000483021 NBPF1Q3BBV0 1214 aa28.15■■■□□ 2.1
R3HDM1-215ENST00000483021 BTG4Q9NY30 223 aa28.15■■■□□ 2.1
R3HDM1-215ENST00000483021 CCDC61Q9Y6R9 512 aa28.15■■■□□ 2.1
R3HDM1-215ENST00000483021 CENPJQ9HC77 1338 aaPredicted RBP28.12■■■□□ 2.09
R3HDM1-215ENST00000483021 ACEP12821 1306 aa28.11■■■□□ 2.09
R3HDM1-215ENST00000483021 PLEKHG3A1L390 1219 aa28.1■■■□□ 2.09
R3HDM1-215ENST00000483021 PRDM11Q9NQV5 511 aa28.1■■■□□ 2.09
R3HDM1-215ENST00000483021 TRPM1Q7Z4N2 1603 aa28.1■■■□□ 2.09
R3HDM1-215ENST00000483021 KRT27Q7Z3Y8 459 aa28.09■■■□□ 2.09
R3HDM1-215ENST00000483021 NBPF8Q3BBV2 869 aa28.08■■■□□ 2.09
R3HDM1-215ENST00000483021 SRCAPQ6ZRS2 3230 aa28.07■■■□□ 2.08
R3HDM1-215ENST00000483021 A0A0G2JS52 829 aa28.07■■■□□ 2.08
R3HDM1-215ENST00000483021 MYT1Q01538 1121 aa28.07■■■□□ 2.08
R3HDM1-215ENST00000483021 ZRANB1Q9UGI0 708 aa28.07■■■□□ 2.08
R3HDM1-215ENST00000483021 SRPK2P78362 688 aaKnown RBP28.06■■■□□ 2.08
R3HDM1-215ENST00000483021 L3MBTL2Q969R5 705 aa28.06■■■□□ 2.08
R3HDM1-215ENST00000483021 KIAA0232Q92628 1395 aa28.06■■■□□ 2.08
R3HDM1-215ENST00000483021 PPIP5K1Q6PFW1 1433 aa28.06■■■□□ 2.08
R3HDM1-215ENST00000483021 NRKQ7Z2Y5 1582 aa28.06■■■□□ 2.08
R3HDM1-215ENST00000483021 SF3B2Q13435 895 aaKnown RBP28.05■■■□□ 2.08
R3HDM1-215ENST00000483021 FAM98CQ17RN3 349 aaKnown RBP28.05■■■□□ 2.08
R3HDM1-215ENST00000483021 THSD7AQ9UPZ6 1657 aa28.04■■■□□ 2.08
R3HDM1-215ENST00000483021 SPATA31A5Q5VU36 1347 aa28.04■■■□□ 2.08
R3HDM1-215ENST00000483021 SPATA31A7Q8IWB4 1347 aa28.04■■■□□ 2.08
R3HDM1-215ENST00000483021 BRD4O60885 1362 aaPredicted RBP28.01■■■□□ 2.07
R3HDM1-215ENST00000483021 ABTB2Q8N961 1025 aa28■■■□□ 2.07
R3HDM1-215ENST00000483021 NUTM2GQ5VZR2 741 aa27.99■■■□□ 2.07
R3HDM1-215ENST00000483021 SIN3AQ96ST3 1273 aa27.99■■■□□ 2.07
R3HDM1-215ENST00000483021 CABP2Q9NPB3 220 aa27.99■■■□□ 2.07
R3HDM1-215ENST00000483021 RGPD1P0DJD0 1748 aa27.98■■■□□ 2.07
R3HDM1-215ENST00000483021 USP19O94966 1318 aa27.97■■■□□ 2.07
R3HDM1-215ENST00000483021 ZC3H6P61129 1189 aaKnown RBP27.97■■■□□ 2.07
R3HDM1-215ENST00000483021 CHRNA2Q15822 529 aa27.97■■■□□ 2.07
R3HDM1-215ENST00000483021 ROCK2O75116 1388 aaKnown RBP27.97■■■□□ 2.07
R3HDM1-215ENST00000483021 LMO7Q8WWI1 1683 aa27.96■■■□□ 2.07
R3HDM1-215ENST00000483021 CPDO75976 1380 aa27.96■■■□□ 2.07
R3HDM1-215ENST00000483021 SPATA31A1Q5TZJ5 1347 aa27.95■■■□□ 2.07
R3HDM1-215ENST00000483021 DEFB132Q7Z7B7 95 aa27.95■■■□□ 2.06
R3HDM1-215ENST00000483021 EVC2Q86UK5 1308 aa27.94■■■□□ 2.06
R3HDM1-215ENST00000483021 NEUROD1Q13562 356 aa27.94■■■□□ 2.06
R3HDM1-215ENST00000483021 NLRP13Q86W25 1043 aa27.94■■■□□ 2.06
R3HDM1-215ENST00000483021 USP6P35125 1406 aa27.93■■■□□ 2.06
R3HDM1-215ENST00000483021 STRN4Q9NRL3 753 aa27.93■■■□□ 2.06
R3HDM1-215ENST00000483021 SSH2Q76I76 1423 aa27.92■■■□□ 2.06
R3HDM1-215ENST00000483021 CAMTA1Q9Y6Y1 1673 aa27.91■■■□□ 2.06
R3HDM1-215ENST00000483021 BAG6P46379 1132 aa27.9■■■□□ 2.06
R3HDM1-215ENST00000483021 CABP1Q9NZU7 370 aa27.9■■■□□ 2.06
R3HDM1-215ENST00000483021 EVA1CP58658 441 aa27.89■■■□□ 2.06
R3HDM1-215ENST00000483021 AKAP12Q02952 1782 aa27.88■■■□□ 2.05
R3HDM1-215ENST00000483021 TNS1Q9HBL0 1735 aaKnown RBP27.88■■■□□ 2.05
R3HDM1-215ENST00000483021 PIK3C2AO00443 1686 aa27.87■■■□□ 2.05
R3HDM1-215ENST00000483021 SLIT3O75094 1523 aa27.87■■■□□ 2.05
R3HDM1-215ENST00000483021 GCP02774 474 aa27.87■■■□□ 2.05
R3HDM1-215ENST00000483021 BARGINQ6ZT62 677 aa27.85■■■□□ 2.05
R3HDM1-215ENST00000483021 DISP2A7MBM2 1401 aa27.84■■■□□ 2.05
R3HDM1-215ENST00000483021 COL5A2P05997 1499 aaPredicted RBP27.83■■■□□ 2.05
R3HDM1-215ENST00000483021 NLRP6P59044 892 aa27.82■■■□□ 2.04
R3HDM1-215ENST00000483021 FAM182BQ5T319 152 aa27.82■■■□□ 2.04
R3HDM1-215ENST00000483021 USP35Q9P2H5 1018 aa27.82■■■□□ 2.04
R3HDM1-215ENST00000483021 LARP1Q6PKG0 1096 aaKnown RBP27.81■■■□□ 2.04
R3HDM1-215ENST00000483021 SBNO2Q9Y2G9 1366 aa27.81■■■□□ 2.04
R3HDM1-215ENST00000483021 PARP4Q9UKK3 1724 aaKnown RBP27.81■■■□□ 2.04
R3HDM1-215ENST00000483021 FAM196AQ6ZSG2 479 aa27.8■■■□□ 2.04
R3HDM1-215ENST00000483021 TCP11L2Q8N4U5 519 aa27.8■■■□□ 2.04
R3HDM1-215ENST00000483021 ZNF692Q9BU19 519 aaPredicted RBP27.8■■■□□ 2.04
R3HDM1-215ENST00000483021 THRAP3Q9Y2W1 955 aaKnown RBP27.8■■■□□ 2.04
R3HDM1-215ENST00000483021 AATKQ6ZMQ8 1374 aa27.78■■■□□ 2.04
R3HDM1-215ENST00000483021 MON2Q7Z3U7 1717 aa27.78■■■□□ 2.04
R3HDM1-215ENST00000483021 CRB1P82279 1406 aa27.77■■■□□ 2.04
R3HDM1-215ENST00000483021 COL18A1P39060 1754 aa27.76■■■□□ 2.03
R3HDM1-215ENST00000483021 PDE3BQ13370 1112 aa27.76■■■□□ 2.03
R3HDM1-215ENST00000483021 LRP5O75197 1615 aa27.76■■■□□ 2.03
R3HDM1-215ENST00000483021 TONSLQ96HA7 1378 aa27.75■■■□□ 2.03
R3HDM1-215ENST00000483021 TTC21AQ8NDW8 1320 aa27.75■■■□□ 2.03
R3HDM1-215ENST00000483021 EN1Q05925 392 aaPredicted RBP27.75■■■□□ 2.03
R3HDM1-215ENST00000483021 CPSF1Q10570 1443 aaKnown RBP27.75■■■□□ 2.03
R3HDM1-215ENST00000483021 TTC21BQ7Z4L5 1316 aa27.74■■■□□ 2.03
R3HDM1-215ENST00000483021 ZBTB7CA1YPR0 619 aa27.73■■■□□ 2.03
R3HDM1-215ENST00000483021 CARD11Q9BXL7 1154 aa27.73■■■□□ 2.03
R3HDM1-215ENST00000483021 WNK3Q9BYP7 1800 aa27.72■■■□□ 2.03
R3HDM1-215ENST00000483021 KTN1Q86UP2 1357 aaKnown RBP27.72■■■□□ 2.03
R3HDM1-215ENST00000483021 TRIM37O94972 964 aa27.71■■■□□ 2.03
R3HDM1-215ENST00000483021 KCNH5Q8NCM2 988 aa27.71■■■□□ 2.03
R3HDM1-215ENST00000483021 PARD3Q8TEW0 1356 aa27.71■■■□□ 2.03
R3HDM1-215ENST00000483021 USP54Q70EL1 1684 aa27.69■■■□□ 2.02
R3HDM1-215ENST00000483021 LRRC37A3O60309 1634 aa27.69■■■□□ 2.02
R3HDM1-215ENST00000483021 RREB1Q92766 1687 aa27.68■■■□□ 2.02
R3HDM1-215ENST00000483021 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
R3HDM1-215ENST00000483021 ABCC6O95255 1503 aa27.67■■■□□ 2.02
R3HDM1-215ENST00000483021 C11orf95C9JLR9 678 aaPredicted RBP27.67■■■□□ 2.02
R3HDM1-215ENST00000483021 NFAT5O94916 1531 aa27.67■■■□□ 2.02
R3HDM1-215ENST00000483021 PSDA5PKW4 1024 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms