RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 ITSN1Q15811 1721 aa23.99■■□□□ 1.43
DKC1-208ENST00000475423 CRYBG1Q9Y4K1 1723 aa23.98■■□□□ 1.43
DKC1-208ENST00000475423 BTG4Q9NY30 223 aa23.98■■□□□ 1.43
DKC1-208ENST00000475423 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
DKC1-208ENST00000475423 COL14A1Q05707 1796 aaKnown RBP23.98■■□□□ 1.43
DKC1-208ENST00000475423 CDK19Q9BWU1 502 aa23.97■■□□□ 1.43
DKC1-208ENST00000475423 PAK3O75914 559 aaPredicted RBP23.96■■□□□ 1.43
DKC1-208ENST00000475423 KRT27Q7Z3Y8 459 aa23.95■■□□□ 1.42
DKC1-208ENST00000475423 NBPF1Q3BBV0 1214 aa23.94■■□□□ 1.42
DKC1-208ENST00000475423 CCDC61Q9Y6R9 512 aa23.94■■□□□ 1.42
DKC1-208ENST00000475423 POLR3AO14802 1390 aaPredicted RBP23.93■■□□□ 1.42
DKC1-208ENST00000475423 PLEKHG3A1L390 1219 aa23.91■■□□□ 1.42
DKC1-208ENST00000475423 FAM98CQ17RN3 349 aaKnown RBP23.91■■□□□ 1.42
DKC1-208ENST00000475423 TOPAZ1Q8N9V7 1692 aa23.91■■□□□ 1.42
DKC1-208ENST00000475423 SPATA31A5Q5VU36 1347 aa23.9■■□□□ 1.42
DKC1-208ENST00000475423 SPATA31A7Q8IWB4 1347 aa23.9■■□□□ 1.42
DKC1-208ENST00000475423 NBPF8Q3BBV2 869 aa23.9■■□□□ 1.42
DKC1-208ENST00000475423 DEFB132Q7Z7B7 95 aa23.9■■□□□ 1.42
DKC1-208ENST00000475423 PRDM11Q9NQV5 511 aa23.9■■□□□ 1.42
DKC1-208ENST00000475423 ACEP12821 1306 aa23.89■■□□□ 1.42
DKC1-208ENST00000475423 SF3B2Q13435 895 aaKnown RBP23.88■■□□□ 1.41
DKC1-208ENST00000475423 KIAA0232Q92628 1395 aa23.87■■□□□ 1.41
DKC1-208ENST00000475423 PHRF1Q9P1Y6 1649 aaKnown RBP23.86■■□□□ 1.41
DKC1-208ENST00000475423 A0A0G2JS52 829 aa23.86■■□□□ 1.41
DKC1-208ENST00000475423 MYT1Q01538 1121 aa23.86■■□□□ 1.41
DKC1-208ENST00000475423 CENPJQ9HC77 1338 aaPredicted RBP23.84■■□□□ 1.41
DKC1-208ENST00000475423 CHRNA2Q15822 529 aa23.83■■□□□ 1.41
DKC1-208ENST00000475423 NUTM2GQ5VZR2 741 aa23.83■■□□□ 1.41
DKC1-208ENST00000475423 THSD7AQ9UPZ6 1657 aa23.83■■□□□ 1.4
DKC1-208ENST00000475423 ZC3H6P61129 1189 aaKnown RBP23.82■■□□□ 1.4
DKC1-208ENST00000475423 SPATA31A1Q5TZJ5 1347 aa23.82■■□□□ 1.4
DKC1-208ENST00000475423 L3MBTL2Q969R5 705 aa23.81■■□□□ 1.4
DKC1-208ENST00000475423 SRPK2P78362 688 aaKnown RBP23.8■■□□□ 1.4
DKC1-208ENST00000475423 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
DKC1-208ENST00000475423 PPIP5K1Q6PFW1 1433 aa23.79■■□□□ 1.4
DKC1-208ENST00000475423 CABP2Q9NPB3 220 aa23.79■■□□□ 1.4
DKC1-208ENST00000475423 BAG6P46379 1132 aa23.78■■□□□ 1.4
DKC1-208ENST00000475423 USP19O94966 1318 aa23.78■■□□□ 1.4
DKC1-208ENST00000475423 NRKQ7Z2Y5 1582 aa23.78■■□□□ 1.4
DKC1-208ENST00000475423 CPDO75976 1380 aa23.78■■□□□ 1.4
DKC1-208ENST00000475423 QRICH2Q9H0J4 1663 aa23.77■■□□□ 1.4
DKC1-208ENST00000475423 FAM182BQ5T319 152 aa23.77■■□□□ 1.4
DKC1-208ENST00000475423 STRN4Q9NRL3 753 aa23.77■■□□□ 1.4
DKC1-208ENST00000475423 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
DKC1-208ENST00000475423 NLRP13Q86W25 1043 aa23.75■■□□□ 1.39
DKC1-208ENST00000475423 CAMTA1Q9Y6Y1 1673 aa23.75■■□□□ 1.39
DKC1-208ENST00000475423 RGPD1P0DJD0 1748 aa23.74■■□□□ 1.39
DKC1-208ENST00000475423 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
DKC1-208ENST00000475423 GCP02774 474 aa23.73■■□□□ 1.39
DKC1-208ENST00000475423 EVA1CP58658 441 aa23.73■■□□□ 1.39
DKC1-208ENST00000475423 CABP1Q9NZU7 370 aa23.73■■□□□ 1.39
DKC1-208ENST00000475423 SSH2Q76I76 1423 aa23.73■■□□□ 1.39
DKC1-208ENST00000475423 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
DKC1-208ENST00000475423 BARGINQ6ZT62 677 aa23.72■■□□□ 1.39
DKC1-208ENST00000475423 TRPM1Q7Z4N2 1603 aa23.72■■□□□ 1.39
DKC1-208ENST00000475423 DISP2A7MBM2 1401 aa23.71■■□□□ 1.39
DKC1-208ENST00000475423 USP6P35125 1406 aa23.7■■□□□ 1.38
DKC1-208ENST00000475423 EN1Q05925 392 aaPredicted RBP23.7■■□□□ 1.38
DKC1-208ENST00000475423 LARP1Q6PKG0 1096 aaKnown RBP23.7■■□□□ 1.38
DKC1-208ENST00000475423 FAM196AQ6ZSG2 479 aa23.69■■□□□ 1.38
DKC1-208ENST00000475423 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
DKC1-208ENST00000475423 TNS1Q9HBL0 1735 aaKnown RBP23.69■■□□□ 1.38
DKC1-208ENST00000475423 EVC2Q86UK5 1308 aa23.68■■□□□ 1.38
DKC1-208ENST00000475423 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
DKC1-208ENST00000475423 NLRP6P59044 892 aa23.65■■□□□ 1.38
DKC1-208ENST00000475423 NEUROD1Q13562 356 aa23.65■■□□□ 1.38
DKC1-208ENST00000475423 THRAP3Q9Y2W1 955 aaKnown RBP23.65■■□□□ 1.38
DKC1-208ENST00000475423 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
DKC1-208ENST00000475423 COL5A2P05997 1499 aaPredicted RBP23.64■■□□□ 1.38
DKC1-208ENST00000475423 LRP5O75197 1615 aa23.64■■□□□ 1.38
DKC1-208ENST00000475423 TRIM37O94972 964 aa23.64■■□□□ 1.37
DKC1-208ENST00000475423 SLIT3O75094 1523 aa23.64■■□□□ 1.37
DKC1-208ENST00000475423 PSDA5PKW4 1024 aaPredicted RBP23.63■■□□□ 1.37
DKC1-208ENST00000475423 PDE3BQ13370 1112 aa23.63■■□□□ 1.37
DKC1-208ENST00000475423 CAMKK2Q96RR4 588 aa23.62■■□□□ 1.37
DKC1-208ENST00000475423 AATKQ6ZMQ8 1374 aa23.62■■□□□ 1.37
DKC1-208ENST00000475423 PIK3C2AO00443 1686 aa23.61■■□□□ 1.37
DKC1-208ENST00000475423 EZH2Q15910 746 aaKnown RBP23.61■■□□□ 1.37
DKC1-208ENST00000475423 ZNF692Q9BU19 519 aaPredicted RBP23.61■■□□□ 1.37
DKC1-208ENST00000475423 CRB1P82279 1406 aa23.59■■□□□ 1.37
DKC1-208ENST00000475423 PARD3Q8TEW0 1356 aa23.58■■□□□ 1.37
DKC1-208ENST00000475423 PARP4Q9UKK3 1724 aaKnown RBP23.58■■□□□ 1.37
DKC1-208ENST00000475423 TTC21BQ7Z4L5 1316 aa23.58■■□□□ 1.36
DKC1-208ENST00000475423 COL18A1P39060 1754 aa23.57■■□□□ 1.36
DKC1-208ENST00000475423 AKAP12Q02952 1782 aa23.57■■□□□ 1.36
DKC1-208ENST00000475423 APBA3O96018 575 aa23.57■■□□□ 1.36
DKC1-208ENST00000475423 R3HDM1Q15032 1099 aaKnown RBP23.56■■□□□ 1.36
DKC1-208ENST00000475423 CPSF1Q10570 1443 aaKnown RBP23.56■■□□□ 1.36
DKC1-208ENST00000475423 SBNO2Q9Y2G9 1366 aa23.54■■□□□ 1.36
DKC1-208ENST00000475423 ZBTB7CA1YPR0 619 aa23.54■■□□□ 1.36
DKC1-208ENST00000475423 ARHGEF25Q86VW2 580 aa23.54■■□□□ 1.36
DKC1-208ENST00000475423 AXIN2Q9Y2T1 843 aa23.54■■□□□ 1.36
DKC1-208ENST00000475423 TTC21AQ8NDW8 1320 aa23.54■■□□□ 1.36
DKC1-208ENST00000475423 C11orf95C9JLR9 678 aaPredicted RBP23.53■■□□□ 1.36
DKC1-208ENST00000475423 KCNH5Q8NCM2 988 aa23.53■■□□□ 1.36
DKC1-208ENST00000475423 TOM1L2Q6ZVM7 507 aa23.51■■□□□ 1.35
DKC1-208ENST00000475423 WDR17Q8IZU2 1322 aa23.51■■□□□ 1.35
DKC1-208ENST00000475423 RREB1Q92766 1687 aa23.51■■□□□ 1.35
DKC1-208ENST00000475423 KTN1Q86UP2 1357 aaKnown RBP23.5■■□□□ 1.35
DKC1-208ENST00000475423 PEAK1Q9H792 1746 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms