RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 KLHL40Q2TBA0 621 aa16.7■□□□□ 0.26
DFFB-209ENST00000477548 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
DFFB-209ENST00000477548 UQCRHLA0A096LP55 91 aa16.7■□□□□ 0.26
DFFB-209ENST00000477548 UQCRHP07919 91 aa16.7■□□□□ 0.26
DFFB-209ENST00000477548 NCLP19338 710 aaKnown RBP16.7■□□□□ 0.26
DFFB-209ENST00000477548 K7ELQ4 463 aaPredicted RBP16.69■□□□□ 0.26
DFFB-209ENST00000477548 SMC4Q9NTJ3 1288 aa16.69■□□□□ 0.26
DFFB-209ENST00000477548 DDX19BQ9UMR2 479 aa16.69■□□□□ 0.26
DFFB-209ENST00000477548 CLTCL1P53675 1640 aa16.69■□□□□ 0.26
DFFB-209ENST00000477548 BRD2P25440 801 aaKnown RBP16.69■□□□□ 0.26
DFFB-209ENST00000477548 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
DFFB-209ENST00000477548 XPCQ01831 940 aaPredicted RBP16.69■□□□□ 0.26
DFFB-209ENST00000477548 SENP3Q9H4L4 574 aaPredicted RBP16.69■□□□□ 0.26
DFFB-209ENST00000477548 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
DFFB-209ENST00000477548 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
DFFB-209ENST00000477548 MADDQ8WXG6 1647 aa16.68■□□□□ 0.26
DFFB-209ENST00000477548 KIDINS220Q9ULH0 1771 aa16.68■□□□□ 0.26
DFFB-209ENST00000477548 CFAP65Q6ZU64 1925 aaKnown RBP16.68■□□□□ 0.26
DFFB-209ENST00000477548 CD2BP2O95400 341 aaKnown RBP16.68■□□□□ 0.26
DFFB-209ENST00000477548 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
DFFB-209ENST00000477548 IBTKQ9P2D0 1353 aaPredicted RBP16.68■□□□□ 0.26
DFFB-209ENST00000477548 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
DFFB-209ENST00000477548 HS1BP3Q53T59 392 aa16.67■□□□□ 0.26
DFFB-209ENST00000477548 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
DFFB-209ENST00000477548 BAG4O95429 457 aaKnown RBP16.67■□□□□ 0.26
DFFB-209ENST00000477548 BBXQ8WY36 941 aaPredicted RBP16.67■□□□□ 0.26
DFFB-209ENST00000477548 NOL7Q9UMY1 257 aaKnown RBP16.67■□□□□ 0.26
DFFB-209ENST00000477548 PTPRTO14522 1441 aa16.67■□□□□ 0.26
DFFB-209ENST00000477548 TRIM27P14373 513 aa16.66■□□□□ 0.26
DFFB-209ENST00000477548 DEPDC5O75140 1603 aa16.66■□□□□ 0.26
DFFB-209ENST00000477548 CFAP70Q5T0N1 1121 aa16.66■□□□□ 0.26
DFFB-209ENST00000477548 TRPM2O94759 1503 aa16.66■□□□□ 0.26
DFFB-209ENST00000477548 KANK1Q14678 1352 aa16.66■□□□□ 0.26
DFFB-209ENST00000477548 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
DFFB-209ENST00000477548 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
DFFB-209ENST00000477548 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
DFFB-209ENST00000477548 ZNF500O60304 480 aaPredicted RBP16.65■□□□□ 0.26
DFFB-209ENST00000477548 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
DFFB-209ENST00000477548 MTERF4Q7Z6M4 381 aaKnown RBP16.65■□□□□ 0.26
DFFB-209ENST00000477548 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
DFFB-209ENST00000477548 KIF2CQ99661 725 aa16.65■□□□□ 0.26
DFFB-209ENST00000477548 SPHKAPQ2M3C7 1700 aa16.65■□□□□ 0.26
DFFB-209ENST00000477548 ZNF445P59923 1031 aa16.64■□□□□ 0.25
DFFB-209ENST00000477548 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
DFFB-209ENST00000477548 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
DFFB-209ENST00000477548 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
DFFB-209ENST00000477548 IQSEC2Q5JU85 1478 aa16.64■□□□□ 0.25
DFFB-209ENST00000477548 NUCB1Q02818 461 aa16.64■□□□□ 0.25
DFFB-209ENST00000477548 SMAP1Q8IYB5 467 aaPredicted RBP16.64■□□□□ 0.25
DFFB-209ENST00000477548 CSPP1Q1MSJ5 1256 aa16.63■□□□□ 0.25
DFFB-209ENST00000477548 ZSCAN23Q3MJ62 389 aa16.63■□□□□ 0.25
DFFB-209ENST00000477548 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
DFFB-209ENST00000477548 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
DFFB-209ENST00000477548 DYNC1I1O14576 645 aa16.63■□□□□ 0.25
DFFB-209ENST00000477548 NUTM2DQ5VT03 806 aaPredicted RBP16.63■□□□□ 0.25
DFFB-209ENST00000477548 ZNF518AQ6AHZ1 1483 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 VWDEQ8N2E2 1590 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 CLEC17AQ6ZS10 378 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 RBSNQ9H1K0 784 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 TET3O43151 1660 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
DFFB-209ENST00000477548 BMP2KLQ5H9B9 411 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 HOMEZQ8IX15 550 aa16.62■□□□□ 0.25
DFFB-209ENST00000477548 SSH1Q8WYL5 1049 aa16.61■□□□□ 0.25
DFFB-209ENST00000477548 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
DFFB-209ENST00000477548 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
DFFB-209ENST00000477548 CEP152O94986 1710 aa16.61■□□□□ 0.25
DFFB-209ENST00000477548 CT47B1P0C2W7 299 aaPredicted RBP16.61■□□□□ 0.25
DFFB-209ENST00000477548 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
DFFB-209ENST00000477548 NOB1Q9ULX3 412 aaKnown RBP16.61■□□□□ 0.25
DFFB-209ENST00000477548 ZKSCAN5Q9Y2L8 839 aa16.61■□□□□ 0.25
DFFB-209ENST00000477548 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
DFFB-209ENST00000477548 ERVK-7P63135 1459 aa16.6■□□□□ 0.25
DFFB-209ENST00000477548 MTHFSP49914 203 aa16.6■□□□□ 0.25
DFFB-209ENST00000477548 POGZQ7Z3K3 1410 aa16.6■□□□□ 0.25
DFFB-209ENST00000477548 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
DFFB-209ENST00000477548 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
DFFB-209ENST00000477548 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
DFFB-209ENST00000477548 ZBTB40Q9NUA8 1239 aa16.59■□□□□ 0.25
DFFB-209ENST00000477548 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
DFFB-209ENST00000477548 NSD3Q9BZ95 1437 aa16.59■□□□□ 0.25
DFFB-209ENST00000477548 PPRC1Q5VV67 1664 aaKnown RBP16.59■□□□□ 0.25
DFFB-209ENST00000477548 PRIM1P49642 420 aaKnown RBP16.59■□□□□ 0.25
DFFB-209ENST00000477548 FRMPD1Q5SYB0 1578 aa16.58■□□□□ 0.25
DFFB-209ENST00000477548 ANKRD45Q5TZF3 282 aa16.58■□□□□ 0.24
DFFB-209ENST00000477548 SASS6Q6UVJ0 657 aa16.58■□□□□ 0.24
DFFB-209ENST00000477548 TBC1D9Q6ZT07 1266 aa16.58■□□□□ 0.24
DFFB-209ENST00000477548 NUCB2P80303 420 aa16.58■□□□□ 0.24
DFFB-209ENST00000477548 ZHX1Q9UKY1 873 aaPredicted RBP16.57■□□□□ 0.24
DFFB-209ENST00000477548 MCM5P33992 734 aa16.57■□□□□ 0.24
DFFB-209ENST00000477548 KIF16BQ96L93 1317 aa16.57■□□□□ 0.24
DFFB-209ENST00000477548 LMBRD1Q9NUN5 540 aa16.56■□□□□ 0.24
DFFB-209ENST00000477548 NPATQ14207 1427 aa16.56■□□□□ 0.24
DFFB-209ENST00000477548 CCDC39Q9UFE4 941 aa16.56■□□□□ 0.24
DFFB-209ENST00000477548 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
DFFB-209ENST00000477548 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
DFFB-209ENST00000477548 GTF2E1P29083 439 aaPredicted RBP16.55■□□□□ 0.24
DFFB-209ENST00000477548 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms