RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
BRCA1-215ENST00000478531 TMF1P82094 1093 aa9.66□□□□□ -0.86
BRCA1-215ENST00000478531 MYOM1P52179 1685 aa9.66□□□□□ -0.86
BRCA1-215ENST00000478531 ARHGEF10O15013 1369 aa9.66□□□□□ -0.86
BRCA1-215ENST00000478531 CRYBG1Q9Y4K1 1723 aa9.65□□□□□ -0.86
BRCA1-215ENST00000478531 NRKQ7Z2Y5 1582 aa9.65□□□□□ -0.86
BRCA1-215ENST00000478531 ADAMTS2O95450 1211 aa9.65□□□□□ -0.86
BRCA1-215ENST00000478531 USP6P35125 1406 aa9.65□□□□□ -0.87
BRCA1-215ENST00000478531 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-215ENST00000478531 NUTM2GQ5VZR2 741 aa9.64□□□□□ -0.87
BRCA1-215ENST00000478531 PHRF1Q9P1Y6 1649 aaKnown RBP9.64□□□□□ -0.87
BRCA1-215ENST00000478531 PIK3C2AO00443 1686 aa9.64□□□□□ -0.87
BRCA1-215ENST00000478531 CABLES1Q8TDN4 633 aa9.64□□□□□ -0.87
BRCA1-215ENST00000478531 C8orf37Q96NL8 207 aa9.64□□□□□ -0.87
BRCA1-215ENST00000478531 POLR3GLQ9BT43 218 aa9.64□□□□□ -0.87
BRCA1-215ENST00000478531 KTN1Q86UP2 1357 aaKnown RBP9.63□□□□□ -0.87
BRCA1-215ENST00000478531 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
BRCA1-215ENST00000478531 SLC12A5Q9H2X9 1139 aa9.63□□□□□ -0.87
BRCA1-215ENST00000478531 A0A1W2PP64 1363 aa9.62□□□□□ -0.87
BRCA1-215ENST00000478531 ABTB2Q8N961 1025 aa9.62□□□□□ -0.87
BRCA1-215ENST00000478531 CPSF1Q10570 1443 aaKnown RBP9.62□□□□□ -0.87
BRCA1-215ENST00000478531 PLCH1Q4KWH8 1693 aa9.62□□□□□ -0.87
BRCA1-215ENST00000478531 NINLQ9Y2I6 1382 aa9.61□□□□□ -0.87
BRCA1-215ENST00000478531 CDCA8Q53HL2 280 aa9.61□□□□□ -0.87
BRCA1-215ENST00000478531 HDGFL2Q7Z4V5 671 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-215ENST00000478531 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.61□□□□□ -0.87
BRCA1-215ENST00000478531 PUS7Q96PZ0 661 aaKnown RBP9.61□□□□□ -0.87
BRCA1-215ENST00000478531 AFF2P51816 1311 aa9.6□□□□□ -0.87
BRCA1-215ENST00000478531 NGLY1Q96IV0 654 aa9.6□□□□□ -0.87
BRCA1-215ENST00000478531 ZNF692Q9BU19 519 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-215ENST00000478531 TERF2IPQ9NYB0 399 aa9.6□□□□□ -0.87
BRCA1-215ENST00000478531 SSH2Q76I76 1423 aa9.59□□□□□ -0.87
BRCA1-215ENST00000478531 PPP4R3CPQ6ZMV5 832 aa9.59□□□□□ -0.87
BRCA1-215ENST00000478531 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.87
BRCA1-215ENST00000478531 TTC21BQ7Z4L5 1316 aa9.59□□□□□ -0.87
BRCA1-215ENST00000478531 BRD4O60885 1362 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-215ENST00000478531 EDC4Q6P2E9 1401 aaKnown RBP9.59□□□□□ -0.87
BRCA1-215ENST00000478531 RGS17Q9UGC6 210 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-215ENST00000478531 ANKRD36BQ8N2N9 1353 aa9.58□□□□□ -0.88
BRCA1-215ENST00000478531 COL14A1Q05707 1796 aaKnown RBP9.58□□□□□ -0.88
BRCA1-215ENST00000478531 NLRP6P59044 892 aa9.58□□□□□ -0.88
BRCA1-215ENST00000478531 NWD2Q9ULI1 1742 aa9.58□□□□□ -0.88
BRCA1-215ENST00000478531 TTC21AQ8NDW8 1320 aa9.57□□□□□ -0.88
BRCA1-215ENST00000478531 USP54Q70EL1 1684 aa9.57□□□□□ -0.88
BRCA1-215ENST00000478531 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.57□□□□□ -0.88
BRCA1-215ENST00000478531 SOX12O15370 315 aa9.57□□□□□ -0.88
BRCA1-215ENST00000478531 NLRP13Q86W25 1043 aa9.57□□□□□ -0.88
BRCA1-215ENST00000478531 NME9Q86XW9 330 aa9.57□□□□□ -0.88
BRCA1-215ENST00000478531 USP19O94966 1318 aa9.57□□□□□ -0.88
BRCA1-215ENST00000478531 SLIT3O75094 1523 aa9.56□□□□□ -0.88
BRCA1-215ENST00000478531 NRAPQ86VF7 1730 aa9.56□□□□□ -0.88
BRCA1-215ENST00000478531 LTN1O94822 1766 aa9.56□□□□□ -0.88
BRCA1-215ENST00000478531 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
BRCA1-215ENST00000478531 C11orf95C9JLR9 678 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-215ENST00000478531 ZC3H6P61129 1189 aaKnown RBP9.56□□□□□ -0.88
BRCA1-215ENST00000478531 ZNF772Q68DY9 489 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-215ENST00000478531 POTEAQ6S8J7 498 aa9.56□□□□□ -0.88
BRCA1-215ENST00000478531 PRDM11Q9NQV5 511 aa9.56□□□□□ -0.88
BRCA1-215ENST00000478531 USP21Q9UK80 565 aa9.56□□□□□ -0.88
BRCA1-215ENST00000478531 KIAA0232Q92628 1395 aa9.56□□□□□ -0.88
BRCA1-215ENST00000478531 ZRANB1Q9UGI0 708 aa9.55□□□□□ -0.88
BRCA1-215ENST00000478531 NSD3Q9BZ95 1437 aa9.55□□□□□ -0.88
BRCA1-215ENST00000478531 EP400Q96L91 3159 aa9.55□□□□□ -0.88
BRCA1-215ENST00000478531 SLIT2O94813 1529 aa9.55□□□□□ -0.88
BRCA1-215ENST00000478531 CHRNA2Q15822 529 aa9.55□□□□□ -0.88
BRCA1-215ENST00000478531 KIF7Q2M1P5 1343 aa9.55□□□□□ -0.88
BRCA1-215ENST00000478531 ILDR2Q71H61 639 aa9.55□□□□□ -0.88
BRCA1-215ENST00000478531 RGPD5Q99666 1765 aa9.54□□□□□ -0.88
BRCA1-215ENST00000478531 BCL9LQ86UU0 1499 aa9.54□□□□□ -0.88
BRCA1-215ENST00000478531 FAM83GA6ND36 823 aa9.54□□□□□ -0.88
BRCA1-215ENST00000478531 GCP02774 474 aa9.54□□□□□ -0.88
BRCA1-215ENST00000478531 NFAT5O94916 1531 aa9.54□□□□□ -0.88
BRCA1-215ENST00000478531 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-215ENST00000478531 LMO7Q8WWI1 1683 aa9.53□□□□□ -0.88
BRCA1-215ENST00000478531 OVOS2A0A0J9YW53 1432 aa9.53□□□□□ -0.88
BRCA1-215ENST00000478531 OVOS2Q6IE36 1432 aa9.53□□□□□ -0.88
BRCA1-215ENST00000478531 QTRT2Q9H974 415 aaKnown RBP9.53□□□□□ -0.88
BRCA1-215ENST00000478531 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
BRCA1-215ENST00000478531 ANKRD26Q9UPS8 1709 aa9.52□□□□□ -0.88
BRCA1-215ENST00000478531 UNC5CLQ8IV45 518 aa9.52□□□□□ -0.89
BRCA1-215ENST00000478531 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
BRCA1-215ENST00000478531 ATRNO75882 1429 aa9.52□□□□□ -0.89
BRCA1-215ENST00000478531 CPDO75976 1380 aa9.52□□□□□ -0.89
BRCA1-215ENST00000478531 USP31Q70CQ4 1352 aa9.52□□□□□ -0.89
BRCA1-215ENST00000478531 COG3Q96JB2 828 aa9.52□□□□□ -0.89
BRCA1-215ENST00000478531 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
BRCA1-215ENST00000478531 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-215ENST00000478531 CCDC9Q9Y3X0 531 aaKnown RBP9.52□□□□□ -0.89
BRCA1-215ENST00000478531 CCDC7Q96M83 1385 aa9.51□□□□□ -0.89
BRCA1-215ENST00000478531 COL18A1P39060 1754 aa9.51□□□□□ -0.89
BRCA1-215ENST00000478531 ZEB1P37275 1124 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-215ENST00000478531 KCNH5Q8NCM2 988 aa9.51□□□□□ -0.89
BRCA1-215ENST00000478531 PANK3Q9H999 370 aa9.51□□□□□ -0.89
BRCA1-215ENST00000478531 GLI3P10071 1580 aa9.51□□□□□ -0.89
BRCA1-215ENST00000478531 WASHC2AQ641Q2 1341 aa9.5□□□□□ -0.89
BRCA1-215ENST00000478531 CAMTA1Q9Y6Y1 1673 aa9.5□□□□□ -0.89
BRCA1-215ENST00000478531 RXRBP28702 533 aa9.5□□□□□ -0.89
BRCA1-215ENST00000478531 STRN4Q9NRL3 753 aa9.5□□□□□ -0.89
BRCA1-215ENST00000478531 CGNL1Q0VF96 1302 aa9.5□□□□□ -0.89
BRCA1-215ENST00000478531 FYB1O15117 783 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms