RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ZNF692Q9BU19 519 aaPredicted RBP28.38■■■□□ 2.13
CTSA-206ENST00000480961 USP6P35125 1406 aa28.37■■■□□ 2.13
CTSA-206ENST00000480961 C11orf95C9JLR9 678 aaPredicted RBP28.37■■■□□ 2.13
CTSA-206ENST00000480961 ABTB2Q8N961 1025 aa28.37■■■□□ 2.13
CTSA-206ENST00000480961 KTN1Q86UP2 1357 aaKnown RBP28.37■■■□□ 2.13
CTSA-206ENST00000480961 TRPM3Q9HCF6 1732 aaPredicted RBP28.36■■■□□ 2.13
CTSA-206ENST00000480961 HAP1P54257 671 aaPredicted RBP28.36■■■□□ 2.13
CTSA-206ENST00000480961 HDGFL2Q7Z4V5 671 aaPredicted RBP28.36■■■□□ 2.13
CTSA-206ENST00000480961 CPSF1Q10570 1443 aaKnown RBP28.35■■■□□ 2.13
CTSA-206ENST00000480961 TERF2IPQ9NYB0 399 aa28.35■■■□□ 2.13
CTSA-206ENST00000480961 CD163L1Q9NR16 1453 aa28.34■■■□□ 2.13
CTSA-206ENST00000480961 C8orf37Q96NL8 207 aa28.34■■■□□ 2.13
CTSA-206ENST00000480961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.33■■■□□ 2.13
CTSA-206ENST00000480961 TTC21BQ7Z4L5 1316 aa28.33■■■□□ 2.13
CTSA-206ENST00000480961 RGS17Q9UGC6 210 aaPredicted RBP28.31■■■□□ 2.12
CTSA-206ENST00000480961 A0A1W2PP64 1363 aa28.31■■■□□ 2.12
CTSA-206ENST00000480961 SSH2Q76I76 1423 aa28.31■■■□□ 2.12
CTSA-206ENST00000480961 COL22A1Q8NFW1 1626 aaPredicted RBP28.31■■■□□ 2.12
CTSA-206ENST00000480961 NGLY1Q96IV0 654 aa28.29■■■□□ 2.12
CTSA-206ENST00000480961 BRD4O60885 1362 aaPredicted RBP28.28■■■□□ 2.12
CTSA-206ENST00000480961 NINLQ9Y2I6 1382 aa28.28■■■□□ 2.12
CTSA-206ENST00000480961 NLRP6P59044 892 aa28.28■■■□□ 2.12
CTSA-206ENST00000480961 ZRANB1Q9UGI0 708 aa28.28■■■□□ 2.12
CTSA-206ENST00000480961 ALS2Q96Q42 1657 aa28.28■■■□□ 2.12
CTSA-206ENST00000480961 AFF2P51816 1311 aa28.25■■■□□ 2.11
CTSA-206ENST00000480961 NLRP13Q86W25 1043 aa28.25■■■□□ 2.11
CTSA-206ENST00000480961 NME9Q86XW9 330 aa28.25■■■□□ 2.11
CTSA-206ENST00000480961 ANKRD36BQ8N2N9 1353 aa28.24■■■□□ 2.11
CTSA-206ENST00000480961 TTC21AQ8NDW8 1320 aa28.23■■■□□ 2.11
CTSA-206ENST00000480961 KIF7Q2M1P5 1343 aa28.21■■■□□ 2.11
CTSA-206ENST00000480961 ZC3H6P61129 1189 aaKnown RBP28.21■■■□□ 2.11
CTSA-206ENST00000480961 AKAP12Q02952 1782 aa28.21■■■□□ 2.11
CTSA-206ENST00000480961 EDC4Q6P2E9 1401 aaKnown RBP28.2■■■□□ 2.11
CTSA-206ENST00000480961 FAM83GA6ND36 823 aa28.2■■■□□ 2.1
CTSA-206ENST00000480961 SOX12O15370 315 aa28.2■■■□□ 2.1
CTSA-206ENST00000480961 ZEB1P37275 1124 aaPredicted RBP28.2■■■□□ 2.1
CTSA-206ENST00000480961 POTEAQ6S8J7 498 aa28.2■■■□□ 2.1
CTSA-206ENST00000480961 CARD14Q9BXL6 1004 aa28.2■■■□□ 2.1
CTSA-206ENST00000480961 USP19O94966 1318 aa28.19■■■□□ 2.1
CTSA-206ENST00000480961 GCP02774 474 aa28.18■■■□□ 2.1
CTSA-206ENST00000480961 CHRNA2Q15822 529 aa28.16■■■□□ 2.1
CTSA-206ENST00000480961 FNBP4Q8N3X1 1017 aaPredicted RBP28.16■■■□□ 2.1
CTSA-206ENST00000480961 USP21Q9UK80 565 aa28.16■■■□□ 2.1
CTSA-206ENST00000480961 MON2Q7Z3U7 1717 aa28.15■■■□□ 2.1
CTSA-206ENST00000480961 ZBTB7CA1YPR0 619 aa28.15■■■□□ 2.1
CTSA-206ENST00000480961 ZNF772Q68DY9 489 aaPredicted RBP28.15■■■□□ 2.1
CTSA-206ENST00000480961 PANK3Q9H999 370 aa28.15■■■□□ 2.1
CTSA-206ENST00000480961 PRDM11Q9NQV5 511 aa28.15■■■□□ 2.1
CTSA-206ENST00000480961 PIK3C2AO00443 1686 aa28.15■■■□□ 2.1
CTSA-206ENST00000480961 NRKQ7Z2Y5 1582 aa28.15■■■□□ 2.1
CTSA-206ENST00000480961 KIAA0232Q92628 1395 aa28.14■■■□□ 2.1
CTSA-206ENST00000480961 WASHC2AQ641Q2 1341 aa28.13■■■□□ 2.09
CTSA-206ENST00000480961 MYOM1P52179 1685 aa28.12■■■□□ 2.09
CTSA-206ENST00000480961 ABCA3Q99758 1704 aa28.12■■■□□ 2.09
CTSA-206ENST00000480961 NSD3Q9BZ95 1437 aa28.11■■■□□ 2.09
CTSA-206ENST00000480961 ILDR2Q71H61 639 aa28.11■■■□□ 2.09
CTSA-206ENST00000480961 GGNBP2Q9H3C7 697 aa28.11■■■□□ 2.09
CTSA-206ENST00000480961 QTRT2Q9H974 415 aaKnown RBP28.11■■■□□ 2.09
CTSA-206ENST00000480961 USP31Q70CQ4 1352 aa28.11■■■□□ 2.09
CTSA-206ENST00000480961 CCDC7Q96M83 1385 aa28.11■■■□□ 2.09
CTSA-206ENST00000480961 FYB1O15117 783 aa28.1■■■□□ 2.09
CTSA-206ENST00000480961 BTG4Q9NY30 223 aa28.09■■■□□ 2.09
CTSA-206ENST00000480961 CRYBG1Q9Y4K1 1723 aa28.09■■■□□ 2.09
CTSA-206ENST00000480961 BCL9LQ86UU0 1499 aa28.08■■■□□ 2.09
CTSA-206ENST00000480961 PHRF1Q9P1Y6 1649 aaKnown RBP28.07■■■□□ 2.08
CTSA-206ENST00000480961 UNC5CLQ8IV45 518 aa28.07■■■□□ 2.08
CTSA-206ENST00000480961 COG3Q96JB2 828 aa28.07■■■□□ 2.08
CTSA-206ENST00000480961 KCNH5Q8NCM2 988 aa28.06■■■□□ 2.08
CTSA-206ENST00000480961 SLIT3O75094 1523 aa28.06■■■□□ 2.08
CTSA-206ENST00000480961 SLIT2O94813 1529 aa28.06■■■□□ 2.08
CTSA-206ENST00000480961 CPDO75976 1380 aa28.04■■■□□ 2.08
CTSA-206ENST00000480961 FBLN1P23142 703 aa28.04■■■□□ 2.08
CTSA-206ENST00000480961 OVOS2A0A0J9YW53 1432 aa28.03■■■□□ 2.08
CTSA-206ENST00000480961 OVOS2Q6IE36 1432 aa28.03■■■□□ 2.08
CTSA-206ENST00000480961 TRPC5Q9UL62 973 aaPredicted RBP28.03■■■□□ 2.08
CTSA-206ENST00000480961 MARF1Q9Y4F3 1742 aaKnown RBP28.02■■■□□ 2.08
CTSA-206ENST00000480961 ARHGEF25Q86VW2 580 aa28.02■■■□□ 2.08
CTSA-206ENST00000480961 RXRBP28702 533 aa28.01■■■□□ 2.07
CTSA-206ENST00000480961 STRN4Q9NRL3 753 aa28.01■■■□□ 2.07
CTSA-206ENST00000480961 CCDC9Q9Y3X0 531 aaKnown RBP28■■■□□ 2.07
CTSA-206ENST00000480961 CGNL1Q0VF96 1302 aa27.99■■■□□ 2.07
CTSA-206ENST00000480961 ATRNO75882 1429 aa27.99■■■□□ 2.07
CTSA-206ENST00000480961 AXIN2Q9Y2T1 843 aa27.98■■■□□ 2.07
CTSA-206ENST00000480961 EVA1CP58658 441 aa27.97■■■□□ 2.07
CTSA-206ENST00000480961 NFAT5O94916 1531 aa27.97■■■□□ 2.07
CTSA-206ENST00000480961 COL14A1Q05707 1796 aaKnown RBP27.96■■■□□ 2.07
CTSA-206ENST00000480961 RBM6P78332 1123 aaKnown RBP27.96■■■□□ 2.07
CTSA-206ENST00000480961 VPS72Q15906 364 aa27.96■■■□□ 2.07
CTSA-206ENST00000480961 KNSTRNQ9Y448 316 aa27.96■■■□□ 2.07
CTSA-206ENST00000480961 GJD4Q96KN9 370 aaPredicted RBP27.95■■■□□ 2.06
CTSA-206ENST00000480961 AATKQ6ZMQ8 1374 aa27.95■■■□□ 2.06
CTSA-206ENST00000480961 PLCH1Q4KWH8 1693 aa27.94■■■□□ 2.06
CTSA-206ENST00000480961 CAMTA1Q9Y6Y1 1673 aa27.94■■■□□ 2.06
CTSA-206ENST00000480961 RRS1Q15050 365 aaKnown RBP27.92■■■□□ 2.06
CTSA-206ENST00000480961 LARP1Q6PKG0 1096 aaKnown RBP27.92■■■□□ 2.06
CTSA-206ENST00000480961 TNNT2P45379 298 aaPredicted RBP27.91■■■□□ 2.06
CTSA-206ENST00000480961 CNGB1Q14028 1251 aaPredicted RBP27.91■■■□□ 2.06
CTSA-206ENST00000480961 PER1O15534 1290 aaPredicted RBP27.9■■■□□ 2.06
CTSA-206ENST00000480961 USP54Q70EL1 1684 aa27.9■■■□□ 2.06
CTSA-206ENST00000480961 MAP3K19Q56UN5 1328 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms