RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 KNSTRNQ9Y448 316 aa15.97■□□□□ 0.15
RTFDC1-207ENST00000477573 SPATA31D1Q6ZQQ2 1576 aa15.97■□□□□ 0.15
RTFDC1-207ENST00000477573 MYO5BQ9ULV0 1848 aa15.97■□□□□ 0.15
RTFDC1-207ENST00000477573 MMP14P50281 582 aa15.96■□□□□ 0.15
RTFDC1-207ENST00000477573 DNTTIP2Q5QJE6 756 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-207ENST00000477573 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-207ENST00000477573 TRAK1Q9UPV9 953 aa15.96■□□□□ 0.14
RTFDC1-207ENST00000477573 GRPEL1Q9HAV7 217 aa15.95■□□□□ 0.14
RTFDC1-207ENST00000477573 PNISRQ8TF01 805 aaKnown RBP15.94■□□□□ 0.14
RTFDC1-207ENST00000477573 NUTM2DQ5VT03 806 aaPredicted RBP15.94■□□□□ 0.14
RTFDC1-207ENST00000477573 TMEM132EQ6IEE7 984 aa15.94■□□□□ 0.14
RTFDC1-207ENST00000477573 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
RTFDC1-207ENST00000477573 CC2D1BQ5T0F9 858 aaKnown RBP15.93■□□□□ 0.14
RTFDC1-207ENST00000477573 CLGNO14967 610 aa15.93■□□□□ 0.14
RTFDC1-207ENST00000477573 ZSCAN30Q86W11 494 aa15.93■□□□□ 0.14
RTFDC1-207ENST00000477573 MYOM1P52179 1685 aa15.93■□□□□ 0.14
RTFDC1-207ENST00000477573 QRICH2Q9H0J4 1663 aa15.93■□□□□ 0.14
RTFDC1-207ENST00000477573 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
RTFDC1-207ENST00000477573 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
RTFDC1-207ENST00000477573 TULP1O00294 542 aaPredicted RBP15.92■□□□□ 0.14
RTFDC1-207ENST00000477573 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
RTFDC1-207ENST00000477573 ASXL1Q8IXJ9 1541 aa15.9■□□□□ 0.14
RTFDC1-207ENST00000477573 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
RTFDC1-207ENST00000477573 BECN1Q14457 450 aa15.9■□□□□ 0.14
RTFDC1-207ENST00000477573 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
RTFDC1-207ENST00000477573 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
RTFDC1-207ENST00000477573 EXOC6Q8TAG9 804 aa15.89■□□□□ 0.13
RTFDC1-207ENST00000477573 A2ML1A8K2U0 1454 aa15.89■□□□□ 0.13
RTFDC1-207ENST00000477573 LRPPRCP42704 1394 aaKnown RBP15.89■□□□□ 0.13
RTFDC1-207ENST00000477573 ARHGEF28Q8N1W1 1705 aaKnown RBP15.89■□□□□ 0.13
RTFDC1-207ENST00000477573 UQCRHLA0A096LP55 91 aa15.88■□□□□ 0.13
RTFDC1-207ENST00000477573 UQCRHP07919 91 aa15.88■□□□□ 0.13
RTFDC1-207ENST00000477573 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
RTFDC1-207ENST00000477573 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
RTFDC1-207ENST00000477573 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.87■□□□□ 0.13
RTFDC1-207ENST00000477573 HDGFP51858 240 aaKnown RBP15.87■□□□□ 0.13
RTFDC1-207ENST00000477573 AXDND1Q5T1B0 1012 aaPredicted RBP15.87■□□□□ 0.13
RTFDC1-207ENST00000477573 MSNP26038 577 aaKnown RBP15.86■□□□□ 0.13
RTFDC1-207ENST00000477573 CCDC173Q0VFZ6 552 aa15.86■□□□□ 0.13
RTFDC1-207ENST00000477573 RIMS2Q9UQ26 1411 aa15.86■□□□□ 0.13
RTFDC1-207ENST00000477573 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
RTFDC1-207ENST00000477573 C8orf34Q49A92 452 aa15.85■□□□□ 0.13
RTFDC1-207ENST00000477573 TNRQ92752 1358 aa15.85■□□□□ 0.13
RTFDC1-207ENST00000477573 ALKQ9UM73 1620 aa15.85■□□□□ 0.13
RTFDC1-207ENST00000477573 INSRP06213 1382 aa15.85■□□□□ 0.13
RTFDC1-207ENST00000477573 HS1BP3Q53T59 392 aa15.85■□□□□ 0.13
RTFDC1-207ENST00000477573 ANTXR1Q9H6X2 564 aa15.85■□□□□ 0.13
RTFDC1-207ENST00000477573 YTHDC2Q9H6S0 1430 aaKnown RBP15.84■□□□□ 0.13
RTFDC1-207ENST00000477573 PPP1R9BQ96SB3 815 aa15.84■□□□□ 0.13
RTFDC1-207ENST00000477573 PTMSP20962 102 aa15.83■□□□□ 0.13
RTFDC1-207ENST00000477573 CSPP1Q1MSJ5 1256 aa15.83■□□□□ 0.13
RTFDC1-207ENST00000477573 YY1AP1Q9H869 796 aa15.83■□□□□ 0.12
RTFDC1-207ENST00000477573 STK26Q9P289 416 aa15.83■□□□□ 0.12
RTFDC1-207ENST00000477573 R3HCC1Q9Y3T6 440 aaKnown RBP15.83■□□□□ 0.12
RTFDC1-207ENST00000477573 ZNF500O60304 480 aaPredicted RBP15.82■□□□□ 0.12
RTFDC1-207ENST00000477573 MCM4P33991 863 aa15.82■□□□□ 0.12
RTFDC1-207ENST00000477573 CNPY4Q8N129 248 aa15.82■□□□□ 0.12
RTFDC1-207ENST00000477573 ZNF622Q969S3 477 aaKnown RBP eCLIP15.82■□□□□ 0.12
RTFDC1-207ENST00000477573 PPP2R1AP30153 589 aa15.81■□□□□ 0.12
RTFDC1-207ENST00000477573 HDAC5Q9UQL6 1122 aa15.8■□□□□ 0.12
RTFDC1-207ENST00000477573 NINLQ9Y2I6 1382 aa15.8■□□□□ 0.12
RTFDC1-207ENST00000477573 PTPRMP28827 1452 aa15.8■□□□□ 0.12
RTFDC1-207ENST00000477573 TRAK2O60296 914 aa15.79■□□□□ 0.12
RTFDC1-207ENST00000477573 IRX5P78411 483 aaPredicted RBP15.79■□□□□ 0.12
RTFDC1-207ENST00000477573 TULP4Q9NRJ4 1543 aa15.79■□□□□ 0.12
RTFDC1-207ENST00000477573 SASS6Q6UVJ0 657 aa15.79■□□□□ 0.12
RTFDC1-207ENST00000477573 CARD14Q9BXL6 1004 aa15.79■□□□□ 0.12
RTFDC1-207ENST00000477573 CGNQ9P2M7 1197 aaKnown RBP15.79■□□□□ 0.12
RTFDC1-207ENST00000477573 PRAM1Q96QH2 718 aa15.78■□□□□ 0.12
RTFDC1-207ENST00000477573 NLRP1Q9C000 1473 aa15.78■□□□□ 0.12
RTFDC1-207ENST00000477573 PSEN1P49768 467 aa15.77■□□□□ 0.12
RTFDC1-207ENST00000477573 SLC12A5Q9H2X9 1139 aa15.77■□□□□ 0.12
RTFDC1-207ENST00000477573 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
RTFDC1-207ENST00000477573 DLC1Q96QB1 1528 aa15.77■□□□□ 0.12
RTFDC1-207ENST00000477573 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.11
RTFDC1-207ENST00000477573 ATAD2Q6PL18 1390 aa15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 PTMAP06454 111 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 TSPYL1Q9H0U9 437 aa15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 GEMIN8Q9NWZ8 242 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 KCNG1Q9UIX4 513 aa15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 ANKRD36BQ8N2N9 1353 aa15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 SRPK2P78362 688 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-207ENST00000477573 UBR1Q8IWV7 1749 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 USP32Q8NFA0 1604 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 DDX11L8A8MPP1 907 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 CENPQQ7L2Z9 268 aaPredicted RBP15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 CGNL1Q0VF96 1302 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 KDM2BQ8NHM5 1336 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 ABCC11Q96J66 1382 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 SETD1AO15047 1707 aaKnown RBP15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 BLMP54132 1417 aaPredicted RBP15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 GZF1Q9H116 711 aaPredicted RBP15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 CABP2Q9NPB3 220 aa15.75■□□□□ 0.11
RTFDC1-207ENST00000477573 FBXO3Q9UK99 471 aa15.74■□□□□ 0.11
RTFDC1-207ENST00000477573 RCAN3Q9UKA8 241 aa15.74■□□□□ 0.11
RTFDC1-207ENST00000477573 MCM5P33992 734 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms