RNA–Protein interactions for RNA: ENST00000479460.5

TRIM59-205, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-205ENST00000479460 TNS1Q9HBL0 1735 aaKnown RBP28.7■■■□□ 2.19
TRIM59-205ENST00000479460 SPATA31A5Q5VU36 1347 aa28.69■■■□□ 2.18
TRIM59-205ENST00000479460 SPATA31A7Q8IWB4 1347 aa28.69■■■□□ 2.18
TRIM59-205ENST00000479460 DISP2A7MBM2 1401 aa28.69■■■□□ 2.18
TRIM59-205ENST00000479460 TULP4Q9NRJ4 1543 aa28.69■■■□□ 2.18
TRIM59-205ENST00000479460 EN1Q05925 392 aaPredicted RBP28.69■■■□□ 2.18
TRIM59-205ENST00000479460 PRR36Q9H6K5 1346 aa28.67■■■□□ 2.18
TRIM59-205ENST00000479460 HIRIP3Q9BW71 556 aaPredicted RBP28.66■■■□□ 2.18
TRIM59-205ENST00000479460 FAM182BQ5T319 152 aa28.65■■■□□ 2.18
TRIM59-205ENST00000479460 TRAK1Q9UPV9 953 aa28.63■■■□□ 2.17
TRIM59-205ENST00000479460 MINK1Q8N4C8 1332 aaPredicted RBP28.63■■■□□ 2.17
TRIM59-205ENST00000479460 WASLO00401 505 aaPredicted RBP28.61■■■□□ 2.17
TRIM59-205ENST00000479460 R3HDM1Q15032 1099 aaKnown RBP28.61■■■□□ 2.17
TRIM59-205ENST00000479460 PRDM11Q9NQV5 511 aa28.61■■■□□ 2.17
TRIM59-205ENST00000479460 ITSN1Q15811 1721 aa28.6■■■□□ 2.17
TRIM59-205ENST00000479460 NGDNQ8NEJ9 315 aaKnown RBP28.59■■■□□ 2.17
TRIM59-205ENST00000479460 PHRF1Q9P1Y6 1649 aaKnown RBP28.58■■■□□ 2.17
TRIM59-205ENST00000479460 PAK3O75914 559 aaPredicted RBP28.57■■■□□ 2.16
TRIM59-205ENST00000479460 SPATA31A1Q5TZJ5 1347 aa28.57■■■□□ 2.16
TRIM59-205ENST00000479460 EZH2Q15910 746 aaKnown RBP28.56■■■□□ 2.16
TRIM59-205ENST00000479460 KIAA0232Q92628 1395 aa28.54■■■□□ 2.16
TRIM59-205ENST00000479460 CAMKK2Q96RR4 588 aa28.54■■■□□ 2.16
TRIM59-205ENST00000479460 FAM196AQ6ZSG2 479 aa28.53■■■□□ 2.16
TRIM59-205ENST00000479460 ATP7BP35670 1465 aa28.53■■■□□ 2.16
TRIM59-205ENST00000479460 ARHGEF28Q8N1W1 1705 aaKnown RBP28.52■■■□□ 2.16
TRIM59-205ENST00000479460 PARD3Q8TEW0 1356 aa28.52■■■□□ 2.16
TRIM59-205ENST00000479460 TRIM37O94972 964 aa28.5■■■□□ 2.15
TRIM59-205ENST00000479460 RREB1Q92766 1687 aa28.5■■■□□ 2.15
TRIM59-205ENST00000479460 CHRNA2Q15822 529 aa28.49■■■□□ 2.15
TRIM59-205ENST00000479460 STRN4Q9NRL3 753 aa28.48■■■□□ 2.15
TRIM59-205ENST00000479460 DCAF11Q8TEB1 546 aa28.47■■■□□ 2.15
TRIM59-205ENST00000479460 NUDT16Q96DE0 195 aaKnown RBP28.47■■■□□ 2.15
TRIM59-205ENST00000479460 STAC3Q96MF2 364 aa28.47■■■□□ 2.15
TRIM59-205ENST00000479460 KDM2AQ9Y2K7 1162 aa28.47■■■□□ 2.15
TRIM59-205ENST00000479460 APBA3O96018 575 aa28.46■■■□□ 2.15
TRIM59-205ENST00000479460 NUP188Q5SRE5 1749 aa28.45■■■□□ 2.14
TRIM59-205ENST00000479460 TOPAZ1Q8N9V7 1692 aa28.45■■■□□ 2.14
TRIM59-205ENST00000479460 ZC3H6P61129 1189 aaKnown RBP28.44■■■□□ 2.14
TRIM59-205ENST00000479460 BARGINQ6ZT62 677 aa28.44■■■□□ 2.14
TRIM59-205ENST00000479460 RAB3GAP2Q9H2M9 1393 aa28.44■■■□□ 2.14
TRIM59-205ENST00000479460 SSH2Q76I76 1423 aa28.43■■■□□ 2.14
TRIM59-205ENST00000479460 NRKQ7Z2Y5 1582 aa28.42■■■□□ 2.14
TRIM59-205ENST00000479460 POLR3AO14802 1390 aaPredicted RBP28.42■■■□□ 2.14
TRIM59-205ENST00000479460 PDE3BQ13370 1112 aa28.41■■■□□ 2.14
TRIM59-205ENST00000479460 USP35Q9P2H5 1018 aa28.41■■■□□ 2.14
TRIM59-205ENST00000479460 LMO7Q8WWI1 1683 aa28.4■■■□□ 2.14
TRIM59-205ENST00000479460 NUTM2GQ5VZR2 741 aa28.4■■■□□ 2.14
TRIM59-205ENST00000479460 CAMTA1Q9Y6Y1 1673 aa28.39■■■□□ 2.14
TRIM59-205ENST00000479460 EVA1CP58658 441 aa28.39■■■□□ 2.14
TRIM59-205ENST00000479460 CDK19Q9BWU1 502 aa28.37■■■□□ 2.13
TRIM59-205ENST00000479460 ACEP12821 1306 aa28.37■■■□□ 2.13
TRIM59-205ENST00000479460 CPDO75976 1380 aa28.37■■■□□ 2.13
TRIM59-205ENST00000479460 NBPF8Q3BBV2 869 aa28.36■■■□□ 2.13
TRIM59-205ENST00000479460 NBPF14Q5TI25 921 aa28.35■■■□□ 2.13
TRIM59-205ENST00000479460 LARP1Q6PKG0 1096 aaKnown RBP28.35■■■□□ 2.13
TRIM59-205ENST00000479460 TCP11L2Q8N4U5 519 aa28.35■■■□□ 2.13
TRIM59-205ENST00000479460 PARP4Q9UKK3 1724 aaKnown RBP28.35■■■□□ 2.13
TRIM59-205ENST00000479460 CCDC61Q9Y6R9 512 aa28.34■■■□□ 2.13
TRIM59-205ENST00000479460 PLEKHG3A1L390 1219 aa28.33■■■□□ 2.13
TRIM59-205ENST00000479460 USP19O94966 1318 aa28.33■■■□□ 2.13
TRIM59-205ENST00000479460 ABTB2Q8N961 1025 aa28.32■■■□□ 2.12
TRIM59-205ENST00000479460 THRAP3Q9Y2W1 955 aaKnown RBP28.32■■■□□ 2.12
TRIM59-205ENST00000479460 KIAA1210Q9ULL0 1709 aa28.29■■■□□ 2.12
TRIM59-205ENST00000479460 C11orf95C9JLR9 678 aaPredicted RBP28.28■■■□□ 2.12
TRIM59-205ENST00000479460 RGPD3A6NKT7 1758 aaPredicted RBP28.28■■■□□ 2.12
TRIM59-205ENST00000479460 RGPD4Q7Z3J3 1758 aa28.28■■■□□ 2.12
TRIM59-205ENST00000479460 YY1P25490 414 aa28.27■■■□□ 2.12
TRIM59-205ENST00000479460 COL5A2P05997 1499 aaPredicted RBP28.27■■■□□ 2.12
TRIM59-205ENST00000479460 SPON1Q9HCB6 807 aa28.26■■■□□ 2.11
TRIM59-205ENST00000479460 PEAK1Q9H792 1746 aa28.26■■■□□ 2.11
TRIM59-205ENST00000479460 NLRP13Q86W25 1043 aa28.25■■■□□ 2.11
TRIM59-205ENST00000479460 GCP02774 474 aa28.24■■■□□ 2.11
TRIM59-205ENST00000479460 SBF2Q86WG5 1849 aa28.24■■■□□ 2.11
TRIM59-205ENST00000479460 KCNQ2O43526 872 aa28.23■■■□□ 2.11
TRIM59-205ENST00000479460 PPP1R1BQ9UD71 204 aaPredicted RBP28.23■■■□□ 2.11
TRIM59-205ENST00000479460 CRB1P82279 1406 aa28.23■■■□□ 2.11
TRIM59-205ENST00000479460 NINLQ9Y2I6 1382 aa28.23■■■□□ 2.11
TRIM59-205ENST00000479460 OVOS2A0A0G2JMS6 1433 aa28.22■■■□□ 2.11
TRIM59-205ENST00000479460 OVOS2A0A0J9YW53 1432 aa28.22■■■□□ 2.11
TRIM59-205ENST00000479460 OVOS2Q6IE36 1432 aa28.22■■■□□ 2.11
TRIM59-205ENST00000479460 BRD4O60885 1362 aaPredicted RBP28.21■■■□□ 2.11
TRIM59-205ENST00000479460 LRRC37A3O60309 1634 aa28.21■■■□□ 2.11
TRIM59-205ENST00000479460 PPIP5K1Q6PFW1 1433 aa28.2■■■□□ 2.11
TRIM59-205ENST00000479460 DCAF8L1A6NGE4 600 aa28.16■■■□□ 2.1
TRIM59-205ENST00000479460 PLSCR1O15162 318 aa28.16■■■□□ 2.1
TRIM59-205ENST00000479460 SRPK2P78362 688 aaKnown RBP28.16■■■□□ 2.1
TRIM59-205ENST00000479460 SLIT3O75094 1523 aa28.16■■■□□ 2.1
TRIM59-205ENST00000479460 CASZ1Q86V15 1759 aa28.16■■■□□ 2.1
TRIM59-205ENST00000479460 WNK3Q9BYP7 1800 aa28.15■■■□□ 2.1
TRIM59-205ENST00000479460 AATKQ6ZMQ8 1374 aa28.15■■■□□ 2.1
TRIM59-205ENST00000479460 COL18A1P39060 1754 aa28.13■■■□□ 2.09
TRIM59-205ENST00000479460 DDB1Q16531 1140 aa28.12■■■□□ 2.09
TRIM59-205ENST00000479460 NBPF1Q3BBV0 1214 aa28.12■■■□□ 2.09
TRIM59-205ENST00000479460 USP6P35125 1406 aa28.11■■■□□ 2.09
TRIM59-205ENST00000479460 CABP2Q9NPB3 220 aa28.11■■■□□ 2.09
TRIM59-205ENST00000479460 CENPJQ9HC77 1338 aaPredicted RBP28.11■■■□□ 2.09
TRIM59-205ENST00000479460 AKAP12Q02952 1782 aa28.11■■■□□ 2.09
TRIM59-205ENST00000479460 QRICH2Q9H0J4 1663 aa28.1■■■□□ 2.09
TRIM59-205ENST00000479460 ZBTB7CA1YPR0 619 aa28.1■■■□□ 2.09
TRIM59-205ENST00000479460 BCL11BQ9C0K0 894 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms