RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 RNF223E7ERA6 249 aa8.77□□□□□ -1.01
COPA-203ENST00000481040 E9PSI1 815 aa8.77□□□□□ -1.01
COPA-203ENST00000481040 GFRA3O60609 400 aa8.77□□□□□ -1.01
COPA-203ENST00000481040 RDH13Q8NBN7 331 aa8.77□□□□□ -1.01
COPA-203ENST00000481040 TRIM34Q9BYJ4 488 aa8.77□□□□□ -1.01
COPA-203ENST00000481040 V9GY48 417 aaPredicted RBP8.77□□□□□ -1.01
COPA-203ENST00000481040 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
COPA-203ENST00000481040 LMOD1P29536 600 aaPredicted RBP8.76□□□□□ -1.01
COPA-203ENST00000481040 USP46P62068 366 aa8.76□□□□□ -1.01
COPA-203ENST00000481040 CTDSPL2Q05D32 466 aa8.76□□□□□ -1.01
COPA-203ENST00000481040 PUS10Q3MIT2 529 aaKnown RBP8.76□□□□□ -1.01
COPA-203ENST00000481040 KMT5BQ4FZB7 885 aa8.76□□□□□ -1.01
COPA-203ENST00000481040 ALG2Q9H553 416 aa8.76□□□□□ -1.01
COPA-203ENST00000481040 IVNS1ABPQ9Y6Y0 642 aa8.76□□□□□ -1.01
COPA-203ENST00000481040 S1PR4O95977 384 aa8.75□□□□□ -1.01
COPA-203ENST00000481040 FDX1P10109 184 aa8.75□□□□□ -1.01
COPA-203ENST00000481040 CCDC27Q2M243 656 aa8.75□□□□□ -1.01
COPA-203ENST00000481040 HOXA2O43364 376 aa8.74□□□□□ -1.01
COPA-203ENST00000481040 VRTNQ9H8Y1 702 aa8.74□□□□□ -1.01
COPA-203ENST00000481040 TRIM67Q6ZTA4 783 aa8.73□□□□□ -1.01
COPA-203ENST00000481040 SND1Q7KZF4 910 aaKnown RBP eCLIP8.73□□□□□ -1.01
COPA-203ENST00000481040 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
COPA-203ENST00000481040 PCDHGC3Q9UN70 934 aa8.73□□□□□ -1.01
COPA-203ENST00000481040 AMOTL2Q9Y2J4 779 aa8.73□□□□□ -1.01
COPA-203ENST00000481040 ATG7O95352 703 aa8.72□□□□□ -1.01
COPA-203ENST00000481040 GCGRP47871 477 aa8.72□□□□□ -1.01
COPA-203ENST00000481040 HELBQ8NG08 1087 aaPredicted RBP8.72□□□□□ -1.01
COPA-203ENST00000481040 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
COPA-203ENST00000481040 LOC105371045A0A1W2PR82 267 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 TMEM88BA6NKF7 163 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 IGSF3O75054 1194 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 GGCXP38435 758 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 CDCA8Q53HL2 280 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 PLA2G2CQ5R387 149 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 PRR7Q8TB68 274 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.02
COPA-203ENST00000481040 NRG2O14511 850 aaPredicted RBP8.7□□□□□ -1.02
COPA-203ENST00000481040 ADH1BP00325 375 aa8.7□□□□□ -1.02
COPA-203ENST00000481040 SOX11P35716 441 aa8.7□□□□□ -1.02
COPA-203ENST00000481040 GUCA2AQ02747 115 aa8.7□□□□□ -1.02
COPA-203ENST00000481040 MTMR2Q13614 643 aa8.7□□□□□ -1.02
COPA-203ENST00000481040 RSPH4AQ5TD94 716 aa8.7□□□□□ -1.02
COPA-203ENST00000481040 LIAT1Q6ZQX7 453 aa8.7□□□□□ -1.02
COPA-203ENST00000481040 TSC1Q92574 1164 aa8.7□□□□□ -1.02
COPA-203ENST00000481040 LAPTM4AQ15012 233 aa8.69□□□□□ -1.02
COPA-203ENST00000481040 SLC19A1P41440 591 aa8.68□□□□□ -1.02
COPA-203ENST00000481040 FUT2Q10981 343 aa8.68□□□□□ -1.02
COPA-203ENST00000481040 MORN1Q5T089 497 aa8.68□□□□□ -1.02
COPA-203ENST00000481040 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
COPA-203ENST00000481040 HLA-CQ95604 372 aa8.68□□□□□ -1.02
COPA-203ENST00000481040 MAFBQ9Y5Q3 323 aaPredicted RBP8.68□□□□□ -1.02
COPA-203ENST00000481040 NR1I2O75469 434 aa8.67□□□□□ -1.02
COPA-203ENST00000481040 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
COPA-203ENST00000481040 TRAF7Q6Q0C0 670 aa8.67□□□□□ -1.02
COPA-203ENST00000481040 ANKLE1Q8NAG6 615 aa8.67□□□□□ -1.02
COPA-203ENST00000481040 THAP11Q96EK4 314 aa8.67□□□□□ -1.02
COPA-203ENST00000481040 PDZRN3Q9UPQ7 1066 aa8.67□□□□□ -1.02
COPA-203ENST00000481040 CFAP99D6REC4 459 aa8.66□□□□□ -1.02
COPA-203ENST00000481040 SPRYD7Q5W111 196 aa8.66□□□□□ -1.02
COPA-203ENST00000481040 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
COPA-203ENST00000481040 TBC1D9Q6ZT07 1266 aa8.65□□□□□ -1.02
COPA-203ENST00000481040 GNEQ9Y223 722 aaKnown RBP8.65□□□□□ -1.02
COPA-203ENST00000481040 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
COPA-203ENST00000481040 SPSB2Q99619 263 aa8.64□□□□□ -1.03
COPA-203ENST00000481040 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
COPA-203ENST00000481040 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
COPA-203ENST00000481040 C6orf229H3BNL8 230 aa8.63□□□□□ -1.03
COPA-203ENST00000481040 ATP9BO43861 1147 aa8.63□□□□□ -1.03
COPA-203ENST00000481040 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
COPA-203ENST00000481040 PRDM9Q9NQV7 894 aa8.63□□□□□ -1.03
COPA-203ENST00000481040 NR6A1Q15406 480 aa8.62□□□□□ -1.03
COPA-203ENST00000481040 PNMA1Q8ND90 353 aa8.62□□□□□ -1.03
COPA-203ENST00000481040 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
COPA-203ENST00000481040 EIF4G2P78344 907 aaKnown RBP eCLIP8.61□□□□□ -1.03
COPA-203ENST00000481040 RNF19BQ6ZMZ0 732 aa8.61□□□□□ -1.03
COPA-203ENST00000481040 ZNF598Q86UK7 904 aaKnown RBP8.61□□□□□ -1.03
COPA-203ENST00000481040 GDF9O60383 454 aa8.6□□□□□ -1.03
COPA-203ENST00000481040 ELOAQ14241 798 aaKnown RBP8.6□□□□□ -1.03
COPA-203ENST00000481040 GRIPAP1Q4V328 841 aa8.6□□□□□ -1.03
COPA-203ENST00000481040 KANK4Q5T7N3 995 aaPredicted RBP8.6□□□□□ -1.03
COPA-203ENST00000481040 ZNF697Q5TEC3 545 aa8.6□□□□□ -1.03
COPA-203ENST00000481040 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
COPA-203ENST00000481040 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
COPA-203ENST00000481040 CCER1Q8TC90 406 aaPredicted RBP8.58□□□□□ -1.04
COPA-203ENST00000481040 ZMIZ1Q9ULJ6 1067 aa8.58□□□□□ -1.04
COPA-203ENST00000481040 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
COPA-203ENST00000481040 PRR20EP86478 221 aa8.57□□□□□ -1.04
COPA-203ENST00000481040 PRR20CP86479 221 aa8.57□□□□□ -1.04
COPA-203ENST00000481040 PRR20DP86480 221 aa8.57□□□□□ -1.04
COPA-203ENST00000481040 PRR20BP86481 221 aa8.57□□□□□ -1.04
COPA-203ENST00000481040 PRR20AP86496 221 aa8.57□□□□□ -1.04
COPA-203ENST00000481040 TMEM164Q5U3C3 297 aa8.57□□□□□ -1.04
COPA-203ENST00000481040 TXNDC2Q86VQ3 553 aa8.57□□□□□ -1.04
COPA-203ENST00000481040 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
COPA-203ENST00000481040 FCF1Q9Y324 198 aaKnown RBP8.57□□□□□ -1.04
COPA-203ENST00000481040 UNCXA6NJT0 531 aa8.56□□□□□ -1.04
COPA-203ENST00000481040 NR1H3Q13133 447 aa8.56□□□□□ -1.04
COPA-203ENST00000481040 PKD2L1Q9P0L9 805 aa8.56□□□□□ -1.04
COPA-203ENST00000481040 RBM47A0AV96 593 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms