RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 C8orf37Q96NL8 207 aa22.79■■□□□ 1.24
SRM-204ENST00000475189 USP6P35125 1406 aa22.78■■□□□ 1.24
SRM-204ENST00000475189 BRD4O60885 1362 aaPredicted RBP22.77■■□□□ 1.24
SRM-204ENST00000475189 CRYBG1Q9Y4K1 1723 aa22.77■■□□□ 1.24
SRM-204ENST00000475189 PLEKHG5O94827 1062 aa22.77■■□□□ 1.24
SRM-204ENST00000475189 AFF2P51816 1311 aa22.77■■□□□ 1.24
SRM-204ENST00000475189 CPSF1Q10570 1443 aaKnown RBP22.76■■□□□ 1.23
SRM-204ENST00000475189 TMF1P82094 1093 aa22.76■■□□□ 1.23
SRM-204ENST00000475189 POTEAQ6S8J7 498 aa22.76■■□□□ 1.23
SRM-204ENST00000475189 ZNF692Q9BU19 519 aaPredicted RBP22.76■■□□□ 1.23
SRM-204ENST00000475189 TMC1Q8TDI8 760 aa22.75■■□□□ 1.23
SRM-204ENST00000475189 NGLY1Q96IV0 654 aa22.75■■□□□ 1.23
SRM-204ENST00000475189 SLC12A5Q9H2X9 1139 aa22.75■■□□□ 1.23
SRM-204ENST00000475189 SSH2Q76I76 1423 aa22.74■■□□□ 1.23
SRM-204ENST00000475189 EIF4G2P78344 907 aaKnown RBP eCLIP22.74■■□□□ 1.23
SRM-204ENST00000475189 MON2Q7Z3U7 1717 aa22.74■■□□□ 1.23
SRM-204ENST00000475189 CD163L1Q9NR16 1453 aa22.73■■□□□ 1.23
SRM-204ENST00000475189 HSPA5P11021 654 aaKnown RBP22.73■■□□□ 1.23
SRM-204ENST00000475189 HAP1P54257 671 aaPredicted RBP22.73■■□□□ 1.23
SRM-204ENST00000475189 NUTM2GQ5VZR2 741 aa22.73■■□□□ 1.23
SRM-204ENST00000475189 ZNF772Q68DY9 489 aaPredicted RBP22.73■■□□□ 1.23
SRM-204ENST00000475189 ABTB2Q8N961 1025 aa22.72■■□□□ 1.23
SRM-204ENST00000475189 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
SRM-204ENST00000475189 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
SRM-204ENST00000475189 PHRF1Q9P1Y6 1649 aaKnown RBP22.71■■□□□ 1.23
SRM-204ENST00000475189 FNBP4Q8N3X1 1017 aaPredicted RBP22.7■■□□□ 1.22
SRM-204ENST00000475189 PIK3C2AO00443 1686 aa22.69■■□□□ 1.22
SRM-204ENST00000475189 NINLQ9Y2I6 1382 aa22.69■■□□□ 1.22
SRM-204ENST00000475189 TTC21BQ7Z4L5 1316 aa22.69■■□□□ 1.22
SRM-204ENST00000475189 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
SRM-204ENST00000475189 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
SRM-204ENST00000475189 NLRP13Q86W25 1043 aa22.67■■□□□ 1.22
SRM-204ENST00000475189 TERF2IPQ9NYB0 399 aa22.67■■□□□ 1.22
SRM-204ENST00000475189 USP21Q9UK80 565 aa22.67■■□□□ 1.22
SRM-204ENST00000475189 A0A1W2PP64 1363 aa22.66■■□□□ 1.22
SRM-204ENST00000475189 USP19O94966 1318 aa22.66■■□□□ 1.22
SRM-204ENST00000475189 TTC21AQ8NDW8 1320 aa22.66■■□□□ 1.22
SRM-204ENST00000475189 PLCH1Q4KWH8 1693 aa22.66■■□□□ 1.22
SRM-204ENST00000475189 SLIT2O94813 1529 aa22.66■■□□□ 1.22
SRM-204ENST00000475189 BCL9LQ86UU0 1499 aa22.66■■□□□ 1.22
SRM-204ENST00000475189 FAM83GA6ND36 823 aa22.65■■□□□ 1.22
SRM-204ENST00000475189 NLRP6P59044 892 aa22.65■■□□□ 1.22
SRM-204ENST00000475189 QTRT2Q9H974 415 aaKnown RBP22.65■■□□□ 1.22
SRM-204ENST00000475189 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.64■■□□□ 1.21
SRM-204ENST00000475189 MYOM1P52179 1685 aa22.64■■□□□ 1.21
SRM-204ENST00000475189 NWD2Q9ULI1 1742 aa22.63■■□□□ 1.21
SRM-204ENST00000475189 COL14A1Q05707 1796 aaKnown RBP22.63■■□□□ 1.21
SRM-204ENST00000475189 EDC4Q6P2E9 1401 aaKnown RBP22.62■■□□□ 1.21
SRM-204ENST00000475189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.61■■□□□ 1.21
SRM-204ENST00000475189 SLIT3O75094 1523 aa22.61■■□□□ 1.21
SRM-204ENST00000475189 ANKRD36BQ8N2N9 1353 aa22.61■■□□□ 1.21
SRM-204ENST00000475189 ATRNO75882 1429 aa22.6■■□□□ 1.21
SRM-204ENST00000475189 GCP02774 474 aa22.6■■□□□ 1.21
SRM-204ENST00000475189 ZC3H6P61129 1189 aaKnown RBP22.6■■□□□ 1.21
SRM-204ENST00000475189 UNC5CLQ8IV45 518 aa22.6■■□□□ 1.21
SRM-204ENST00000475189 TRPC5Q9UL62 973 aaPredicted RBP22.6■■□□□ 1.21
SRM-204ENST00000475189 KIAA0232Q92628 1395 aa22.6■■□□□ 1.21
SRM-204ENST00000475189 RXRBP28702 533 aa22.59■■□□□ 1.21
SRM-204ENST00000475189 PRDM11Q9NQV5 511 aa22.59■■□□□ 1.21
SRM-204ENST00000475189 USP54Q70EL1 1684 aa22.58■■□□□ 1.21
SRM-204ENST00000475189 ZRANB1Q9UGI0 708 aa22.58■■□□□ 1.21
SRM-204ENST00000475189 NRAPQ86VF7 1730 aa22.57■■□□□ 1.2
SRM-204ENST00000475189 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
SRM-204ENST00000475189 NME9Q86XW9 330 aa22.57■■□□□ 1.2
SRM-204ENST00000475189 USP31Q70CQ4 1352 aa22.57■■□□□ 1.2
SRM-204ENST00000475189 CPDO75976 1380 aa22.56■■□□□ 1.2
SRM-204ENST00000475189 C11orf95C9JLR9 678 aaPredicted RBP22.56■■□□□ 1.2
SRM-204ENST00000475189 CHRNA2Q15822 529 aa22.56■■□□□ 1.2
SRM-204ENST00000475189 POLR3GLQ9BT43 218 aa22.55■■□□□ 1.2
SRM-204ENST00000475189 BTG4Q9NY30 223 aa22.55■■□□□ 1.2
SRM-204ENST00000475189 CDK12Q9NYV4 1490 aaPredicted RBP22.53■■□□□ 1.2
SRM-204ENST00000475189 VPS72Q15906 364 aa22.52■■□□□ 1.2
SRM-204ENST00000475189 KCNH5Q8NCM2 988 aa22.52■■□□□ 1.2
SRM-204ENST00000475189 GJD4Q96KN9 370 aaPredicted RBP22.52■■□□□ 1.2
SRM-204ENST00000475189 LMO7Q8WWI1 1683 aa22.52■■□□□ 1.2
SRM-204ENST00000475189 CARD14Q9BXL6 1004 aa22.51■■□□□ 1.19
SRM-204ENST00000475189 NFAT5O94916 1531 aa22.51■■□□□ 1.19
SRM-204ENST00000475189 GLI3P10071 1580 aa22.5■■□□□ 1.19
SRM-204ENST00000475189 COL18A1P39060 1754 aa22.5■■□□□ 1.19
SRM-204ENST00000475189 OVOS2A0A0J9YW53 1432 aa22.49■■□□□ 1.19
SRM-204ENST00000475189 OVOS2Q6IE36 1432 aa22.49■■□□□ 1.19
SRM-204ENST00000475189 CAMTA1Q9Y6Y1 1673 aa22.49■■□□□ 1.19
SRM-204ENST00000475189 SOX12O15370 315 aa22.49■■□□□ 1.19
SRM-204ENST00000475189 KIF20BQ96Q89 1820 aa22.48■■□□□ 1.19
SRM-204ENST00000475189 RGS12O14924 1447 aa22.48■■□□□ 1.19
SRM-204ENST00000475189 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
SRM-204ENST00000475189 FYB1O15117 783 aa22.47■■□□□ 1.19
SRM-204ENST00000475189 ARHGEF25Q86VW2 580 aa22.47■■□□□ 1.19
SRM-204ENST00000475189 AATKQ6ZMQ8 1374 aa22.47■■□□□ 1.19
SRM-204ENST00000475189 RGPD5Q99666 1765 aa22.46■■□□□ 1.19
SRM-204ENST00000475189 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
SRM-204ENST00000475189 KIF7Q2M1P5 1343 aa22.46■■□□□ 1.19
SRM-204ENST00000475189 NSD3Q9BZ95 1437 aa22.46■■□□□ 1.19
SRM-204ENST00000475189 COG3Q96JB2 828 aa22.45■■□□□ 1.18
SRM-204ENST00000475189 LTN1O94822 1766 aa22.45■■□□□ 1.18
SRM-204ENST00000475189 GGNBP2Q9H3C7 697 aa22.44■■□□□ 1.18
SRM-204ENST00000475189 STRN4Q9NRL3 753 aa22.44■■□□□ 1.18
SRM-204ENST00000475189 SPATA31A5Q5VU36 1347 aa22.42■■□□□ 1.18
SRM-204ENST00000475189 SPATA31A7Q8IWB4 1347 aa22.42■■□□□ 1.18
SRM-204ENST00000475189 EVA1CP58658 441 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms