RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 AATKQ6ZMQ8 1374 aa28.53■■■□□ 2.16
CCM2-206ENST00000474617 SENP3-EIF4A1A0A087X0R7 540 aa28.53■■■□□ 2.16
CCM2-206ENST00000474617 WDR63Q8IWG1 891 aa28.52■■■□□ 2.16
CCM2-206ENST00000474617 PHF23Q9BUL5 403 aaPredicted RBP28.52■■■□□ 2.16
CCM2-206ENST00000474617 XRN1Q8IZH2 1706 aaKnown RBP28.51■■■□□ 2.15
CCM2-206ENST00000474617 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.51■■■□□ 2.15
CCM2-206ENST00000474617 PTPRUQ92729 1446 aa28.5■■■□□ 2.15
CCM2-206ENST00000474617 PLEKHG3A1L390 1219 aa28.49■■■□□ 2.15
CCM2-206ENST00000474617 SETD1BQ9UPS6 1966 aaKnown RBP28.48■■■□□ 2.15
CCM2-206ENST00000474617 WWC1Q8IX03 1113 aa28.48■■■□□ 2.15
CCM2-206ENST00000474617 TSHZ2Q9NRE2 1034 aa28.48■■■□□ 2.15
CCM2-206ENST00000474617 AMOTL2Q9Y2J4 779 aa28.48■■■□□ 2.15
CCM2-206ENST00000474617 U2AF1L5P0DN76 240 aaPredicted RBP28.47■■■□□ 2.15
CCM2-206ENST00000474617 U2AF1Q01081 240 aaKnown RBP eCLIP28.47■■■□□ 2.15
CCM2-206ENST00000474617 TCP11L2Q8N4U5 519 aa28.46■■■□□ 2.15
CCM2-206ENST00000474617 CCDC136Q96JN2 1154 aa28.46■■■□□ 2.15
CCM2-206ENST00000474617 DIAPH1O60610 1272 aaKnown RBP28.45■■■□□ 2.15
CCM2-206ENST00000474617 SLC26A8Q96RN1 970 aa28.44■■■□□ 2.14
CCM2-206ENST00000474617 CDK12Q9NYV4 1490 aaPredicted RBP28.44■■■□□ 2.14
CCM2-206ENST00000474617 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
CCM2-206ENST00000474617 COG3Q96JB2 828 aa28.43■■■□□ 2.14
CCM2-206ENST00000474617 NRKQ7Z2Y5 1582 aa28.41■■■□□ 2.14
CCM2-206ENST00000474617 B4GALNT3Q6L9W6 998 aa28.41■■■□□ 2.14
CCM2-206ENST00000474617 ANKLE2Q86XL3 938 aa28.41■■■□□ 2.14
CCM2-206ENST00000474617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.41■■■□□ 2.14
CCM2-206ENST00000474617 PRR36Q9H6K5 1346 aa28.41■■■□□ 2.14
CCM2-206ENST00000474617 FCHSD2O94868 740 aa28.38■■■□□ 2.13
CCM2-206ENST00000474617 MYH16Q9H6N6 1097 aa28.38■■■□□ 2.13
CCM2-206ENST00000474617 MAPK8IP3Q9UPT6 1336 aa28.38■■■□□ 2.13
CCM2-206ENST00000474617 POLKQ9UBT6 870 aa28.38■■■□□ 2.13
CCM2-206ENST00000474617 PLEKHF1Q96S99 279 aa28.37■■■□□ 2.13
CCM2-206ENST00000474617 TTC21AQ8NDW8 1320 aa28.37■■■□□ 2.13
CCM2-206ENST00000474617 USP6P35125 1406 aa28.37■■■□□ 2.13
CCM2-206ENST00000474617 CT47B1P0C2W7 299 aaPredicted RBP28.36■■■□□ 2.13
CCM2-206ENST00000474617 IL16Q14005 1332 aa28.35■■■□□ 2.13
CCM2-206ENST00000474617 NEFMP07197 916 aa28.35■■■□□ 2.13
CCM2-206ENST00000474617 U2SURPO15042 1029 aaKnown RBP28.34■■■□□ 2.13
CCM2-206ENST00000474617 MAP2P11137 1827 aaKnown RBP28.34■■■□□ 2.13
CCM2-206ENST00000474617 TTC21BQ7Z4L5 1316 aa28.33■■■□□ 2.13
CCM2-206ENST00000474617 ACEP12821 1306 aa28.32■■■□□ 2.12
CCM2-206ENST00000474617 NME9Q86XW9 330 aa28.32■■■□□ 2.12
CCM2-206ENST00000474617 PLPPR3Q6T4P5 718 aa28.31■■■□□ 2.12
CCM2-206ENST00000474617 SSH2Q76I76 1423 aa28.31■■■□□ 2.12
CCM2-206ENST00000474617 EXOC6Q8TAG9 804 aa28.3■■■□□ 2.12
CCM2-206ENST00000474617 OVOS2A0A0J9YW53 1432 aa28.3■■■□□ 2.12
CCM2-206ENST00000474617 OVOS2Q6IE36 1432 aa28.3■■■□□ 2.12
CCM2-206ENST00000474617 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
CCM2-206ENST00000474617 SPINK5Q9NQ38 1064 aaPredicted RBP28.29■■■□□ 2.12
CCM2-206ENST00000474617 TMPOP42166 694 aaKnown RBP28.28■■■□□ 2.12
CCM2-206ENST00000474617 NALCNQ8IZF0 1738 aa28.28■■■□□ 2.12
CCM2-206ENST00000474617 LRRC7Q96NW7 1537 aa28.28■■■□□ 2.12
CCM2-206ENST00000474617 USP31Q70CQ4 1352 aa28.27■■■□□ 2.12
CCM2-206ENST00000474617 FMN2Q9NZ56 1722 aa28.26■■■□□ 2.11
CCM2-206ENST00000474617 AAMPQ13685 434 aa28.25■■■□□ 2.11
CCM2-206ENST00000474617 PDE3AQ14432 1141 aa28.25■■■□□ 2.11
CCM2-206ENST00000474617 CALD1Q05682 793 aaKnown RBP28.24■■■□□ 2.11
CCM2-206ENST00000474617 NEUROD2Q15784 382 aa28.23■■■□□ 2.11
CCM2-206ENST00000474617 KCNA6P17658 529 aa28.23■■■□□ 2.11
CCM2-206ENST00000474617 IL13P35225 146 aa28.23■■■□□ 2.11
CCM2-206ENST00000474617 RSPH6AQ9H0K4 717 aa28.23■■■□□ 2.11
CCM2-206ENST00000474617 RRP7AQ9Y3A4 280 aaKnown RBP28.23■■■□□ 2.11
CCM2-206ENST00000474617 NCKAP5LQ9HCH0 1330 aa28.22■■■□□ 2.11
CCM2-206ENST00000474617 DMRT2Q9Y5R5 561 aa28.22■■■□□ 2.11
CCM2-206ENST00000474617 CRBNQ96SW2 442 aa28.21■■■□□ 2.11
CCM2-206ENST00000474617 NPHP4O75161 1426 aaPredicted RBP28.2■■■□□ 2.11
CCM2-206ENST00000474617 PLIN1O60240 522 aa28.2■■■□□ 2.1
CCM2-206ENST00000474617 USP54Q70EL1 1684 aa28.19■■■□□ 2.1
CCM2-206ENST00000474617 PPM1GO15355 546 aaPredicted RBP28.18■■■□□ 2.1
CCM2-206ENST00000474617 LMOD3Q0VAK6 560 aa28.18■■■□□ 2.1
CCM2-206ENST00000474617 EMILIN1Q9Y6C2 1016 aa28.18■■■□□ 2.1
CCM2-206ENST00000474617 KIF24Q5T7B8 1368 aa28.18■■■□□ 2.1
CCM2-206ENST00000474617 NGDNQ8NEJ9 315 aaKnown RBP28.18■■■□□ 2.1
CCM2-206ENST00000474617 RIPK4P57078 832 aa28.17■■■□□ 2.1
CCM2-206ENST00000474617 TRIM35Q9UPQ4 493 aa28.17■■■□□ 2.1
CCM2-206ENST00000474617 NFE2L2Q16236 605 aa28.15■■■□□ 2.1
CCM2-206ENST00000474617 MS4A1P11836 297 aa28.14■■■□□ 2.1
CCM2-206ENST00000474617 PRKAR2BP31323 418 aa28.14■■■□□ 2.1
CCM2-206ENST00000474617 RARSP54136 660 aaKnown RBP28.14■■■□□ 2.1
CCM2-206ENST00000474617 ZNF428Q96B54 188 aa28.14■■■□□ 2.1
CCM2-206ENST00000474617 ADGRL3Q9HAR2 1447 aa28.14■■■□□ 2.1
CCM2-206ENST00000474617 NWD1Q149M9 1564 aa28.14■■■□□ 2.09
CCM2-206ENST00000474617 RBM19Q9Y4C8 960 aaKnown RBP28.13■■■□□ 2.09
CCM2-206ENST00000474617 ZRANB1Q9UGI0 708 aa28.12■■■□□ 2.09
CCM2-206ENST00000474617 FANCIQ9NVI1 1328 aa28.1■■■□□ 2.09
CCM2-206ENST00000474617 TCERG1O14776 1098 aaKnown RBP28.09■■■□□ 2.09
CCM2-206ENST00000474617 CANXP27824 592 aaKnown RBP28.09■■■□□ 2.09
CCM2-206ENST00000474617 CENPQQ7L2Z9 268 aaPredicted RBP28.09■■■□□ 2.09
CCM2-206ENST00000474617 RGPD8O14715 1765 aaPredicted RBP28.09■■■□□ 2.09
CCM2-206ENST00000474617 SBNO1A3KN83 1393 aa28.09■■■□□ 2.09
CCM2-206ENST00000474617 BCAR3O75815 825 aa28.08■■■□□ 2.09
CCM2-206ENST00000474617 C20orf194Q5TEA3 1177 aa28.08■■■□□ 2.09
CCM2-206ENST00000474617 RRS1Q15050 365 aaKnown RBP28.08■■■□□ 2.08
CCM2-206ENST00000474617 FLT4P35916 1363 aa28.07■■■□□ 2.08
CCM2-206ENST00000474617 NUTM2FA1L443 756 aa28.07■■■□□ 2.08
CCM2-206ENST00000474617 PIK3C2AO00443 1686 aa28.06■■■□□ 2.08
CCM2-206ENST00000474617 PMFBP1Q8TBY8 1022 aa28.06■■■□□ 2.08
CCM2-206ENST00000474617 ARHGEF10O15013 1369 aa28.05■■■□□ 2.08
CCM2-206ENST00000474617 RGPD1P0DJD0 1748 aa28.04■■■□□ 2.08
CCM2-206ENST00000474617 FBLN1P23142 703 aa28.02■■■□□ 2.08
CCM2-206ENST00000474617 EIF4A2Q14240 407 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms