RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 ALS2Q96Q42 1657 aa25.73■■□□□ 1.71
ABCB1-204ENST00000476862 NWD2Q9ULI1 1742 aa25.72■■□□□ 1.71
ABCB1-204ENST00000476862 PLEKHG3A1L390 1219 aa25.72■■□□□ 1.71
ABCB1-204ENST00000476862 VPS72Q15906 364 aa25.72■■□□□ 1.71
ABCB1-204ENST00000476862 CABP2Q9NPB3 220 aa25.71■■□□□ 1.71
ABCB1-204ENST00000476862 PLCH1Q4KWH8 1693 aa25.71■■□□□ 1.71
ABCB1-204ENST00000476862 QRICH2Q9H0J4 1663 aa25.71■■□□□ 1.71
ABCB1-204ENST00000476862 BTG4Q9NY30 223 aa25.7■■□□□ 1.7
ABCB1-204ENST00000476862 RALGAPBQ86X10 1494 aa25.7■■□□□ 1.7
ABCB1-204ENST00000476862 EVC2Q86UK5 1308 aa25.69■■□□□ 1.7
ABCB1-204ENST00000476862 A0A0G2JS52 829 aa25.69■■□□□ 1.7
ABCB1-204ENST00000476862 MYT1Q01538 1121 aa25.69■■□□□ 1.7
ABCB1-204ENST00000476862 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
ABCB1-204ENST00000476862 TRPM1Q7Z4N2 1603 aa25.69■■□□□ 1.7
ABCB1-204ENST00000476862 POLR3AO14802 1390 aaPredicted RBP25.69■■□□□ 1.7
ABCB1-204ENST00000476862 ABTB2Q8N961 1025 aa25.68■■□□□ 1.7
ABCB1-204ENST00000476862 TONSLQ96HA7 1378 aa25.68■■□□□ 1.7
ABCB1-204ENST00000476862 NUTM2GQ5VZR2 741 aa25.67■■□□□ 1.7
ABCB1-204ENST00000476862 PPIP5K1Q6PFW1 1433 aa25.67■■□□□ 1.7
ABCB1-204ENST00000476862 TOPAZ1Q8N9V7 1692 aa25.66■■□□□ 1.7
ABCB1-204ENST00000476862 COL14A1Q05707 1796 aaKnown RBP25.66■■□□□ 1.7
ABCB1-204ENST00000476862 CCDC125Q86Z20 511 aa25.64■■□□□ 1.7
ABCB1-204ENST00000476862 SEPT12Q8IYM1 358 aa25.64■■□□□ 1.7
ABCB1-204ENST00000476862 GLI3P10071 1580 aa25.64■■□□□ 1.69
ABCB1-204ENST00000476862 NLRP13Q86W25 1043 aa25.63■■□□□ 1.69
ABCB1-204ENST00000476862 CABP1Q9NZU7 370 aa25.63■■□□□ 1.69
ABCB1-204ENST00000476862 ZC3H6P61129 1189 aaKnown RBP25.62■■□□□ 1.69
ABCB1-204ENST00000476862 CARD11Q9BXL7 1154 aa25.61■■□□□ 1.69
ABCB1-204ENST00000476862 BRD4O60885 1362 aaPredicted RBP25.6■■□□□ 1.69
ABCB1-204ENST00000476862 EVA1CP58658 441 aa25.59■■□□□ 1.69
ABCB1-204ENST00000476862 SF3B2Q13435 895 aaKnown RBP25.59■■□□□ 1.69
ABCB1-204ENST00000476862 KIAA0232Q92628 1395 aa25.58■■□□□ 1.69
ABCB1-204ENST00000476862 CHRNA2Q15822 529 aa25.57■■□□□ 1.68
ABCB1-204ENST00000476862 FAM98CQ17RN3 349 aaKnown RBP25.57■■□□□ 1.68
ABCB1-204ENST00000476862 KRT27Q7Z3Y8 459 aa25.57■■□□□ 1.68
ABCB1-204ENST00000476862 STRN4Q9NRL3 753 aa25.57■■□□□ 1.68
ABCB1-204ENST00000476862 CRYBG1Q9Y4K1 1723 aa25.57■■□□□ 1.68
ABCB1-204ENST00000476862 ONECUT3O60422 494 aaPredicted RBP25.56■■□□□ 1.68
ABCB1-204ENST00000476862 ZNF692Q9BU19 519 aaPredicted RBP25.56■■□□□ 1.68
ABCB1-204ENST00000476862 BRWD3Q6RI45 1802 aa25.56■■□□□ 1.68
ABCB1-204ENST00000476862 PHRF1Q9P1Y6 1649 aaKnown RBP25.55■■□□□ 1.68
ABCB1-204ENST00000476862 NRAPQ86VF7 1730 aa25.54■■□□□ 1.68
ABCB1-204ENST00000476862 NLRP6P59044 892 aa25.54■■□□□ 1.68
ABCB1-204ENST00000476862 SPATA31A5Q5VU36 1347 aa25.52■■□□□ 1.68
ABCB1-204ENST00000476862 SPATA31A7Q8IWB4 1347 aa25.52■■□□□ 1.68
ABCB1-204ENST00000476862 ZBTB7CA1YPR0 619 aa25.51■■□□□ 1.67
ABCB1-204ENST00000476862 GCP02774 474 aa25.51■■□□□ 1.67
ABCB1-204ENST00000476862 USP6P35125 1406 aa25.51■■□□□ 1.67
ABCB1-204ENST00000476862 BLMP54132 1417 aaPredicted RBP25.48■■□□□ 1.67
ABCB1-204ENST00000476862 USP19O94966 1318 aa25.48■■□□□ 1.67
ABCB1-204ENST00000476862 ZRANB1Q9UGI0 708 aa25.47■■□□□ 1.67
ABCB1-204ENST00000476862 USP35Q9P2H5 1018 aa25.46■■□□□ 1.67
ABCB1-204ENST00000476862 CPDO75976 1380 aa25.45■■□□□ 1.67
ABCB1-204ENST00000476862 SPATA31A1Q5TZJ5 1347 aa25.45■■□□□ 1.66
ABCB1-204ENST00000476862 TMC1Q8TDI8 760 aa25.45■■□□□ 1.66
ABCB1-204ENST00000476862 SBNO2Q9Y2G9 1366 aa25.44■■□□□ 1.66
ABCB1-204ENST00000476862 NRKQ7Z2Y5 1582 aa25.44■■□□□ 1.66
ABCB1-204ENST00000476862 KTN1Q86UP2 1357 aaKnown RBP25.44■■□□□ 1.66
ABCB1-204ENST00000476862 SLC24A1O60721 1099 aa25.43■■□□□ 1.66
ABCB1-204ENST00000476862 TTC21BQ7Z4L5 1316 aa25.42■■□□□ 1.66
ABCB1-204ENST00000476862 TTC21AQ8NDW8 1320 aa25.42■■□□□ 1.66
ABCB1-204ENST00000476862 KCNH5Q8NCM2 988 aa25.42■■□□□ 1.66
ABCB1-204ENST00000476862 HDGFL2Q7Z4V5 671 aaPredicted RBP25.41■■□□□ 1.66
ABCB1-204ENST00000476862 SSH2Q76I76 1423 aa25.4■■□□□ 1.66
ABCB1-204ENST00000476862 AKAP12Q02952 1782 aa25.4■■□□□ 1.66
ABCB1-204ENST00000476862 BAG6P46379 1132 aa25.39■■□□□ 1.66
ABCB1-204ENST00000476862 PDE3BQ13370 1112 aa25.39■■□□□ 1.66
ABCB1-204ENST00000476862 LARP1Q6PKG0 1096 aaKnown RBP25.39■■□□□ 1.66
ABCB1-204ENST00000476862 EP400Q96L91 3159 aa25.39■■□□□ 1.65
ABCB1-204ENST00000476862 TCP11L2Q8N4U5 519 aa25.38■■□□□ 1.65
ABCB1-204ENST00000476862 CAMTA1Q9Y6Y1 1673 aa25.38■■□□□ 1.65
ABCB1-204ENST00000476862 SOX12O15370 315 aa25.37■■□□□ 1.65
ABCB1-204ENST00000476862 BARGINQ6ZT62 677 aa25.37■■□□□ 1.65
ABCB1-204ENST00000476862 DEFB132Q7Z7B7 95 aa25.37■■□□□ 1.65
ABCB1-204ENST00000476862 THRAP3Q9Y2W1 955 aaKnown RBP25.37■■□□□ 1.65
ABCB1-204ENST00000476862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.36■■□□□ 1.65
ABCB1-204ENST00000476862 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
ABCB1-204ENST00000476862 TERF2IPQ9NYB0 399 aa25.36■■□□□ 1.65
ABCB1-204ENST00000476862 CPSF1Q10570 1443 aaKnown RBP25.35■■□□□ 1.65
ABCB1-204ENST00000476862 PIK3C2AO00443 1686 aa25.35■■□□□ 1.65
ABCB1-204ENST00000476862 AATKQ6ZMQ8 1374 aa25.34■■□□□ 1.65
ABCB1-204ENST00000476862 SLIT3O75094 1523 aa25.34■■□□□ 1.65
ABCB1-204ENST00000476862 FAM182BQ5T319 152 aa25.34■■□□□ 1.65
ABCB1-204ENST00000476862 PUS7Q96PZ0 661 aaKnown RBP25.34■■□□□ 1.65
ABCB1-204ENST00000476862 ST20-MTHFSA0A0A6YYL1 179 aa25.33■■□□□ 1.65
ABCB1-204ENST00000476862 FAM196AQ6ZSG2 479 aa25.33■■□□□ 1.65
ABCB1-204ENST00000476862 TOM1L2Q6ZVM7 507 aa25.33■■□□□ 1.65
ABCB1-204ENST00000476862 LMO7Q8WWI1 1683 aa25.32■■□□□ 1.64
ABCB1-204ENST00000476862 THSD7AQ9UPZ6 1657 aa25.32■■□□□ 1.64
ABCB1-204ENST00000476862 SLC12A5Q9H2X9 1139 aa25.32■■□□□ 1.64
ABCB1-204ENST00000476862 CSB-PGBD3P0DP91 1061 aa25.31■■□□□ 1.64
ABCB1-204ENST00000476862 COL5A2P05997 1499 aaPredicted RBP25.3■■□□□ 1.64
ABCB1-204ENST00000476862 CRB1P82279 1406 aa25.29■■□□□ 1.64
ABCB1-204ENST00000476862 MON2Q7Z3U7 1717 aa25.29■■□□□ 1.64
ABCB1-204ENST00000476862 RGPD1P0DJD0 1748 aa25.29■■□□□ 1.64
ABCB1-204ENST00000476862 ARHGEF25Q86VW2 580 aa25.28■■□□□ 1.64
ABCB1-204ENST00000476862 TIMELESSQ9UNS1 1208 aa25.27■■□□□ 1.64
ABCB1-204ENST00000476862 TMF1P82094 1093 aa25.26■■□□□ 1.63
ABCB1-204ENST00000476862 C11orf95C9JLR9 678 aaPredicted RBP25.25■■□□□ 1.63
ABCB1-204ENST00000476862 TRIM37O94972 964 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms