RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 KIAA1210Q9ULL0 1709 aa27.31■■□□□ 1.96
ABCF3-214ENST00000480562 ONECUT3O60422 494 aaPredicted RBP27.3■■□□□ 1.96
ABCF3-214ENST00000480562 NRAPQ86VF7 1730 aa27.29■■□□□ 1.96
ABCF3-214ENST00000480562 COL14A1Q05707 1796 aaKnown RBP27.27■■□□□ 1.96
ABCF3-214ENST00000480562 CRYBG1Q9Y4K1 1723 aa27.27■■□□□ 1.96
ABCF3-214ENST00000480562 A0A0G2JS52 829 aa27.26■■□□□ 1.95
ABCF3-214ENST00000480562 MYT1Q01538 1121 aa27.26■■□□□ 1.95
ABCF3-214ENST00000480562 BLMP54132 1417 aaPredicted RBP27.25■■□□□ 1.95
ABCF3-214ENST00000480562 FAM98CQ17RN3 349 aaKnown RBP27.25■■□□□ 1.95
ABCF3-214ENST00000480562 NUTM2GQ5VZR2 741 aa27.25■■□□□ 1.95
ABCF3-214ENST00000480562 KRT27Q7Z3Y8 459 aa27.25■■□□□ 1.95
ABCF3-214ENST00000480562 ZRANB1Q9UGI0 708 aa27.25■■□□□ 1.95
ABCF3-214ENST00000480562 CCDC61Q9Y6R9 512 aa27.25■■□□□ 1.95
ABCF3-214ENST00000480562 ACEP12821 1306 aa27.24■■□□□ 1.95
ABCF3-214ENST00000480562 PRDM11Q9NQV5 511 aa27.24■■□□□ 1.95
ABCF3-214ENST00000480562 NBPF8Q3BBV2 869 aa27.23■■□□□ 1.95
ABCF3-214ENST00000480562 TOPAZ1Q8N9V7 1692 aa27.23■■□□□ 1.95
ABCF3-214ENST00000480562 POLR3AO14802 1390 aaPredicted RBP27.22■■□□□ 1.95
ABCF3-214ENST00000480562 PLEKHG3A1L390 1219 aa27.21■■□□□ 1.95
ABCF3-214ENST00000480562 DEFB132Q7Z7B7 95 aa27.21■■□□□ 1.95
ABCF3-214ENST00000480562 L3MBTL2Q969R5 705 aa27.2■■□□□ 1.94
ABCF3-214ENST00000480562 KIAA0232Q92628 1395 aa27.2■■□□□ 1.94
ABCF3-214ENST00000480562 CENPJQ9HC77 1338 aaPredicted RBP27.19■■□□□ 1.94
ABCF3-214ENST00000480562 SRCAPQ6ZRS2 3230 aa27.19■■□□□ 1.94
ABCF3-214ENST00000480562 SRPK2P78362 688 aaKnown RBP27.19■■□□□ 1.94
ABCF3-214ENST00000480562 CHRNA2Q15822 529 aa27.19■■□□□ 1.94
ABCF3-214ENST00000480562 SIN3AQ96ST3 1273 aa27.19■■□□□ 1.94
ABCF3-214ENST00000480562 SPATA31A5Q5VU36 1347 aa27.18■■□□□ 1.94
ABCF3-214ENST00000480562 SPATA31A7Q8IWB4 1347 aa27.18■■□□□ 1.94
ABCF3-214ENST00000480562 ZC3H6P61129 1189 aaKnown RBP27.18■■□□□ 1.94
ABCF3-214ENST00000480562 SF3B2Q13435 895 aaKnown RBP27.18■■□□□ 1.94
ABCF3-214ENST00000480562 PHRF1Q9P1Y6 1649 aaKnown RBP27.17■■□□□ 1.94
ABCF3-214ENST00000480562 CABP2Q9NPB3 220 aa27.17■■□□□ 1.94
ABCF3-214ENST00000480562 ABTB2Q8N961 1025 aa27.14■■□□□ 1.94
ABCF3-214ENST00000480562 PPIP5K1Q6PFW1 1433 aa27.14■■□□□ 1.93
ABCF3-214ENST00000480562 NEUROD1Q13562 356 aa27.13■■□□□ 1.93
ABCF3-214ENST00000480562 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
ABCF3-214ENST00000480562 QRICH2Q9H0J4 1663 aa27.12■■□□□ 1.93
ABCF3-214ENST00000480562 FAM182BQ5T319 152 aa27.12■■□□□ 1.93
ABCF3-214ENST00000480562 SPATA31A1Q5TZJ5 1347 aa27.1■■□□□ 1.93
ABCF3-214ENST00000480562 NRKQ7Z2Y5 1582 aa27.08■■□□□ 1.93
ABCF3-214ENST00000480562 THSD7AQ9UPZ6 1657 aa27.08■■□□□ 1.92
ABCF3-214ENST00000480562 CABP1Q9NZU7 370 aa27.07■■□□□ 1.92
ABCF3-214ENST00000480562 USP19O94966 1318 aa27.07■■□□□ 1.92
ABCF3-214ENST00000480562 EVA1CP58658 441 aa27.06■■□□□ 1.92
ABCF3-214ENST00000480562 TRPM1Q7Z4N2 1603 aa27.05■■□□□ 1.92
ABCF3-214ENST00000480562 NLRP13Q86W25 1043 aa27.05■■□□□ 1.92
ABCF3-214ENST00000480562 USP35Q9P2H5 1018 aa27.05■■□□□ 1.92
ABCF3-214ENST00000480562 BAG6P46379 1132 aa27.04■■□□□ 1.92
ABCF3-214ENST00000480562 CAMTA1Q9Y6Y1 1673 aa27.03■■□□□ 1.92
ABCF3-214ENST00000480562 SSH2Q76I76 1423 aa27.02■■□□□ 1.92
ABCF3-214ENST00000480562 ROCK2O75116 1388 aaKnown RBP27.02■■□□□ 1.92
ABCF3-214ENST00000480562 CPDO75976 1380 aa27.02■■□□□ 1.92
ABCF3-214ENST00000480562 GCP02774 474 aa27.02■■□□□ 1.92
ABCF3-214ENST00000480562 EVC2Q86UK5 1308 aa27.01■■□□□ 1.91
ABCF3-214ENST00000480562 LARP1Q6PKG0 1096 aaKnown RBP27.01■■□□□ 1.91
ABCF3-214ENST00000480562 USP6P35125 1406 aa27■■□□□ 1.91
ABCF3-214ENST00000480562 BRD4O60885 1362 aaPredicted RBP26.99■■□□□ 1.91
ABCF3-214ENST00000480562 EN1Q05925 392 aaPredicted RBP26.99■■□□□ 1.91
ABCF3-214ENST00000480562 LMO7Q8WWI1 1683 aa26.98■■□□□ 1.91
ABCF3-214ENST00000480562 RGPD1P0DJD0 1748 aa26.97■■□□□ 1.91
ABCF3-214ENST00000480562 ZBTB7CA1YPR0 619 aa26.97■■□□□ 1.91
ABCF3-214ENST00000480562 NLRP6P59044 892 aa26.97■■□□□ 1.91
ABCF3-214ENST00000480562 BARGINQ6ZT62 677 aa26.96■■□□□ 1.91
ABCF3-214ENST00000480562 TCP11L2Q8N4U5 519 aa26.95■■□□□ 1.9
ABCF3-214ENST00000480562 PSDA5PKW4 1024 aaPredicted RBP26.94■■□□□ 1.9
ABCF3-214ENST00000480562 TRIM37O94972 964 aa26.93■■□□□ 1.9
ABCF3-214ENST00000480562 FAM196AQ6ZSG2 479 aa26.93■■□□□ 1.9
ABCF3-214ENST00000480562 PDE3BQ13370 1112 aa26.92■■□□□ 1.9
ABCF3-214ENST00000480562 COL5A2P05997 1499 aaPredicted RBP26.92■■□□□ 1.9
ABCF3-214ENST00000480562 TNS1Q9HBL0 1735 aaKnown RBP26.91■■□□□ 1.9
ABCF3-214ENST00000480562 SLIT3O75094 1523 aa26.9■■□□□ 1.9
ABCF3-214ENST00000480562 PIK3C2AO00443 1686 aa26.9■■□□□ 1.9
ABCF3-214ENST00000480562 DISP2A7MBM2 1401 aa26.89■■□□□ 1.89
ABCF3-214ENST00000480562 TTC21BQ7Z4L5 1316 aa26.89■■□□□ 1.89
ABCF3-214ENST00000480562 EZH2Q15910 746 aaKnown RBP26.88■■□□□ 1.89
ABCF3-214ENST00000480562 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
ABCF3-214ENST00000480562 ZNF692Q9BU19 519 aaPredicted RBP26.87■■□□□ 1.89
ABCF3-214ENST00000480562 THRAP3Q9Y2W1 955 aaKnown RBP26.87■■□□□ 1.89
ABCF3-214ENST00000480562 CRB1P82279 1406 aa26.85■■□□□ 1.89
ABCF3-214ENST00000480562 APBA3O96018 575 aa26.85■■□□□ 1.89
ABCF3-214ENST00000480562 AKAP12Q02952 1782 aa26.84■■□□□ 1.89
ABCF3-214ENST00000480562 SOX12O15370 315 aa26.84■■□□□ 1.89
ABCF3-214ENST00000480562 CAMKK2Q96RR4 588 aa26.84■■□□□ 1.89
ABCF3-214ENST00000480562 CARD11Q9BXL7 1154 aa26.84■■□□□ 1.89
ABCF3-214ENST00000480562 R3HDM1Q15032 1099 aaKnown RBP26.83■■□□□ 1.89
ABCF3-214ENST00000480562 AXIN2Q9Y2T1 843 aa26.83■■□□□ 1.89
ABCF3-214ENST00000480562 CPSF1Q10570 1443 aaKnown RBP26.82■■□□□ 1.88
ABCF3-214ENST00000480562 TOM1L2Q6ZVM7 507 aa26.81■■□□□ 1.88
ABCF3-214ENST00000480562 KTN1Q86UP2 1357 aaKnown RBP26.81■■□□□ 1.88
ABCF3-214ENST00000480562 COL18A1P39060 1754 aa26.81■■□□□ 1.88
ABCF3-214ENST00000480562 TTC21AQ8NDW8 1320 aa26.8■■□□□ 1.88
ABCF3-214ENST00000480562 PARP4Q9UKK3 1724 aaKnown RBP26.79■■□□□ 1.88
ABCF3-214ENST00000480562 ARHGEF25Q86VW2 580 aa26.79■■□□□ 1.88
ABCF3-214ENST00000480562 TONSLQ96HA7 1378 aa26.79■■□□□ 1.88
ABCF3-214ENST00000480562 LRP5O75197 1615 aa26.79■■□□□ 1.88
ABCF3-214ENST00000480562 KCNH5Q8NCM2 988 aa26.78■■□□□ 1.88
ABCF3-214ENST00000480562 SBNO2Q9Y2G9 1366 aa26.78■■□□□ 1.88
ABCF3-214ENST00000480562 WDR17Q8IZU2 1322 aa26.76■■□□□ 1.87
ABCF3-214ENST00000480562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms