RNA–Protein interactions for RNA: ENST00000481368.5

SNHG12-209, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-209ENST00000481368 TRPC5Q9UL62 973 aaPredicted RBP20.68■□□□□ 0.9
SNHG12-209ENST00000481368 ACEP12821 1306 aa20.68■□□□□ 0.9
SNHG12-209ENST00000481368 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
SNHG12-209ENST00000481368 PPIP5K1Q6PFW1 1433 aa20.66■□□□□ 0.9
SNHG12-209ENST00000481368 RALGAPBQ86X10 1494 aa20.66■□□□□ 0.9
SNHG12-209ENST00000481368 PAK3O75914 559 aaPredicted RBP20.65■□□□□ 0.9
SNHG12-209ENST00000481368 FAM83GA6ND36 823 aa20.64■□□□□ 0.9
SNHG12-209ENST00000481368 GLI3P10071 1580 aa20.64■□□□□ 0.9
SNHG12-209ENST00000481368 NWD2Q9ULI1 1742 aa20.64■□□□□ 0.89
SNHG12-209ENST00000481368 HAP1P54257 671 aaPredicted RBP20.63■□□□□ 0.89
SNHG12-209ENST00000481368 UNC5CLQ8IV45 518 aa20.63■□□□□ 0.89
SNHG12-209ENST00000481368 PHRF1Q9P1Y6 1649 aaKnown RBP20.62■□□□□ 0.89
SNHG12-209ENST00000481368 NRAPQ86VF7 1730 aa20.62■□□□□ 0.89
SNHG12-209ENST00000481368 UPF1Q92900 1129 aaKnown RBP eCLIP20.61■□□□□ 0.89
SNHG12-209ENST00000481368 GJD4Q96KN9 370 aaPredicted RBP20.61■□□□□ 0.89
SNHG12-209ENST00000481368 CABP1Q9NZU7 370 aa20.61■□□□□ 0.89
SNHG12-209ENST00000481368 NUTM2GQ5VZR2 741 aa20.6■□□□□ 0.89
SNHG12-209ENST00000481368 CARD11Q9BXL7 1154 aa20.6■□□□□ 0.89
SNHG12-209ENST00000481368 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
SNHG12-209ENST00000481368 COL14A1Q05707 1796 aaKnown RBP20.58■□□□□ 0.88
SNHG12-209ENST00000481368 PCGF6Q9BYE7 350 aa20.57■□□□□ 0.88
SNHG12-209ENST00000481368 SBNO2Q9Y2G9 1366 aa20.57■□□□□ 0.88
SNHG12-209ENST00000481368 USP6P35125 1406 aa20.56■□□□□ 0.88
SNHG12-209ENST00000481368 NRKQ7Z2Y5 1582 aa20.56■□□□□ 0.88
SNHG12-209ENST00000481368 SSH2Q76I76 1423 aa20.56■□□□□ 0.88
SNHG12-209ENST00000481368 AKAP12Q02952 1782 aa20.55■□□□□ 0.88
SNHG12-209ENST00000481368 BRWD3Q6RI45 1802 aa20.55■□□□□ 0.88
SNHG12-209ENST00000481368 VPS72Q15906 364 aa20.55■□□□□ 0.88
SNHG12-209ENST00000481368 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
SNHG12-209ENST00000481368 KIAA0232Q92628 1395 aa20.54■□□□□ 0.88
SNHG12-209ENST00000481368 ABTB2Q8N961 1025 aa20.54■□□□□ 0.88
SNHG12-209ENST00000481368 USP19O94966 1318 aa20.53■□□□□ 0.88
SNHG12-209ENST00000481368 PIK3C2AO00443 1686 aa20.53■□□□□ 0.88
SNHG12-209ENST00000481368 CHRNA2Q15822 529 aa20.51■□□□□ 0.87
SNHG12-209ENST00000481368 ZC3H6P61129 1189 aaKnown RBP20.51■□□□□ 0.87
SNHG12-209ENST00000481368 PRDM11Q9NQV5 511 aa20.51■□□□□ 0.87
SNHG12-209ENST00000481368 CPSF1Q10570 1443 aaKnown RBP20.5■□□□□ 0.87
SNHG12-209ENST00000481368 ATAD2Q6PL18 1390 aa20.49■□□□□ 0.87
SNHG12-209ENST00000481368 TESK2Q96S53 571 aa20.49■□□□□ 0.87
SNHG12-209ENST00000481368 CD163L1Q9NR16 1453 aa20.49■□□□□ 0.87
SNHG12-209ENST00000481368 BRD4O60885 1362 aaPredicted RBP20.49■□□□□ 0.87
SNHG12-209ENST00000481368 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
SNHG12-209ENST00000481368 ONECUT3O60422 494 aaPredicted RBP20.48■□□□□ 0.87
SNHG12-209ENST00000481368 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
SNHG12-209ENST00000481368 ST20-MTHFSA0A0A6YYL1 179 aa20.46■□□□□ 0.87
SNHG12-209ENST00000481368 CCDC9Q9Y3X0 531 aaKnown RBP20.46■□□□□ 0.87
SNHG12-209ENST00000481368 CAMTA1Q9Y6Y1 1673 aa20.46■□□□□ 0.87
SNHG12-209ENST00000481368 SLIT3O75094 1523 aa20.46■□□□□ 0.87
SNHG12-209ENST00000481368 GCP02774 474 aa20.46■□□□□ 0.87
SNHG12-209ENST00000481368 NLRP13Q86W25 1043 aa20.46■□□□□ 0.87
SNHG12-209ENST00000481368 SEPT12Q8IYM1 358 aa20.46■□□□□ 0.87
SNHG12-209ENST00000481368 CPDO75976 1380 aa20.46■□□□□ 0.87
SNHG12-209ENST00000481368 TTC21BQ7Z4L5 1316 aa20.45■□□□□ 0.86
SNHG12-209ENST00000481368 SPATA31A5Q5VU36 1347 aa20.44■□□□□ 0.86
SNHG12-209ENST00000481368 SPATA31A7Q8IWB4 1347 aa20.44■□□□□ 0.86
SNHG12-209ENST00000481368 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
SNHG12-209ENST00000481368 NLRP6P59044 892 aa20.43■□□□□ 0.86
SNHG12-209ENST00000481368 FAM98CQ17RN3 349 aaKnown RBP20.43■□□□□ 0.86
SNHG12-209ENST00000481368 ZNF692Q9BU19 519 aaPredicted RBP20.42■□□□□ 0.86
SNHG12-209ENST00000481368 SLC12A5Q9H2X9 1139 aa20.42■□□□□ 0.86
SNHG12-209ENST00000481368 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
SNHG12-209ENST00000481368 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
SNHG12-209ENST00000481368 COL18A1P39060 1754 aa20.41■□□□□ 0.86
SNHG12-209ENST00000481368 STRN4Q9NRL3 753 aa20.41■□□□□ 0.86
SNHG12-209ENST00000481368 USP47Q96K76 1375 aa20.4■□□□□ 0.86
SNHG12-209ENST00000481368 SPATA31A1Q5TZJ5 1347 aa20.39■□□□□ 0.86
SNHG12-209ENST00000481368 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.85
SNHG12-209ENST00000481368 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
SNHG12-209ENST00000481368 TTC21AQ8NDW8 1320 aa20.38■□□□□ 0.85
SNHG12-209ENST00000481368 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
SNHG12-209ENST00000481368 A0A1W2PP64 1363 aa20.37■□□□□ 0.85
SNHG12-209ENST00000481368 USP54Q70EL1 1684 aa20.37■□□□□ 0.85
SNHG12-209ENST00000481368 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
SNHG12-209ENST00000481368 LARP1Q6PKG0 1096 aaKnown RBP20.37■□□□□ 0.85
SNHG12-209ENST00000481368 PUS7Q96PZ0 661 aaKnown RBP20.37■□□□□ 0.85
SNHG12-209ENST00000481368 NFAT5O94916 1531 aa20.37■□□□□ 0.85
SNHG12-209ENST00000481368 RGPD5Q99666 1765 aa20.36■□□□□ 0.85
SNHG12-209ENST00000481368 KRT27Q7Z3Y8 459 aa20.36■□□□□ 0.85
SNHG12-209ENST00000481368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNHG12-209ENST00000481368 SRCAPQ6ZRS2 3230 aa20.36■□□□□ 0.85
SNHG12-209ENST00000481368 NME9Q86XW9 330 aa20.34■□□□□ 0.85
SNHG12-209ENST00000481368 USP35Q9P2H5 1018 aa20.34■□□□□ 0.85
SNHG12-209ENST00000481368 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
SNHG12-209ENST00000481368 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
SNHG12-209ENST00000481368 A0A0G2JS52 829 aa20.34■□□□□ 0.85
SNHG12-209ENST00000481368 MYT1Q01538 1121 aa20.34■□□□□ 0.85
SNHG12-209ENST00000481368 USP31Q70CQ4 1352 aa20.33■□□□□ 0.84
SNHG12-209ENST00000481368 ZBTB7CA1YPR0 619 aa20.33■□□□□ 0.84
SNHG12-209ENST00000481368 SOX12O15370 315 aa20.33■□□□□ 0.84
SNHG12-209ENST00000481368 FAM182BQ5T319 152 aa20.33■□□□□ 0.84
SNHG12-209ENST00000481368 ARHGEF25Q86VW2 580 aa20.33■□□□□ 0.84
SNHG12-209ENST00000481368 EVA1CP58658 441 aa20.32■□□□□ 0.84
SNHG12-209ENST00000481368 CCER1Q8TC90 406 aaPredicted RBP20.32■□□□□ 0.84
SNHG12-209ENST00000481368 EDC4Q6P2E9 1401 aaKnown RBP20.32■□□□□ 0.84
SNHG12-209ENST00000481368 BLMP54132 1417 aaPredicted RBP20.31■□□□□ 0.84
SNHG12-209ENST00000481368 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
SNHG12-209ENST00000481368 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
SNHG12-209ENST00000481368 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
SNHG12-209ENST00000481368 KCNH5Q8NCM2 988 aa20.29■□□□□ 0.84
SNHG12-209ENST00000481368 TERF2IPQ9NYB0 399 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms