RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 CCDC61Q9Y6R9 512 aa20.24■□□□□ 0.83
SLC6A8-209ENST00000476466 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
SLC6A8-209ENST00000476466 GLI3P10071 1580 aa20.24■□□□□ 0.83
SLC6A8-209ENST00000476466 PLEKHG3A1L390 1219 aa20.23■□□□□ 0.83
SLC6A8-209ENST00000476466 TRPC5Q9UL62 973 aaPredicted RBP20.23■□□□□ 0.83
SLC6A8-209ENST00000476466 PHRF1Q9P1Y6 1649 aaKnown RBP20.23■□□□□ 0.83
SLC6A8-209ENST00000476466 NRAPQ86VF7 1730 aa20.22■□□□□ 0.83
SLC6A8-209ENST00000476466 SRPK2P78362 688 aaKnown RBP20.22■□□□□ 0.83
SLC6A8-209ENST00000476466 NWD2Q9ULI1 1742 aa20.2■□□□□ 0.82
SLC6A8-209ENST00000476466 PAK3O75914 559 aaPredicted RBP20.2■□□□□ 0.82
SLC6A8-209ENST00000476466 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
SLC6A8-209ENST00000476466 HAP1P54257 671 aaPredicted RBP20.19■□□□□ 0.82
SLC6A8-209ENST00000476466 UNC5CLQ8IV45 518 aa20.19■□□□□ 0.82
SLC6A8-209ENST00000476466 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
SLC6A8-209ENST00000476466 UPF1Q92900 1129 aaKnown RBP eCLIP20.18■□□□□ 0.821e-14■■■■□ 19.7
SLC6A8-209ENST00000476466 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
SLC6A8-209ENST00000476466 CARD11Q9BXL7 1154 aa20.17■□□□□ 0.82
SLC6A8-209ENST00000476466 GJD4Q96KN9 370 aaPredicted RBP20.16■□□□□ 0.82
SLC6A8-209ENST00000476466 CABP1Q9NZU7 370 aa20.16■□□□□ 0.82
SLC6A8-209ENST00000476466 COL14A1Q05707 1796 aaKnown RBP20.16■□□□□ 0.82
SLC6A8-209ENST00000476466 EVC2Q86UK5 1308 aa20.15■□□□□ 0.82
SLC6A8-209ENST00000476466 SBNO2Q9Y2G9 1366 aa20.15■□□□□ 0.82
SLC6A8-209ENST00000476466 USP6P35125 1406 aa20.15■□□□□ 0.82
SLC6A8-209ENST00000476466 SSH2Q76I76 1423 aa20.15■□□□□ 0.82
SLC6A8-209ENST00000476466 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
SLC6A8-209ENST00000476466 KIAA0232Q92628 1395 aa20.13■□□□□ 0.81
SLC6A8-209ENST00000476466 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
SLC6A8-209ENST00000476466 USP19O94966 1318 aa20.12■□□□□ 0.81
SLC6A8-209ENST00000476466 AKAP12Q02952 1782 aa20.12■□□□□ 0.81
SLC6A8-209ENST00000476466 VPS72Q15906 364 aa20.11■□□□□ 0.81
SLC6A8-209ENST00000476466 BTG4Q9NY30 223 aa20.1■□□□□ 0.81
SLC6A8-209ENST00000476466 BRWD3Q6RI45 1802 aa20.1■□□□□ 0.81
SLC6A8-209ENST00000476466 CHRNA2Q15822 529 aa20.09■□□□□ 0.81
SLC6A8-209ENST00000476466 CD163L1Q9NR16 1453 aa20.09■□□□□ 0.81
SLC6A8-209ENST00000476466 CPSF1Q10570 1443 aaKnown RBP20.09■□□□□ 0.81
SLC6A8-209ENST00000476466 SRCAPQ6ZRS2 3230 aa20.08■□□□□ 0.81
SLC6A8-209ENST00000476466 LMO7Q8WWI1 1683 aa20.08■□□□□ 0.81
SLC6A8-209ENST00000476466 ZC3H6P61129 1189 aaKnown RBP20.08■□□□□ 0.81
SLC6A8-209ENST00000476466 ABTB2Q8N961 1025 aa20.08■□□□□ 0.81
SLC6A8-209ENST00000476466 TESK2Q96S53 571 aa20.07■□□□□ 0.8
SLC6A8-209ENST00000476466 PRDM11Q9NQV5 511 aa20.07■□□□□ 0.8
SLC6A8-209ENST00000476466 ATAD2Q6PL18 1390 aa20.07■□□□□ 0.8
SLC6A8-209ENST00000476466 SLIT3O75094 1523 aa20.07■□□□□ 0.8
SLC6A8-209ENST00000476466 MON2Q7Z3U7 1717 aa20.06■□□□□ 0.8
SLC6A8-209ENST00000476466 CAMTA1Q9Y6Y1 1673 aa20.05■□□□□ 0.8
SLC6A8-209ENST00000476466 BRD4O60885 1362 aaPredicted RBP20.04■□□□□ 0.8
SLC6A8-209ENST00000476466 ST20-MTHFSA0A0A6YYL1 179 aa20.03■□□□□ 0.8
SLC6A8-209ENST00000476466 CCDC9Q9Y3X0 531 aaKnown RBP20.03■□□□□ 0.8
SLC6A8-209ENST00000476466 CPDO75976 1380 aa20.03■□□□□ 0.8
SLC6A8-209ENST00000476466 TTC21BQ7Z4L5 1316 aa20.02■□□□□ 0.8
SLC6A8-209ENST00000476466 SEPT12Q8IYM1 358 aa20.02■□□□□ 0.8
SLC6A8-209ENST00000476466 THSD7AQ9UPZ6 1657 aa20.02■□□□□ 0.8
SLC6A8-209ENST00000476466 SPATA31A5Q5VU36 1347 aa20.02■□□□□ 0.79
SLC6A8-209ENST00000476466 SPATA31A7Q8IWB4 1347 aa20.02■□□□□ 0.79
SLC6A8-209ENST00000476466 ONECUT3O60422 494 aaPredicted RBP20.01■□□□□ 0.79
SLC6A8-209ENST00000476466 GCP02774 474 aa20.01■□□□□ 0.79
SLC6A8-209ENST00000476466 USP47Q96K76 1375 aa20■□□□□ 0.79
SLC6A8-209ENST00000476466 FAM98CQ17RN3 349 aaKnown RBP20■□□□□ 0.79
SLC6A8-209ENST00000476466 NLRP13Q86W25 1043 aa20■□□□□ 0.79
SLC6A8-209ENST00000476466 KTN1Q86UP2 1357 aaKnown RBP19.99■□□□□ 0.79
SLC6A8-209ENST00000476466 NLRP6P59044 892 aa19.99■□□□□ 0.79
SLC6A8-209ENST00000476466 SLC12A5Q9H2X9 1139 aa19.99■□□□□ 0.79
SLC6A8-209ENST00000476466 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
SLC6A8-209ENST00000476466 COL18A1P39060 1754 aa19.98■□□□□ 0.79
SLC6A8-209ENST00000476466 NFAT5O94916 1531 aa19.98■□□□□ 0.79
SLC6A8-209ENST00000476466 ZRANB1Q9UGI0 708 aa19.98■□□□□ 0.79
SLC6A8-209ENST00000476466 A0A1W2PP64 1363 aa19.97■□□□□ 0.79
SLC6A8-209ENST00000476466 STRN4Q9NRL3 753 aa19.97■□□□□ 0.79
SLC6A8-209ENST00000476466 COL5A2P05997 1499 aaPredicted RBP19.97■□□□□ 0.79
SLC6A8-209ENST00000476466 SPATA31A1Q5TZJ5 1347 aa19.97■□□□□ 0.79
SLC6A8-209ENST00000476466 USP54Q70EL1 1684 aa19.97■□□□□ 0.79
SLC6A8-209ENST00000476466 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
SLC6A8-209ENST00000476466 LARP1Q6PKG0 1096 aaKnown RBP19.95■□□□□ 0.78
SLC6A8-209ENST00000476466 TMC1Q8TDI8 760 aa19.94■□□□□ 0.78
SLC6A8-209ENST00000476466 TTC21AQ8NDW8 1320 aa19.94■□□□□ 0.78
SLC6A8-209ENST00000476466 NME9Q86XW9 330 aa19.93■□□□□ 0.78
SLC6A8-209ENST00000476466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.93■□□□□ 0.78
SLC6A8-209ENST00000476466 ZBTB7CA1YPR0 619 aa19.92■□□□□ 0.78
SLC6A8-209ENST00000476466 SOX12O15370 315 aa19.92■□□□□ 0.78
SLC6A8-209ENST00000476466 AATKQ6ZMQ8 1374 aa19.92■□□□□ 0.78
SLC6A8-209ENST00000476466 EDC4Q6P2E9 1401 aaKnown RBP19.92■□□□□ 0.78
SLC6A8-209ENST00000476466 A0A0G2JS52 829 aa19.91■□□□□ 0.78
SLC6A8-209ENST00000476466 MYT1Q01538 1121 aa19.91■□□□□ 0.78
SLC6A8-209ENST00000476466 FAM182BQ5T319 152 aa19.91■□□□□ 0.78
SLC6A8-209ENST00000476466 KRT27Q7Z3Y8 459 aa19.91■□□□□ 0.78
SLC6A8-209ENST00000476466 AXIN2Q9Y2T1 843 aa19.91■□□□□ 0.78
SLC6A8-209ENST00000476466 USP31Q70CQ4 1352 aa19.91■□□□□ 0.78
SLC6A8-209ENST00000476466 PUS7Q96PZ0 661 aaKnown RBP19.9■□□□□ 0.78
SLC6A8-209ENST00000476466 USP35Q9P2H5 1018 aa19.9■□□□□ 0.78
SLC6A8-209ENST00000476466 RGPD5Q99666 1765 aa19.9■□□□□ 0.78
SLC6A8-209ENST00000476466 OVOS2A0A0J9YW53 1432 aa19.89■□□□□ 0.77
SLC6A8-209ENST00000476466 OVOS2Q6IE36 1432 aa19.89■□□□□ 0.77
SLC6A8-209ENST00000476466 ARHGEF25Q86VW2 580 aa19.89■□□□□ 0.77
SLC6A8-209ENST00000476466 TIMELESSQ9UNS1 1208 aa19.89■□□□□ 0.77
SLC6A8-209ENST00000476466 MYOM1P52179 1685 aa19.88■□□□□ 0.77
SLC6A8-209ENST00000476466 BLMP54132 1417 aaPredicted RBP19.88■□□□□ 0.77
SLC6A8-209ENST00000476466 CCER1Q8TC90 406 aaPredicted RBP19.88■□□□□ 0.77
SLC6A8-209ENST00000476466 EVA1CP58658 441 aa19.86■□□□□ 0.77
SLC6A8-209ENST00000476466 HDGFL2Q7Z4V5 671 aaPredicted RBP19.86■□□□□ 0.77
SLC6A8-209ENST00000476466 CRB1P82279 1406 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms