RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
HDAC1-206ENST00000476391 MYO5CQ9NQX4 1742 aa16.96■□□□□ 0.31
HDAC1-206ENST00000476391 GPATCH8Q9UKJ3 1502 aaKnown RBP16.96■□□□□ 0.31
HDAC1-206ENST00000476391 DIAPH3Q9NSV4 1193 aa16.96■□□□□ 0.3
HDAC1-206ENST00000476391 CCDC66A2RUB6 948 aa16.95■□□□□ 0.3
HDAC1-206ENST00000476391 PRPF40AO75400 957 aaKnown RBP16.95■□□□□ 0.3
HDAC1-206ENST00000476391 MBD3O95983 291 aa16.95■□□□□ 0.3
HDAC1-206ENST00000476391 DNAJC2Q99543 621 aaKnown RBP16.95■□□□□ 0.3
HDAC1-206ENST00000476391 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
HDAC1-206ENST00000476391 RBM27Q9P2N5 1060 aaKnown RBP16.95■□□□□ 0.3
HDAC1-206ENST00000476391 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
HDAC1-206ENST00000476391 CFAP74Q9C0B2 1584 aa16.95■□□□□ 0.3
HDAC1-206ENST00000476391 U2AF2P26368 475 aaKnown RBP eCLIP16.95■□□□□ 0.3
HDAC1-206ENST00000476391 IRX5P78411 483 aaPredicted RBP16.95■□□□□ 0.3
HDAC1-206ENST00000476391 NUCB1Q02818 461 aa16.95■□□□□ 0.3
HDAC1-206ENST00000476391 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
HDAC1-206ENST00000476391 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
HDAC1-206ENST00000476391 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
HDAC1-206ENST00000476391 PLCD3Q8N3E9 789 aa16.94■□□□□ 0.3
HDAC1-206ENST00000476391 ZBTB22O15209 634 aa16.93■□□□□ 0.3
HDAC1-206ENST00000476391 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
HDAC1-206ENST00000476391 CTIFO43310 598 aaKnown RBP16.92■□□□□ 0.3
HDAC1-206ENST00000476391 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
HDAC1-206ENST00000476391 POLR3AO14802 1390 aaPredicted RBP16.92■□□□□ 0.3
HDAC1-206ENST00000476391 TROQ12816 1431 aaPredicted RBP16.92■□□□□ 0.3
HDAC1-206ENST00000476391 MYOM1P52179 1685 aa16.92■□□□□ 0.3
HDAC1-206ENST00000476391 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
HDAC1-206ENST00000476391 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
HDAC1-206ENST00000476391 CHAF1AQ13111 956 aaPredicted RBP16.92■□□□□ 0.3
HDAC1-206ENST00000476391 RABEP1Q15276 862 aa16.92■□□□□ 0.3
HDAC1-206ENST00000476391 C9orf84Q5VXU9 1444 aa16.92■□□□□ 0.3
HDAC1-206ENST00000476391 UVSSAQ2YD98 709 aa16.91■□□□□ 0.3
HDAC1-206ENST00000476391 TSPY26PQ9H489 355 aa16.91■□□□□ 0.3
HDAC1-206ENST00000476391 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
HDAC1-206ENST00000476391 NUP153P49790 1475 aaKnown RBP16.91■□□□□ 0.3
HDAC1-206ENST00000476391 IGSF3O75054 1194 aa16.91■□□□□ 0.3
HDAC1-206ENST00000476391 RNF214Q8ND24 703 aa16.91■□□□□ 0.3
HDAC1-206ENST00000476391 IQSEC2Q5JU85 1478 aa16.91■□□□□ 0.3
HDAC1-206ENST00000476391 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
HDAC1-206ENST00000476391 RGL3Q3MIN7 710 aa16.9■□□□□ 0.3
HDAC1-206ENST00000476391 FAM184AQ8NB25 1140 aa16.9■□□□□ 0.3
HDAC1-206ENST00000476391 IQGAP1P46940 1657 aa16.9■□□□□ 0.3
HDAC1-206ENST00000476391 KCNJ4P48050 445 aa16.9■□□□□ 0.3
HDAC1-206ENST00000476391 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
HDAC1-206ENST00000476391 REREQ9P2R6 1566 aa16.89■□□□□ 0.29
HDAC1-206ENST00000476391 YEATS2Q9ULM3 1422 aa16.89■□□□□ 0.29
HDAC1-206ENST00000476391 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
HDAC1-206ENST00000476391 SYCP1Q15431 976 aa16.89■□□□□ 0.29
HDAC1-206ENST00000476391 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
HDAC1-206ENST00000476391 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.29
HDAC1-206ENST00000476391 RUNDC1Q96C34 613 aa16.89■□□□□ 0.29
HDAC1-206ENST00000476391 CDC42BPAQ5VT25 1732 aa16.89■□□□□ 0.29
HDAC1-206ENST00000476391 SLFN14P0C7P3 912 aa16.88■□□□□ 0.29
HDAC1-206ENST00000476391 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
HDAC1-206ENST00000476391 SYAP1Q96A49 352 aaPredicted RBP16.88■□□□□ 0.29
HDAC1-206ENST00000476391 TIGD1Q96MW7 591 aa16.88■□□□□ 0.29
HDAC1-206ENST00000476391 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
HDAC1-206ENST00000476391 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
HDAC1-206ENST00000476391 LNPKQ9C0E8 428 aa16.87■□□□□ 0.29
HDAC1-206ENST00000476391 RAPGEF6Q8TEU7 1601 aa16.87■□□□□ 0.29
HDAC1-206ENST00000476391 PKP1Q13835 747 aa16.87■□□□□ 0.29
HDAC1-206ENST00000476391 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
HDAC1-206ENST00000476391 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
HDAC1-206ENST00000476391 RIOK3O14730 519 aaKnown RBP16.86■□□□□ 0.29
HDAC1-206ENST00000476391 PHF14O94880 888 aa16.86■□□□□ 0.29
HDAC1-206ENST00000476391 CFAP44Q96MT7 982 aa16.86■□□□□ 0.29
HDAC1-206ENST00000476391 SHPRHQ149N8 1683 aa16.86■□□□□ 0.29
HDAC1-206ENST00000476391 TRIM27P14373 513 aa16.85■□□□□ 0.29
HDAC1-206ENST00000476391 ITPRIPQ8IWB1 547 aa16.85■□□□□ 0.29
HDAC1-206ENST00000476391 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
HDAC1-206ENST00000476391 FAM193AP78312 1265 aa16.85■□□□□ 0.29
HDAC1-206ENST00000476391 TCP11L2Q8N4U5 519 aa16.85■□□□□ 0.29
HDAC1-206ENST00000476391 TSPYL1Q9H0U9 437 aa16.85■□□□□ 0.29
HDAC1-206ENST00000476391 CTNNA3Q9UI47 895 aa16.85■□□□□ 0.29
HDAC1-206ENST00000476391 NSFL1CQ9UNZ2 370 aaKnown RBP16.85■□□□□ 0.29
HDAC1-206ENST00000476391 PLA2R1Q13018 1463 aa16.84■□□□□ 0.29
HDAC1-206ENST00000476391 TULP2O00295 520 aa16.84■□□□□ 0.29
HDAC1-206ENST00000476391 TTC12Q9H892 705 aaPredicted RBP16.84■□□□□ 0.29
HDAC1-206ENST00000476391 DDX41Q9UJV9 622 aaKnown RBP16.84■□□□□ 0.29
HDAC1-206ENST00000476391 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
HDAC1-206ENST00000476391 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
HDAC1-206ENST00000476391 PRG4Q92954 1404 aaPredicted RBP16.84■□□□□ 0.29
HDAC1-206ENST00000476391 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
HDAC1-206ENST00000476391 CALCOCO1Q9P1Z2 691 aa16.84■□□□□ 0.29
HDAC1-206ENST00000476391 TERF2Q15554 542 aa16.83■□□□□ 0.28
HDAC1-206ENST00000476391 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
HDAC1-206ENST00000476391 MORC2Q9Y6X9 1032 aaPredicted RBP16.83■□□□□ 0.28
HDAC1-206ENST00000476391 KDM5AP29375 1690 aaKnown RBP16.83■□□□□ 0.28
HDAC1-206ENST00000476391 IRX3P78415 501 aaPredicted RBP16.82■□□□□ 0.28
HDAC1-206ENST00000476391 KIAA1524Q8TCG1 905 aa16.82■□□□□ 0.28
HDAC1-206ENST00000476391 CDC45O75419 566 aa16.82■□□□□ 0.28
HDAC1-206ENST00000476391 TPM3P06753 285 aa16.82■□□□□ 0.28
HDAC1-206ENST00000476391 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
HDAC1-206ENST00000476391 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
HDAC1-206ENST00000476391 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
HDAC1-206ENST00000476391 TEX2Q8IWB9 1127 aa16.81■□□□□ 0.28
HDAC1-206ENST00000476391 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
HDAC1-206ENST00000476391 CREBRFQ8IUR6 639 aa16.81■□□□□ 0.28
HDAC1-206ENST00000476391 C17orf53Q8N3J3 647 aaPredicted RBP16.81■□□□□ 0.28
HDAC1-206ENST00000476391 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms