RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 USP6P35125 1406 aa20.06■□□□□ 0.8
CCNL1-217ENST00000476367 NUTM2BA6NNL0 878 aaPredicted RBP20.06■□□□□ 0.8
CCNL1-217ENST00000476367 NUTM2EB1AL46 878 aaPredicted RBP20.06■□□□□ 0.8
CCNL1-217ENST00000476367 PLEKHG5O94827 1062 aa20.06■□□□□ 0.8
CCNL1-217ENST00000476367 NUTM2AQ8IVF1 878 aaPredicted RBP20.06■□□□□ 0.8
CCNL1-217ENST00000476367 SLC12A5Q9H2X9 1139 aa20.05■□□□□ 0.8
CCNL1-217ENST00000476367 CCDC7Q96M83 1385 aa20.04■□□□□ 0.8
CCNL1-217ENST00000476367 CDCA8Q53HL2 280 aa20.04■□□□□ 0.8
CCNL1-217ENST00000476367 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
CCNL1-217ENST00000476367 ARHGEF10O15013 1369 aa20.04■□□□□ 0.8
CCNL1-217ENST00000476367 CPSF1Q10570 1443 aaKnown RBP20.03■□□□□ 0.8
CCNL1-217ENST00000476367 CRYBG1Q9Y4K1 1723 aa20.03■□□□□ 0.8
CCNL1-217ENST00000476367 NINLQ9Y2I6 1382 aa20.02■□□□□ 0.8
CCNL1-217ENST00000476367 MARF1Q9Y4F3 1742 aaKnown RBP20.02■□□□□ 0.8
CCNL1-217ENST00000476367 A0A1W2PP64 1363 aa20.02■□□□□ 0.79
CCNL1-217ENST00000476367 KTN1Q86UP2 1357 aaKnown RBP20.02■□□□□ 0.79
CCNL1-217ENST00000476367 PIK3C2AO00443 1686 aa20.01■□□□□ 0.79
CCNL1-217ENST00000476367 PHRF1Q9P1Y6 1649 aaKnown RBP20■□□□□ 0.79
CCNL1-217ENST00000476367 MEX3CQ5U5Q3 659 aaKnown RBP20■□□□□ 0.79
CCNL1-217ENST00000476367 NUTM2GQ5VZR2 741 aa19.99■□□□□ 0.79
CCNL1-217ENST00000476367 HDGFL2Q7Z4V5 671 aaPredicted RBP19.99■□□□□ 0.79
CCNL1-217ENST00000476367 CABLES1Q8TDN4 633 aa19.98■□□□□ 0.79
CCNL1-217ENST00000476367 TERF2IPQ9NYB0 399 aa19.98■□□□□ 0.79
CCNL1-217ENST00000476367 SSH2Q76I76 1423 aa19.98■□□□□ 0.79
CCNL1-217ENST00000476367 ADAMTS2O95450 1211 aa19.98■□□□□ 0.79
CCNL1-217ENST00000476367 HAP1P54257 671 aaPredicted RBP19.98■□□□□ 0.79
CCNL1-217ENST00000476367 ZNF692Q9BU19 519 aaPredicted RBP19.98■□□□□ 0.79
CCNL1-217ENST00000476367 BRD4O60885 1362 aaPredicted RBP19.97■□□□□ 0.79
CCNL1-217ENST00000476367 ABTB2Q8N961 1025 aa19.97■□□□□ 0.79
CCNL1-217ENST00000476367 ANKRD36BQ8N2N9 1353 aa19.96■□□□□ 0.79
CCNL1-217ENST00000476367 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
CCNL1-217ENST00000476367 TTC21BQ7Z4L5 1316 aa19.95■□□□□ 0.78
CCNL1-217ENST00000476367 CARD14Q9BXL6 1004 aa19.95■□□□□ 0.78
CCNL1-217ENST00000476367 EDC4Q6P2E9 1401 aaKnown RBP19.95■□□□□ 0.78
CCNL1-217ENST00000476367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.94■□□□□ 0.78
CCNL1-217ENST00000476367 C8orf37Q96NL8 207 aa19.93■□□□□ 0.78
CCNL1-217ENST00000476367 TTC21AQ8NDW8 1320 aa19.92■□□□□ 0.78
CCNL1-217ENST00000476367 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
CCNL1-217ENST00000476367 KIF20BQ96Q89 1820 aa19.92■□□□□ 0.78
CCNL1-217ENST00000476367 PLCH1Q4KWH8 1693 aa19.91■□□□□ 0.78
CCNL1-217ENST00000476367 NLRP6P59044 892 aa19.91■□□□□ 0.78
CCNL1-217ENST00000476367 USP54Q70EL1 1684 aa19.9■□□□□ 0.78
CCNL1-217ENST00000476367 NLRP13Q86W25 1043 aa19.9■□□□□ 0.78
CCNL1-217ENST00000476367 PANK3Q9H999 370 aa19.9■□□□□ 0.78
CCNL1-217ENST00000476367 NME9Q86XW9 330 aa19.89■□□□□ 0.77
CCNL1-217ENST00000476367 USP19O94966 1318 aa19.89■□□□□ 0.77
CCNL1-217ENST00000476367 SLIT3O75094 1523 aa19.88■□□□□ 0.77
CCNL1-217ENST00000476367 PER1O15534 1290 aaPredicted RBP19.88■□□□□ 0.77
CCNL1-217ENST00000476367 NGLY1Q96IV0 654 aa19.87■□□□□ 0.77
CCNL1-217ENST00000476367 NSD3Q9BZ95 1437 aa19.87■□□□□ 0.77
CCNL1-217ENST00000476367 AFF2P51816 1311 aa19.87■□□□□ 0.77
CCNL1-217ENST00000476367 ZRANB1Q9UGI0 708 aa19.87■□□□□ 0.77
CCNL1-217ENST00000476367 COL14A1Q05707 1796 aaKnown RBP19.86■□□□□ 0.77
CCNL1-217ENST00000476367 SOX12O15370 315 aa19.84■□□□□ 0.77
CCNL1-217ENST00000476367 RGS17Q9UGC6 210 aaPredicted RBP19.84■□□□□ 0.77
CCNL1-217ENST00000476367 NWD2Q9ULI1 1742 aa19.84■□□□□ 0.77
CCNL1-217ENST00000476367 OVOS2A0A0J9YW53 1432 aa19.84■□□□□ 0.77
CCNL1-217ENST00000476367 OVOS2Q6IE36 1432 aa19.84■□□□□ 0.77
CCNL1-217ENST00000476367 ZC3H6P61129 1189 aaKnown RBP19.84■□□□□ 0.77
CCNL1-217ENST00000476367 KIAA0232Q92628 1395 aa19.83■□□□□ 0.77
CCNL1-217ENST00000476367 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.83■□□□□ 0.76
CCNL1-217ENST00000476367 PRDM11Q9NQV5 511 aa19.83■□□□□ 0.76
CCNL1-217ENST00000476367 USP31Q70CQ4 1352 aa19.83■□□□□ 0.76
CCNL1-217ENST00000476367 LTN1O94822 1766 aa19.82■□□□□ 0.76
CCNL1-217ENST00000476367 GCP02774 474 aa19.82■□□□□ 0.76
CCNL1-217ENST00000476367 DDX10Q13206 875 aaKnown RBP19.82■□□□□ 0.76
CCNL1-217ENST00000476367 NFAT5O94916 1531 aa19.82■□□□□ 0.76
CCNL1-217ENST00000476367 NRAPQ86VF7 1730 aa19.82■□□□□ 0.76
CCNL1-217ENST00000476367 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
CCNL1-217ENST00000476367 SLIT2O94813 1529 aa19.81■□□□□ 0.76
CCNL1-217ENST00000476367 FYB1O15117 783 aa19.8■□□□□ 0.76
CCNL1-217ENST00000476367 CHRNA2Q15822 529 aa19.8■□□□□ 0.76
CCNL1-217ENST00000476367 ANKRD26Q9UPS8 1709 aa19.8■□□□□ 0.76
CCNL1-217ENST00000476367 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
CCNL1-217ENST00000476367 AMER1Q5JTC6 1135 aaPredicted RBP19.8■□□□□ 0.76
CCNL1-217ENST00000476367 GGNBP2Q9H3C7 697 aa19.8■□□□□ 0.76
CCNL1-217ENST00000476367 USP21Q9UK80 565 aa19.8■□□□□ 0.76
CCNL1-217ENST00000476367 ZNF772Q68DY9 489 aaPredicted RBP19.79■□□□□ 0.76
CCNL1-217ENST00000476367 LMO7Q8WWI1 1683 aa19.79■□□□□ 0.76
CCNL1-217ENST00000476367 BCL9LQ86UU0 1499 aa19.78■□□□□ 0.76
CCNL1-217ENST00000476367 FNBP4Q8N3X1 1017 aaPredicted RBP19.78■□□□□ 0.76
CCNL1-217ENST00000476367 COG3Q96JB2 828 aa19.78■□□□□ 0.76
CCNL1-217ENST00000476367 CPDO75976 1380 aa19.77■□□□□ 0.76
CCNL1-217ENST00000476367 POTEAQ6S8J7 498 aa19.77■□□□□ 0.76
CCNL1-217ENST00000476367 KCNH5Q8NCM2 988 aa19.77■□□□□ 0.76
CCNL1-217ENST00000476367 RGPD5Q99666 1765 aa19.77■□□□□ 0.76
CCNL1-217ENST00000476367 CGNL1Q0VF96 1302 aa19.77■□□□□ 0.75
CCNL1-217ENST00000476367 BTG4Q9NY30 223 aa19.76■□□□□ 0.75
CCNL1-217ENST00000476367 COL18A1P39060 1754 aa19.75■□□□□ 0.75
CCNL1-217ENST00000476367 CAMTA1Q9Y6Y1 1673 aa19.74■□□□□ 0.75
CCNL1-217ENST00000476367 UNC5CLQ8IV45 518 aa19.73■□□□□ 0.75
CCNL1-217ENST00000476367 ATRNO75882 1429 aa19.73■□□□□ 0.75
CCNL1-217ENST00000476367 ARHGEF25Q86VW2 580 aa19.72■□□□□ 0.75
CCNL1-217ENST00000476367 QTRT2Q9H974 415 aaKnown RBP19.72■□□□□ 0.75
CCNL1-217ENST00000476367 KNSTRNQ9Y448 316 aa19.72■□□□□ 0.75
CCNL1-217ENST00000476367 FBLN1P23142 703 aa19.71■□□□□ 0.75
CCNL1-217ENST00000476367 TRPC5Q9UL62 973 aaPredicted RBP19.71■□□□□ 0.75
CCNL1-217ENST00000476367 NPC1L1Q9UHC9 1359 aa19.71■□□□□ 0.75
CCNL1-217ENST00000476367 AATKQ6ZMQ8 1374 aa19.7■□□□□ 0.74
CCNL1-217ENST00000476367 STRN4Q9NRL3 753 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms