RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 ADH1CP00326 375 aa7.56□□□□□ -1.2
NF1-209ENST00000479536 VSIG8P0DPA2 414 aa7.56□□□□□ -1.2
NF1-209ENST00000479536 CLCN1P35523 988 aa7.56□□□□□ -1.2
NF1-209ENST00000479536 KCTD17Q8N5Z5 321 aa7.56□□□□□ -1.2
NF1-209ENST00000479536 ZNF511Q8NB15 262 aa7.56□□□□□ -1.2
NF1-209ENST00000479536 CCDC102AQ96A19 550 aa7.56□□□□□ -1.2
NF1-209ENST00000479536 KCNH2Q12809 1159 aa7.55□□□□□ -1.2
NF1-209ENST00000479536 MPNDQ8N594 471 aa7.55□□□□□ -1.2
NF1-209ENST00000479536 KRI1Q8N9T8 703 aaKnown RBP7.55□□□□□ -1.2
NF1-209ENST00000479536 MAN1A2O60476 641 aa7.54□□□□□ -1.2
NF1-209ENST00000479536 KCNMA1Q12791 1236 aa7.54□□□□□ -1.2
NF1-209ENST00000479536 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
NF1-209ENST00000479536 PRR7Q8TB68 274 aa7.53□□□□□ -1.2
NF1-209ENST00000479536 ARID5BQ14865 1188 aa7.52□□□□□ -1.21
NF1-209ENST00000479536 FAM174AQ8TBP5 190 aa7.52□□□□□ -1.21
NF1-209ENST00000479536 ZIC2O95409 532 aaPredicted RBP7.51□□□□□ -1.21
NF1-209ENST00000479536 NDUFV2P19404 249 aa7.51□□□□□ -1.21
NF1-209ENST00000479536 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.51□□□□□ -1.21
NF1-209ENST00000479536 KLF16Q9BXK1 252 aaPredicted RBP7.51□□□□□ -1.21
NF1-209ENST00000479536 ZFAND3Q9H8U3 227 aa7.51□□□□□ -1.21
NF1-209ENST00000479536 PPFIA3O75145 1194 aa7.5□□□□□ -1.21
NF1-209ENST00000479536 CTHP32929 405 aa7.5□□□□□ -1.21
NF1-209ENST00000479536 GSK3AP49840 483 aa7.5□□□□□ -1.21
NF1-209ENST00000479536 TMEM151AQ8N4L1 468 aa7.5□□□□□ -1.21
NF1-209ENST00000479536 SPIRE2Q8WWL2 714 aa7.5□□□□□ -1.21
NF1-209ENST00000479536 TULP1O00294 542 aaPredicted RBP7.49□□□□□ -1.21
NF1-209ENST00000479536 ITPKCQ96DU7 683 aa7.49□□□□□ -1.21
NF1-209ENST00000479536 MOXD2PA6NHM9 499 aa7.48□□□□□ -1.21
NF1-209ENST00000479536 BMP2P12643 396 aa7.48□□□□□ -1.21
NF1-209ENST00000479536 MTMR2Q13614 643 aa7.48□□□□□ -1.21
NF1-209ENST00000479536 FOXJ1Q92949 421 aa7.48□□□□□ -1.21
NF1-209ENST00000479536 UPP2O95045 317 aa7.47□□□□□ -1.21
NF1-209ENST00000479536 GDF11O95390 407 aa7.47□□□□□ -1.21
NF1-209ENST00000479536 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
NF1-209ENST00000479536 RASSF7Q02833 373 aa7.47□□□□□ -1.21
NF1-209ENST00000479536 CDK15Q96Q40 435 aa7.47□□□□□ -1.21
NF1-209ENST00000479536 SPDYE5A6NIY4 337 aa7.46□□□□□ -1.22
NF1-209ENST00000479536 NR3C2P08235 984 aa7.46□□□□□ -1.22
NF1-209ENST00000479536 DESI1Q6ICB0 168 aa7.46□□□□□ -1.22
NF1-209ENST00000479536 NR5A1Q13285 461 aa7.45□□□□□ -1.22
NF1-209ENST00000479536 LINC00528Q8N1L1 170 aa7.45□□□□□ -1.22
NF1-209ENST00000479536 AGERQ15109 404 aa7.44□□□□□ -1.22
NF1-209ENST00000479536 TMEM132AQ24JP5 1023 aa7.44□□□□□ -1.22
NF1-209ENST00000479536 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
NF1-209ENST00000479536 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
NF1-209ENST00000479536 DNMT3LQ9UJW3 386 aa7.44□□□□□ -1.22
NF1-209ENST00000479536 ADAMTS8Q9UP79 889 aa7.44□□□□□ -1.22
NF1-209ENST00000479536 GTF3C3Q9Y5Q9 886 aa7.44□□□□□ -1.22
NF1-209ENST00000479536 RNF225M0QZC1 329 aaPredicted RBP7.43□□□□□ -1.22
NF1-209ENST00000479536 KRT76Q01546 638 aa7.43□□□□□ -1.22
NF1-209ENST00000479536 LYPD8Q6UX82 237 aa7.43□□□□□ -1.22
NF1-209ENST00000479536 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
NF1-209ENST00000479536 GRM5P41594 1212 aa7.42□□□□□ -1.22
NF1-209ENST00000479536 MEIOBQ8N635 442 aa7.42□□□□□ -1.22
NF1-209ENST00000479536 MAP10Q9P2G4 905 aa7.42□□□□□ -1.22
NF1-209ENST00000479536 SOS2Q07890 1332 aaPredicted RBP7.42□□□□□ -1.22
NF1-209ENST00000479536 SPTLC1O15269 473 aa7.41□□□□□ -1.22
NF1-209ENST00000479536 TTLL12Q14166 644 aaPredicted RBP7.41□□□□□ -1.22
NF1-209ENST00000479536 TIMELESSQ9UNS1 1208 aa7.41□□□□□ -1.22
NF1-209ENST00000479536 C4orf48Q5BLP8 95 aa7.4□□□□□ -1.22
NF1-209ENST00000479536 CFAP99D6REC4 459 aa7.39□□□□□ -1.23
NF1-209ENST00000479536 F12P00748 615 aaPredicted RBP7.39□□□□□ -1.23
NF1-209ENST00000479536 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.39□□□□□ -1.23
NF1-209ENST00000479536 BPHLQ86WA6 291 aaPredicted RBP7.39□□□□□ -1.23
NF1-209ENST00000479536 ZC3H15Q8WU90 426 aaKnown RBP7.39□□□□□ -1.23
NF1-209ENST00000479536 COL25A1Q9BXS0 654 aaPredicted RBP7.39□□□□□ -1.23
NF1-209ENST00000479536 FSHRP23945 695 aa7.38□□□□□ -1.23
NF1-209ENST00000479536 PTSQ03393 145 aa7.38□□□□□ -1.23
NF1-209ENST00000479536 SVOPQ8N4V2 548 aa7.38□□□□□ -1.23
NF1-209ENST00000479536 TSEN34Q9BSV6 310 aaKnown RBP7.38□□□□□ -1.23
NF1-209ENST00000479536 PCDHB15Q9Y5E8 787 aa7.38□□□□□ -1.23
NF1-209ENST00000479536 FIGNL2A6NMB9 653 aa7.37□□□□□ -1.23
NF1-209ENST00000479536 TTLL8A6PVC2 850 aa7.37□□□□□ -1.23
NF1-209ENST00000479536 ZNF385CQ66K41 422 aaPredicted RBP7.37□□□□□ -1.23
NF1-209ENST00000479536 GPAT2Q6NUI2 795 aa7.37□□□□□ -1.23
NF1-209ENST00000479536 RSBN1LQ6PCB5 846 aaPredicted RBP7.37□□□□□ -1.23
NF1-209ENST00000479536 BEGAINQ9BUH8 593 aa7.37□□□□□ -1.23
NF1-209ENST00000479536 IRS1P35568 1242 aa7.36□□□□□ -1.23
NF1-209ENST00000479536 GIGYF2Q6Y7W6 1299 aaKnown RBP7.36□□□□□ -1.23
NF1-209ENST00000479536 TBC1D2Q9BYX2 928 aa7.36□□□□□ -1.23
NF1-209ENST00000479536 HRCP23327 699 aa7.35□□□□□ -1.23
NF1-209ENST00000479536 GJA5P36382 358 aa7.35□□□□□ -1.23
NF1-209ENST00000479536 BRPF1P55201 1214 aaPredicted RBP7.35□□□□□ -1.23
NF1-209ENST00000479536 RNFT1Q5M7Z0 435 aa7.35□□□□□ -1.23
NF1-209ENST00000479536 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
NF1-209ENST00000479536 ZBTB3Q9H5J0 574 aa7.35□□□□□ -1.23
NF1-209ENST00000479536 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
NF1-209ENST00000479536 ERICH6Q7L0X2 663 aa7.34□□□□□ -1.23
NF1-209ENST00000479536 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
NF1-209ENST00000479536 WHAMMQ8TF30 809 aa7.34□□□□□ -1.23
NF1-209ENST00000479536 TSC1Q92574 1164 aa7.34□□□□□ -1.23
NF1-209ENST00000479536 EMILIN1Q9Y6C2 1016 aa7.34□□□□□ -1.23
NF1-209ENST00000479536 DNMT3AQ9Y6K1 912 aaPredicted RBP7.34□□□□□ -1.23
NF1-209ENST00000479536 MARSP56192 900 aaKnown RBP7.33□□□□□ -1.24
NF1-209ENST00000479536 DIXDC1Q155Q3 683 aa7.33□□□□□ -1.24
NF1-209ENST00000479536 CSPP1Q1MSJ5 1256 aa7.33□□□□□ -1.24
NF1-209ENST00000479536 CCDC116Q8IYX3 515 aa7.33□□□□□ -1.24
NF1-209ENST00000479536 CABLES1Q8TDN4 633 aa7.33□□□□□ -1.24
NF1-209ENST00000479536 NANOS1Q8WY41 292 aaKnown RBP7.33□□□□□ -1.24
NF1-209ENST00000479536 C1QTNF2Q9BXJ5 285 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms