RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 V9GY48 417 aaPredicted RBP5.68□□□□□ -1.5
FNDC3B-209ENST00000478016 TRIM32Q13049 653 aa5.67□□□□□ -1.5
FNDC3B-209ENST00000478016 NR6A1Q15406 480 aa5.67□□□□□ -1.5
FNDC3B-209ENST00000478016 LIAT1Q6ZQX7 453 aa5.67□□□□□ -1.5
FNDC3B-209ENST00000478016 NPM2Q86SE8 214 aaKnown RBP5.67□□□□□ -1.5
FNDC3B-209ENST00000478016 NBPF14Q5TI25 921 aa5.66□□□□□ -1.5
FNDC3B-209ENST00000478016 EPS8L1Q8TE68 723 aa5.66□□□□□ -1.5
FNDC3B-209ENST00000478016 EMID1Q96A84 441 aaPredicted RBP5.66□□□□□ -1.5
FNDC3B-209ENST00000478016 GJD4Q96KN9 370 aaPredicted RBP5.66□□□□□ -1.5
FNDC3B-209ENST00000478016 TRIM34Q9BYJ4 488 aa5.66□□□□□ -1.5
FNDC3B-209ENST00000478016 PRM3Q9NNZ6 103 aa5.66□□□□□ -1.5
FNDC3B-209ENST00000478016 FKBPLQ9UIM3 349 aa5.66□□□□□ -1.5
FNDC3B-209ENST00000478016 SPRYD7Q5W111 196 aa5.65□□□□□ -1.5
FNDC3B-209ENST00000478016 GPKOWQ92917 476 aaPredicted RBP eCLIP5.65□□□□□ -1.5
FNDC3B-209ENST00000478016 NDUFB9Q9Y6M9 179 aa5.65□□□□□ -1.5
FNDC3B-209ENST00000478016 ZC3H4Q9UPT8 1303 aaKnown RBP5.65□□□□□ -1.51
FNDC3B-209ENST00000478016 WNT7BP56706 349 aa5.64□□□□□ -1.51
FNDC3B-209ENST00000478016 ZNF598Q86UK7 904 aaKnown RBP5.64□□□□□ -1.51
FNDC3B-209ENST00000478016 ZNF511Q8NB15 262 aa5.64□□□□□ -1.51
FNDC3B-209ENST00000478016 BAP1Q92560 729 aa5.64□□□□□ -1.51
FNDC3B-209ENST00000478016 SH3BP2P78314 561 aa5.63□□□□□ -1.51
FNDC3B-209ENST00000478016 LINC01559Q495D7 138 aa5.63□□□□□ -1.51
FNDC3B-209ENST00000478016 ZNF697Q5TEC3 545 aa5.63□□□□□ -1.51
FNDC3B-209ENST00000478016 UBTFP17480 764 aaKnown RBP5.62□□□□□ -1.51
FNDC3B-209ENST00000478016 SKOR1P84550 965 aa5.62□□□□□ -1.51
FNDC3B-209ENST00000478016 PDXDC2PQ6P474 469 aa5.62□□□□□ -1.51
FNDC3B-209ENST00000478016 RAD21O60216 631 aa5.61□□□□□ -1.51
FNDC3B-209ENST00000478016 AGERQ15109 404 aa5.61□□□□□ -1.51
FNDC3B-209ENST00000478016 SH3BP5LQ7L8J4 393 aa5.61□□□□□ -1.51
FNDC3B-209ENST00000478016 BPHLQ86WA6 291 aaPredicted RBP5.61□□□□□ -1.51
FNDC3B-209ENST00000478016 GDPD2Q9HCC8 539 aa5.61□□□□□ -1.51
FNDC3B-209ENST00000478016 TBC1D2BQ9UPU7 963 aa5.61□□□□□ -1.51
FNDC3B-209ENST00000478016 GPSM3Q9Y4H4 160 aa5.61□□□□□ -1.51
FNDC3B-209ENST00000478016 WNT7AO00755 349 aa5.6□□□□□ -1.51
FNDC3B-209ENST00000478016 GPR37L1O60883 481 aa5.6□□□□□ -1.51
FNDC3B-209ENST00000478016 PTK2Q05397 1052 aa5.6□□□□□ -1.51
FNDC3B-209ENST00000478016 RC3H1Q5TC82 1133 aaKnown RBP5.6□□□□□ -1.51
FNDC3B-209ENST00000478016 EHBP1Q8NDI1 1231 aa5.6□□□□□ -1.51
FNDC3B-209ENST00000478016 COG6Q9Y2V7 657 aa5.6□□□□□ -1.51
FNDC3B-209ENST00000478016 VARSP26640 1264 aaKnown RBP5.59□□□□□ -1.51
FNDC3B-209ENST00000478016 ABL2P42684 1182 aa5.59□□□□□ -1.51
FNDC3B-209ENST00000478016 SH3RF1Q7Z6J0 888 aa5.59□□□□□ -1.51
FNDC3B-209ENST00000478016 WWC1Q8IX03 1113 aa5.59□□□□□ -1.51
FNDC3B-209ENST00000478016 FOXJ1Q92949 421 aa5.59□□□□□ -1.51
FNDC3B-209ENST00000478016 ARHGAP9Q9BRR9 750 aa5.59□□□□□ -1.51
FNDC3B-209ENST00000478016 MAGEB6P1A0A0J9YX57 407 aa5.58□□□□□ -1.52
FNDC3B-209ENST00000478016 ZBBXA8MT70 800 aa5.58□□□□□ -1.52
FNDC3B-209ENST00000478016 FOXC1Q12948 553 aa5.58□□□□□ -1.52
FNDC3B-209ENST00000478016 FAM174AQ8TBP5 190 aa5.58□□□□□ -1.52
FNDC3B-209ENST00000478016 POM121Q96HA1 1249 aa5.58□□□□□ -1.52
FNDC3B-209ENST00000478016 MRGPRX2Q96LB1 330 aa5.58□□□□□ -1.52
FNDC3B-209ENST00000478016 PKD2L1Q9P0L9 805 aa5.58□□□□□ -1.52
FNDC3B-209ENST00000478016 TNFRSF10AO00220 468 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 GDF9O60383 454 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 FBXO45P0C2W1 286 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 PRR20EP86478 221 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 PRR20CP86479 221 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 PRR20DP86480 221 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 PRR20BP86481 221 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 PRR20AP86496 221 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 NR1H3Q13133 447 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 IRF5Q13568 498 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 C4orf48Q5BLP8 95 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 ZBTB33Q86T24 672 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 CARD14Q9BXL6 1004 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 PDZRN3Q9UPQ7 1066 aa5.57□□□□□ -1.52
FNDC3B-209ENST00000478016 A6NJR5 290 aa5.56□□□□□ -1.52
FNDC3B-209ENST00000478016 WASHC4Q2M389 1173 aa5.56□□□□□ -1.52
FNDC3B-209ENST00000478016 TRIM67Q6ZTA4 783 aa5.56□□□□□ -1.52
FNDC3B-209ENST00000478016 C14orf37Q86TY3 774 aa5.56□□□□□ -1.52
FNDC3B-209ENST00000478016 ADAM32Q8TC27 787 aa5.56□□□□□ -1.52
FNDC3B-209ENST00000478016 OCSTAMPQ9BR26 566 aa5.56□□□□□ -1.52
FNDC3B-209ENST00000478016 C1QTNF2Q9BXJ5 285 aa5.56□□□□□ -1.52
FNDC3B-209ENST00000478016 ZNF330Q9Y3S2 320 aaPredicted RBP5.56□□□□□ -1.52
FNDC3B-209ENST00000478016 NISCHQ9Y2I1 1504 aa5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 TTC24A2A3L6 582 aaPredicted RBP5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 SIAH2O43255 324 aa5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 ERFEQ4G0M1 354 aa5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 PROSER2Q86WR7 435 aaPredicted RBP5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 TRMT44Q8IYL2 757 aaKnown RBP5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 CYP4X1Q8N118 509 aa5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 MPNDQ8N594 471 aa5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 SNIP1Q8TAD8 396 aaKnown RBP5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 ZNF592Q92610 1267 aa5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 CLUAP1Q96AJ1 413 aa5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 SLC10A4Q96EP9 437 aa5.55□□□□□ -1.52
FNDC3B-209ENST00000478016 CDV3Q9UKY7 258 aaKnown RBP5.54□□□□□ -1.52
FNDC3B-209ENST00000478016 TLL2Q9Y6L7 1015 aa5.54□□□□□ -1.52
FNDC3B-209ENST00000478016 GFRA3O60609 400 aa5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 ALDH1A1P00352 501 aa5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 MCCD1P59942 119 aaPredicted RBP5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 EIF4G2P78344 907 aaKnown RBP eCLIP5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 VAC14Q08AM6 782 aa5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 LAPTM4AQ15012 233 aa5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 DZIP3Q86Y13 1208 aaKnown RBP5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 CDK15Q96Q40 435 aa5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 IRX2Q9BZI1 471 aaPredicted RBP5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 TOR4AQ9NXH8 423 aa5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 MAP4K5Q9Y4K4 846 aa5.53□□□□□ -1.52
FNDC3B-209ENST00000478016 PCDHB9Q9Y5E1 797 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms