RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 EP400Q96L91 3159 aa19.32■□□□□ 0.68
VCL-205ENST00000478896 HRCP23327 699 aa19.31■□□□□ 0.68
VCL-205ENST00000478896 CRYBG1Q9Y4K1 1723 aa19.31■□□□□ 0.68
VCL-205ENST00000478896 ATP7BP35670 1465 aa19.3■□□□□ 0.68
VCL-205ENST00000478896 BTG4Q9NY30 223 aa19.3■□□□□ 0.68
VCL-205ENST00000478896 KRT27Q7Z3Y8 459 aa19.29■□□□□ 0.68
VCL-205ENST00000478896 FAM98CQ17RN3 349 aaKnown RBP19.27■□□□□ 0.68
VCL-205ENST00000478896 DEFB132Q7Z7B7 95 aa19.27■□□□□ 0.68
VCL-205ENST00000478896 KIAA1210Q9ULL0 1709 aa19.27■□□□□ 0.68
VCL-205ENST00000478896 ONECUT3O60422 494 aaPredicted RBP19.26■□□□□ 0.67
VCL-205ENST00000478896 NUDT16Q96DE0 195 aaKnown RBP19.26■□□□□ 0.67
VCL-205ENST00000478896 PHRF1Q9P1Y6 1649 aaKnown RBP19.25■□□□□ 0.67
VCL-205ENST00000478896 TOPAZ1Q8N9V7 1692 aa19.25■□□□□ 0.67
VCL-205ENST00000478896 PRDM11Q9NQV5 511 aa19.25■□□□□ 0.67
VCL-205ENST00000478896 CDK19Q9BWU1 502 aa19.23■□□□□ 0.67
VCL-205ENST00000478896 KIAA0232Q92628 1395 aa19.2■□□□□ 0.66
VCL-205ENST00000478896 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
VCL-205ENST00000478896 BAG6P46379 1132 aa19.2■□□□□ 0.66
VCL-205ENST00000478896 SPATA31A5Q5VU36 1347 aa19.2■□□□□ 0.66
VCL-205ENST00000478896 SPATA31A7Q8IWB4 1347 aa19.2■□□□□ 0.66
VCL-205ENST00000478896 NUTM2GQ5VZR2 741 aa19.19■□□□□ 0.66
VCL-205ENST00000478896 THSD7AQ9UPZ6 1657 aa19.19■□□□□ 0.66
VCL-205ENST00000478896 ACEP12821 1306 aa19.19■□□□□ 0.66
VCL-205ENST00000478896 POLR3AO14802 1390 aaPredicted RBP19.19■□□□□ 0.66
VCL-205ENST00000478896 CHRNA2Q15822 529 aa19.18■□□□□ 0.66
VCL-205ENST00000478896 STRN4Q9NRL3 753 aa19.18■□□□□ 0.66
VCL-205ENST00000478896 CCDC61Q9Y6R9 512 aa19.18■□□□□ 0.66
VCL-205ENST00000478896 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
VCL-205ENST00000478896 NRKQ7Z2Y5 1582 aa19.17■□□□□ 0.66
VCL-205ENST00000478896 SRPK2P78362 688 aaKnown RBP19.16■□□□□ 0.66
VCL-205ENST00000478896 NBPF1Q3BBV0 1214 aa19.16■□□□□ 0.66
VCL-205ENST00000478896 QRICH2Q9H0J4 1663 aa19.16■□□□□ 0.66
VCL-205ENST00000478896 NBPF8Q3BBV2 869 aa19.15■□□□□ 0.66
VCL-205ENST00000478896 FAM182BQ5T319 152 aa19.15■□□□□ 0.66
VCL-205ENST00000478896 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
VCL-205ENST00000478896 SPATA31A1Q5TZJ5 1347 aa19.14■□□□□ 0.65
VCL-205ENST00000478896 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.65
VCL-205ENST00000478896 PPIP5K1Q6PFW1 1433 aa19.14■□□□□ 0.65
VCL-205ENST00000478896 PLEKHG3A1L390 1219 aa19.13■□□□□ 0.65
VCL-205ENST00000478896 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
VCL-205ENST00000478896 TNS1Q9HBL0 1735 aaKnown RBP19.13■□□□□ 0.65
VCL-205ENST00000478896 EVA1CP58658 441 aa19.12■□□□□ 0.65
VCL-205ENST00000478896 LRP5O75197 1615 aa19.11■□□□□ 0.65
VCL-205ENST00000478896 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
VCL-205ENST00000478896 PSDA5PKW4 1024 aaPredicted RBP19.1■□□□□ 0.65
VCL-205ENST00000478896 EN1Q05925 392 aaPredicted RBP19.1■□□□□ 0.65
VCL-205ENST00000478896 CABP2Q9NPB3 220 aa19.1■□□□□ 0.65
VCL-205ENST00000478896 LMO7Q8WWI1 1683 aa19.09■□□□□ 0.65
VCL-205ENST00000478896 USP19O94966 1318 aa19.08■□□□□ 0.65
VCL-205ENST00000478896 NLRP13Q86W25 1043 aa19.08■□□□□ 0.64
VCL-205ENST00000478896 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.64
VCL-205ENST00000478896 DISP2A7MBM2 1401 aa19.07■□□□□ 0.64
VCL-205ENST00000478896 CPDO75976 1380 aa19.06■□□□□ 0.64
VCL-205ENST00000478896 SRCAPQ6ZRS2 3230 aa19.06■□□□□ 0.64
VCL-205ENST00000478896 FAM196AQ6ZSG2 479 aa19.06■□□□□ 0.64
VCL-205ENST00000478896 TRPM1Q7Z4N2 1603 aa19.06■□□□□ 0.64
VCL-205ENST00000478896 ZBTB7CA1YPR0 619 aa19.05■□□□□ 0.64
VCL-205ENST00000478896 TRIM37O94972 964 aa19.05■□□□□ 0.64
VCL-205ENST00000478896 PDE3BQ13370 1112 aa19.05■□□□□ 0.64
VCL-205ENST00000478896 LARP1Q6PKG0 1096 aaKnown RBP19.05■□□□□ 0.64
VCL-205ENST00000478896 BARGINQ6ZT62 677 aa19.05■□□□□ 0.64
VCL-205ENST00000478896 BRD4O60885 1362 aaPredicted RBP19.05■□□□□ 0.64
VCL-205ENST00000478896 GCP02774 474 aa19.04■□□□□ 0.64
VCL-205ENST00000478896 USP6P35125 1406 aa19.04■□□□□ 0.64
VCL-205ENST00000478896 TCP11L2Q8N4U5 519 aa19.04■□□□□ 0.64
VCL-205ENST00000478896 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
VCL-205ENST00000478896 EZH2Q15910 746 aaKnown RBP19.03■□□□□ 0.64
VCL-205ENST00000478896 CABP1Q9NZU7 370 aa19.03■□□□□ 0.64
VCL-205ENST00000478896 COL5A2P05997 1499 aaPredicted RBP19.03■□□□□ 0.64
VCL-205ENST00000478896 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
VCL-205ENST00000478896 ROCK2O75116 1388 aaKnown RBP19.02■□□□□ 0.64
VCL-205ENST00000478896 APBA3O96018 575 aa19.01■□□□□ 0.63
VCL-205ENST00000478896 NLRP6P59044 892 aa19.01■□□□□ 0.63
VCL-205ENST00000478896 R3HDM1Q15032 1099 aaKnown RBP19.01■□□□□ 0.63
VCL-205ENST00000478896 THRAP3Q9Y2W1 955 aaKnown RBP19.01■□□□□ 0.63
VCL-205ENST00000478896 PIK3C2AO00443 1686 aa19.01■□□□□ 0.63
VCL-205ENST00000478896 PARP4Q9UKK3 1724 aaKnown RBP19■□□□□ 0.63
VCL-205ENST00000478896 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
VCL-205ENST00000478896 SLIT3O75094 1523 aa19■□□□□ 0.63
VCL-205ENST00000478896 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
VCL-205ENST00000478896 CRB1P82279 1406 aa18.99■□□□□ 0.63
VCL-205ENST00000478896 PARD3Q8TEW0 1356 aa18.98■□□□□ 0.63
VCL-205ENST00000478896 RREB1Q92766 1687 aa18.98■□□□□ 0.63
VCL-205ENST00000478896 AKAP12Q02952 1782 aa18.97■□□□□ 0.63
VCL-205ENST00000478896 CAMKK2Q96RR4 588 aa18.97■□□□□ 0.63
VCL-205ENST00000478896 NUP188Q5SRE5 1749 aa18.96■□□□□ 0.63
VCL-205ENST00000478896 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
VCL-205ENST00000478896 LRRC37A3O60309 1634 aa18.95■□□□□ 0.62
VCL-205ENST00000478896 WNK3Q9BYP7 1800 aa18.95■□□□□ 0.62
VCL-205ENST00000478896 TOM1L2Q6ZVM7 507 aa18.94■□□□□ 0.62
VCL-205ENST00000478896 OVOS2A0A0G2JMS6 1433 aa18.93■□□□□ 0.62
VCL-205ENST00000478896 OVOS2A0A0J9YW53 1432 aa18.93■□□□□ 0.62
VCL-205ENST00000478896 OVOS2Q6IE36 1432 aa18.93■□□□□ 0.62
VCL-205ENST00000478896 COL18A1P39060 1754 aa18.93■□□□□ 0.62
VCL-205ENST00000478896 CPSF1Q10570 1443 aaKnown RBP18.92■□□□□ 0.62
VCL-205ENST00000478896 SOX12O15370 315 aa18.92■□□□□ 0.62
VCL-205ENST00000478896 ZNF692Q9BU19 519 aaPredicted RBP18.92■□□□□ 0.62
VCL-205ENST00000478896 RGPD5Q99666 1765 aa18.91■□□□□ 0.62
VCL-205ENST00000478896 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
VCL-205ENST00000478896 TTC21BQ7Z4L5 1316 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms