RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 VGFO15240 615 aaPredicted RBP13.57□□□□□ -0.24
HLA-B-253ENST00000481849 RNF25Q96BH1 459 aaPredicted RBP13.57□□□□□ -0.24
HLA-B-253ENST00000481849 NAIPQ13075 1403 aa13.56□□□□□ -0.24
HLA-B-253ENST00000481849 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
HLA-B-253ENST00000481849 C19orf44Q9H6X5 657 aa13.56□□□□□ -0.24
HLA-B-253ENST00000481849 LRP6O75581 1613 aa13.56□□□□□ -0.24
HLA-B-253ENST00000481849 PIK3R4Q99570 1358 aa13.56□□□□□ -0.24
HLA-B-253ENST00000481849 TRPM2O94759 1503 aa13.55□□□□□ -0.24
HLA-B-253ENST00000481849 DIP2AQ14689 1571 aa13.55□□□□□ -0.24
HLA-B-253ENST00000481849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
HLA-B-253ENST00000481849 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
HLA-B-253ENST00000481849 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
HLA-B-253ENST00000481849 C1QTNF8P60827 252 aa13.54□□□□□ -0.24
HLA-B-253ENST00000481849 CHD2O14647 1828 aaKnown RBP13.54□□□□□ -0.24
HLA-B-253ENST00000481849 METP08581 1390 aa13.54□□□□□ -0.24
HLA-B-253ENST00000481849 NCOA3Q9Y6Q9 1424 aa13.54□□□□□ -0.24
HLA-B-253ENST00000481849 ATAD2Q6PL18 1390 aa13.53□□□□□ -0.24
HLA-B-253ENST00000481849 JCADQ9P266 1359 aa13.53□□□□□ -0.24
HLA-B-253ENST00000481849 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
HLA-B-253ENST00000481849 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
HLA-B-253ENST00000481849 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.25
HLA-B-253ENST00000481849 TAOK2Q9UL54 1235 aa13.52□□□□□ -0.25
HLA-B-253ENST00000481849 SPHKAPQ2M3C7 1700 aa13.51□□□□□ -0.25
HLA-B-253ENST00000481849 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
HLA-B-253ENST00000481849 PHLPP1O60346 1717 aa13.5□□□□□ -0.25
HLA-B-253ENST00000481849 SOX12O15370 315 aa13.5□□□□□ -0.25
HLA-B-253ENST00000481849 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
HLA-B-253ENST00000481849 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
HLA-B-253ENST00000481849 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
HLA-B-253ENST00000481849 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
HLA-B-253ENST00000481849 NRXN3Q9Y4C0 1643 aa13.49□□□□□ -0.25
HLA-B-253ENST00000481849 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.48□□□□□ -0.25
HLA-B-253ENST00000481849 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
HLA-B-253ENST00000481849 COL16A1Q07092 1604 aaPredicted RBP13.47□□□□□ -0.25
HLA-B-253ENST00000481849 ECM2O94769 699 aaPredicted RBP13.46□□□□□ -0.25
HLA-B-253ENST00000481849 DDX17Q92841 729 aaKnown RBP13.46□□□□□ -0.25
HLA-B-253ENST00000481849 SPATA31A6Q5VVP1 1343 aa13.45□□□□□ -0.26
HLA-B-253ENST00000481849 XRN1Q8IZH2 1706 aaKnown RBP13.45□□□□□ -0.26
HLA-B-253ENST00000481849 MST1RQ04912 1400 aa13.45□□□□□ -0.26
HLA-B-253ENST00000481849 ZNF784Q8NCA9 323 aaPredicted RBP13.44□□□□□ -0.26
HLA-B-253ENST00000481849 DCCP43146 1447 aa13.44□□□□□ -0.26
HLA-B-253ENST00000481849 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
HLA-B-253ENST00000481849 AHDC1Q5TGY3 1603 aaPredicted RBP13.43□□□□□ -0.26
HLA-B-253ENST00000481849 ADGRL3Q9HAR2 1447 aa13.43□□□□□ -0.26
HLA-B-253ENST00000481849 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
HLA-B-253ENST00000481849 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
HLA-B-253ENST00000481849 EMP3P54852 163 aa13.42□□□□□ -0.26
HLA-B-253ENST00000481849 RGL3Q3MIN7 710 aa13.42□□□□□ -0.26
HLA-B-253ENST00000481849 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
HLA-B-253ENST00000481849 ROBO2Q9HCK4 1378 aa13.42□□□□□ -0.26
HLA-B-253ENST00000481849 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
HLA-B-253ENST00000481849 MPHOSPH9Q99550 1183 aa13.4□□□□□ -0.26
HLA-B-253ENST00000481849 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
HLA-B-253ENST00000481849 HRCP23327 699 aa13.39□□□□□ -0.27
HLA-B-253ENST00000481849 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
HLA-B-253ENST00000481849 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
HLA-B-253ENST00000481849 LRRC59Q96AG4 307 aaKnown RBP13.39□□□□□ -0.27
HLA-B-253ENST00000481849 STK26Q9P289 416 aa13.39□□□□□ -0.27
HLA-B-253ENST00000481849 UTRNP46939 3433 aa13.39□□□□□ -0.27
HLA-B-253ENST00000481849 KIF1BO60333 1816 aa13.39□□□□□ -0.27
HLA-B-253ENST00000481849 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
HLA-B-253ENST00000481849 C1orf167Q5SNV9 1468 aa13.38□□□□□ -0.27
HLA-B-253ENST00000481849 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
HLA-B-253ENST00000481849 ORAI2Q96SN7 254 aa13.38□□□□□ -0.27
HLA-B-253ENST00000481849 PTCH1Q13635 1447 aa13.38□□□□□ -0.27
HLA-B-253ENST00000481849 SETD5Q9C0A6 1442 aa13.38□□□□□ -0.27
HLA-B-253ENST00000481849 BCL9LQ86UU0 1499 aa13.37□□□□□ -0.27
HLA-B-253ENST00000481849 STK25O00506 426 aa13.37□□□□□ -0.27
HLA-B-253ENST00000481849 NLRP6P59044 892 aa13.37□□□□□ -0.27
HLA-B-253ENST00000481849 RBM6P78332 1123 aaKnown RBP13.37□□□□□ -0.27
HLA-B-253ENST00000481849 SPNS2Q8IVW8 549 aa13.37□□□□□ -0.27
HLA-B-253ENST00000481849 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
HLA-B-253ENST00000481849 C8orf37Q96NL8 207 aa13.37□□□□□ -0.27
HLA-B-253ENST00000481849 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
HLA-B-253ENST00000481849 SHPRHQ149N8 1683 aa13.36□□□□□ -0.27
HLA-B-253ENST00000481849 AFF2P51816 1311 aa13.36□□□□□ -0.27
HLA-B-253ENST00000481849 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
HLA-B-253ENST00000481849 ADAMTS2O95450 1211 aa13.35□□□□□ -0.27
HLA-B-253ENST00000481849 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
HLA-B-253ENST00000481849 NUTM2FA1L443 756 aa13.34□□□□□ -0.27
HLA-B-253ENST00000481849 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
HLA-B-253ENST00000481849 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
HLA-B-253ENST00000481849 WAPLQ7Z5K2 1190 aa13.34□□□□□ -0.27
HLA-B-253ENST00000481849 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
HLA-B-253ENST00000481849 FAM205CA6NFA0 338 aa13.33□□□□□ -0.28
HLA-B-253ENST00000481849 HOXB3P14651 431 aaPredicted RBP13.33□□□□□ -0.28
HLA-B-253ENST00000481849 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.28
HLA-B-253ENST00000481849 XPCQ01831 940 aaPredicted RBP13.32□□□□□ -0.28
HLA-B-253ENST00000481849 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
HLA-B-253ENST00000481849 PPLO60437 1756 aa13.31□□□□□ -0.28
HLA-B-253ENST00000481849 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
HLA-B-253ENST00000481849 NGLY1Q96IV0 654 aa13.31□□□□□ -0.28
HLA-B-253ENST00000481849 PLEKHH1Q9ULM0 1364 aa13.31□□□□□ -0.28
HLA-B-253ENST00000481849 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
HLA-B-253ENST00000481849 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
HLA-B-253ENST00000481849 RGL2O15211 777 aa13.3□□□□□ -0.28
HLA-B-253ENST00000481849 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
HLA-B-253ENST00000481849 SOS2Q07890 1332 aaPredicted RBP13.3□□□□□ -0.28
HLA-B-253ENST00000481849 LRPPRCP42704 1394 aaKnown RBP13.3□□□□□ -0.28
HLA-B-253ENST00000481849 HS3ST6Q96QI5 342 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms