RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 CENPJQ9HC77 1338 aaPredicted RBP31.97■■■□□ 2.71
GPCPD1-206ENST00000481690 COL14A1Q05707 1796 aaKnown RBP31.93■■■□□ 2.7
GPCPD1-206ENST00000481690 NRAPQ86VF7 1730 aa31.92■■■□□ 2.7
GPCPD1-206ENST00000481690 FAM83GA6ND36 823 aa31.92■■■□□ 2.7
GPCPD1-206ENST00000481690 CCDC9Q9Y3X0 531 aaKnown RBP31.92■■■□□ 2.7
GPCPD1-206ENST00000481690 CCDC61Q9Y6R9 512 aa31.92■■■□□ 2.7
GPCPD1-206ENST00000481690 SRPK2P78362 688 aaKnown RBP31.91■■■□□ 2.7
GPCPD1-206ENST00000481690 BRWD3Q6RI45 1802 aa31.91■■■□□ 2.7
GPCPD1-206ENST00000481690 ACEP12821 1306 aa31.9■■■□□ 2.7
GPCPD1-206ENST00000481690 VPS72Q15906 364 aa31.89■■■□□ 2.7
GPCPD1-206ENST00000481690 POLR3AO14802 1390 aaPredicted RBP31.89■■■□□ 2.7
GPCPD1-206ENST00000481690 PHRF1Q9P1Y6 1649 aaKnown RBP31.89■■■□□ 2.7
GPCPD1-206ENST00000481690 PPIP5K1Q6PFW1 1433 aa31.86■■■□□ 2.69
GPCPD1-206ENST00000481690 ROCK2O75116 1388 aaKnown RBP31.86■■■□□ 2.69
GPCPD1-206ENST00000481690 CABP2Q9NPB3 220 aa31.86■■■□□ 2.69
GPCPD1-206ENST00000481690 PLEKHG3A1L390 1219 aa31.85■■■□□ 2.69
GPCPD1-206ENST00000481690 NBPF8Q3BBV2 869 aa31.85■■■□□ 2.69
GPCPD1-206ENST00000481690 BTG4Q9NY30 223 aa31.85■■■□□ 2.69
GPCPD1-206ENST00000481690 NUTM2GQ5VZR2 741 aa31.84■■■□□ 2.69
GPCPD1-206ENST00000481690 PRDM11Q9NQV5 511 aa31.81■■■□□ 2.68
GPCPD1-206ENST00000481690 SEPT12Q8IYM1 358 aa31.8■■■□□ 2.68
GPCPD1-206ENST00000481690 A0A0G2JS52 829 aa31.78■■■□□ 2.68
GPCPD1-206ENST00000481690 MYT1Q01538 1121 aa31.78■■■□□ 2.68
GPCPD1-206ENST00000481690 KIAA0232Q92628 1395 aa31.77■■■□□ 2.68
GPCPD1-206ENST00000481690 ABTB2Q8N961 1025 aa31.76■■■□□ 2.67
GPCPD1-206ENST00000481690 EVC2Q86UK5 1308 aa31.75■■■□□ 2.67
GPCPD1-206ENST00000481690 NRKQ7Z2Y5 1582 aa31.75■■■□□ 2.67
GPCPD1-206ENST00000481690 ZC3H6P61129 1189 aaKnown RBP31.74■■■□□ 2.67
GPCPD1-206ENST00000481690 CHRNA2Q15822 529 aa31.73■■■□□ 2.67
GPCPD1-206ENST00000481690 TONSLQ96HA7 1378 aa31.72■■■□□ 2.67
GPCPD1-206ENST00000481690 FAM98CQ17RN3 349 aaKnown RBP31.72■■■□□ 2.67
GPCPD1-206ENST00000481690 CABP1Q9NZU7 370 aa31.72■■■□□ 2.67
GPCPD1-206ENST00000481690 EP400Q96L91 3159 aa31.71■■■□□ 2.67
GPCPD1-206ENST00000481690 ONECUT3O60422 494 aaPredicted RBP31.71■■■□□ 2.67
GPCPD1-206ENST00000481690 TRIM26Q12899 539 aaPredicted RBP31.71■■■□□ 2.67
GPCPD1-206ENST00000481690 CCDC125Q86Z20 511 aa31.71■■■□□ 2.67
GPCPD1-206ENST00000481690 USP6P35125 1406 aa31.68■■■□□ 2.66
GPCPD1-206ENST00000481690 KRT27Q7Z3Y8 459 aa31.68■■■□□ 2.66
GPCPD1-206ENST00000481690 SPATA31A5Q5VU36 1347 aa31.68■■■□□ 2.66
GPCPD1-206ENST00000481690 SPATA31A7Q8IWB4 1347 aa31.68■■■□□ 2.66
GPCPD1-206ENST00000481690 STRN4Q9NRL3 753 aa31.67■■■□□ 2.66
GPCPD1-206ENST00000481690 BLMP54132 1417 aaPredicted RBP31.66■■■□□ 2.66
GPCPD1-206ENST00000481690 NLRP13Q86W25 1043 aa31.66■■■□□ 2.66
GPCPD1-206ENST00000481690 USP19O94966 1318 aa31.66■■■□□ 2.66
GPCPD1-206ENST00000481690 BRD4O60885 1362 aaPredicted RBP31.66■■■□□ 2.66
GPCPD1-206ENST00000481690 AKAP12Q02952 1782 aa31.65■■■□□ 2.66
GPCPD1-206ENST00000481690 CARD11Q9BXL7 1154 aa31.64■■■□□ 2.66
GPCPD1-206ENST00000481690 THSD7AQ9UPZ6 1657 aa31.62■■■□□ 2.65
GPCPD1-206ENST00000481690 PIK3C2AO00443 1686 aa31.61■■■□□ 2.65
GPCPD1-206ENST00000481690 LMO7Q8WWI1 1683 aa31.6■■■□□ 2.65
GPCPD1-206ENST00000481690 SF3B2Q13435 895 aaKnown RBP31.6■■■□□ 2.65
GPCPD1-206ENST00000481690 CPDO75976 1380 aa31.59■■■□□ 2.65
GPCPD1-206ENST00000481690 GCP02774 474 aa31.59■■■□□ 2.65
GPCPD1-206ENST00000481690 EVA1CP58658 441 aa31.59■■■□□ 2.65
GPCPD1-206ENST00000481690 CAMTA1Q9Y6Y1 1673 aa31.58■■■□□ 2.65
GPCPD1-206ENST00000481690 SPATA31A1Q5TZJ5 1347 aa31.58■■■□□ 2.65
GPCPD1-206ENST00000481690 NLRP6P59044 892 aa31.58■■■□□ 2.65
GPCPD1-206ENST00000481690 SSH2Q76I76 1423 aa31.58■■■□□ 2.65
GPCPD1-206ENST00000481690 ZBTB7CA1YPR0 619 aa31.56■■■□□ 2.64
GPCPD1-206ENST00000481690 USP35Q9P2H5 1018 aa31.56■■■□□ 2.64
GPCPD1-206ENST00000481690 SLIT3O75094 1523 aa31.55■■■□□ 2.64
GPCPD1-206ENST00000481690 SBNO2Q9Y2G9 1366 aa31.55■■■□□ 2.64
GPCPD1-206ENST00000481690 DEFB132Q7Z7B7 95 aa31.54■■■□□ 2.64
GPCPD1-206ENST00000481690 ZRANB1Q9UGI0 708 aa31.53■■■□□ 2.64
GPCPD1-206ENST00000481690 FAM182BQ5T319 152 aa31.52■■■□□ 2.64
GPCPD1-206ENST00000481690 ZNF692Q9BU19 519 aaPredicted RBP31.52■■■□□ 2.64
GPCPD1-206ENST00000481690 MON2Q7Z3U7 1717 aa31.52■■■□□ 2.64
GPCPD1-206ENST00000481690 RGPD1P0DJD0 1748 aa31.51■■■□□ 2.63
GPCPD1-206ENST00000481690 LARP1Q6PKG0 1096 aaKnown RBP31.5■■■□□ 2.63
GPCPD1-206ENST00000481690 TTC21BQ7Z4L5 1316 aa31.49■■■□□ 2.63
GPCPD1-206ENST00000481690 KTN1Q86UP2 1357 aaKnown RBP31.49■■■□□ 2.63
GPCPD1-206ENST00000481690 COL5A2P05997 1499 aaPredicted RBP31.48■■■□□ 2.63
GPCPD1-206ENST00000481690 CPSF1Q10570 1443 aaKnown RBP31.48■■■□□ 2.63
GPCPD1-206ENST00000481690 TTC21AQ8NDW8 1320 aa31.46■■■□□ 2.63
GPCPD1-206ENST00000481690 COL18A1P39060 1754 aa31.43■■■□□ 2.62
GPCPD1-206ENST00000481690 SOX12O15370 315 aa31.43■■■□□ 2.62
GPCPD1-206ENST00000481690 BAG6P46379 1132 aa31.43■■■□□ 2.62
GPCPD1-206ENST00000481690 BARGINQ6ZT62 677 aa31.43■■■□□ 2.62
GPCPD1-206ENST00000481690 TCP11L2Q8N4U5 519 aa31.43■■■□□ 2.62
GPCPD1-206ENST00000481690 TMC1Q8TDI8 760 aa31.43■■■□□ 2.62
GPCPD1-206ENST00000481690 AATKQ6ZMQ8 1374 aa31.43■■■□□ 2.62
GPCPD1-206ENST00000481690 TNS1Q9HBL0 1735 aaKnown RBP31.42■■■□□ 2.62
GPCPD1-206ENST00000481690 RGPD5Q99666 1765 aa31.42■■■□□ 2.62
GPCPD1-206ENST00000481690 CRB1P82279 1406 aa31.4■■■□□ 2.62
GPCPD1-206ENST00000481690 KCNH5Q8NCM2 988 aa31.39■■■□□ 2.62
GPCPD1-206ENST00000481690 CD163L1Q9NR16 1453 aa31.39■■■□□ 2.62
GPCPD1-206ENST00000481690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.38■■■□□ 2.61
GPCPD1-206ENST00000481690 PARP4Q9UKK3 1724 aaKnown RBP31.38■■■□□ 2.61
GPCPD1-206ENST00000481690 PDE3BQ13370 1112 aa31.37■■■□□ 2.61
GPCPD1-206ENST00000481690 THRAP3Q9Y2W1 955 aaKnown RBP31.37■■■□□ 2.61
GPCPD1-206ENST00000481690 HDGFL2Q7Z4V5 671 aaPredicted RBP31.36■■■□□ 2.61
GPCPD1-206ENST00000481690 NFAT5O94916 1531 aa31.35■■■□□ 2.61
GPCPD1-206ENST00000481690 FAM196AQ6ZSG2 479 aa31.35■■■□□ 2.61
GPCPD1-206ENST00000481690 SLC12A5Q9H2X9 1139 aa31.35■■■□□ 2.61
GPCPD1-206ENST00000481690 WNK3Q9BYP7 1800 aa31.35■■■□□ 2.61
GPCPD1-206ENST00000481690 ST20-MTHFSA0A0A6YYL1 179 aa31.34■■■□□ 2.61
GPCPD1-206ENST00000481690 TOM1L2Q6ZVM7 507 aa31.34■■■□□ 2.61
GPCPD1-206ENST00000481690 USP54Q70EL1 1684 aa31.34■■■□□ 2.61
GPCPD1-206ENST00000481690 ARHGEF25Q86VW2 580 aa31.33■■■□□ 2.61
GPCPD1-206ENST00000481690 EN1Q05925 392 aaPredicted RBP31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms