RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 TRPC5Q9UL62 973 aaPredicted RBP22.63■■□□□ 1.21
ITGB1-210ENST00000474568 ALS2Q96Q42 1657 aa22.62■■□□□ 1.21
ITGB1-210ENST00000474568 RBM6P78332 1123 aaKnown RBP22.62■■□□□ 1.21
ITGB1-210ENST00000474568 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
ITGB1-210ENST00000474568 BCL9LQ86UU0 1499 aa22.6■■□□□ 1.21
ITGB1-210ENST00000474568 ABTB2Q8N961 1025 aa22.6■■□□□ 1.21
ITGB1-210ENST00000474568 SBNO2Q9Y2G9 1366 aa22.6■■□□□ 1.21
ITGB1-210ENST00000474568 FAM83GA6ND36 823 aa22.59■■□□□ 1.21
ITGB1-210ENST00000474568 TIMELESSQ9UNS1 1208 aa22.59■■□□□ 1.21
ITGB1-210ENST00000474568 ATRNO75882 1429 aa22.58■■□□□ 1.21
ITGB1-210ENST00000474568 ABCA3Q99758 1704 aa22.58■■□□□ 1.21
ITGB1-210ENST00000474568 UNC5CLQ8IV45 518 aa22.58■■□□□ 1.21
ITGB1-210ENST00000474568 ATAD2Q6PL18 1390 aa22.58■■□□□ 1.21
ITGB1-210ENST00000474568 SLIT2O94813 1529 aa22.57■■□□□ 1.2
ITGB1-210ENST00000474568 MARF1Q9Y4F3 1742 aaKnown RBP22.57■■□□□ 1.2
ITGB1-210ENST00000474568 TMC1Q8TDI8 760 aa22.57■■□□□ 1.2
ITGB1-210ENST00000474568 USP6P35125 1406 aa22.57■■□□□ 1.2
ITGB1-210ENST00000474568 RGS12O14924 1447 aa22.56■■□□□ 1.2
ITGB1-210ENST00000474568 USP47Q96K76 1375 aa22.55■■□□□ 1.2
ITGB1-210ENST00000474568 ZC3H6P61129 1189 aaKnown RBP22.55■■□□□ 1.2
ITGB1-210ENST00000474568 TESK2Q96S53 571 aa22.55■■□□□ 1.2
ITGB1-210ENST00000474568 PRDM11Q9NQV5 511 aa22.54■■□□□ 1.2
ITGB1-210ENST00000474568 CCDC9Q9Y3X0 531 aaKnown RBP22.54■■□□□ 1.2
ITGB1-210ENST00000474568 CHRNA2Q15822 529 aa22.53■■□□□ 1.2
ITGB1-210ENST00000474568 GJD4Q96KN9 370 aaPredicted RBP22.53■■□□□ 1.2
ITGB1-210ENST00000474568 BTG4Q9NY30 223 aa22.53■■□□□ 1.2
ITGB1-210ENST00000474568 CDK12Q9NYV4 1490 aaPredicted RBP22.53■■□□□ 1.2
ITGB1-210ENST00000474568 NLRP13Q86W25 1043 aa22.52■■□□□ 1.2
ITGB1-210ENST00000474568 KIAA0232Q92628 1395 aa22.51■■□□□ 1.19
ITGB1-210ENST00000474568 NLRP6P59044 892 aa22.51■■□□□ 1.19
ITGB1-210ENST00000474568 SLC12A5Q9H2X9 1139 aa22.51■■□□□ 1.19
ITGB1-210ENST00000474568 ZNF692Q9BU19 519 aaPredicted RBP22.5■■□□□ 1.19
ITGB1-210ENST00000474568 TTC21BQ7Z4L5 1316 aa22.5■■□□□ 1.19
ITGB1-210ENST00000474568 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
ITGB1-210ENST00000474568 KTN1Q86UP2 1357 aaKnown RBP22.5■■□□□ 1.19
ITGB1-210ENST00000474568 CRYBG1Q9Y4K1 1723 aa22.49■■□□□ 1.19
ITGB1-210ENST00000474568 ZBTB7CA1YPR0 619 aa22.49■■□□□ 1.19
ITGB1-210ENST00000474568 USP19O94966 1318 aa22.49■■□□□ 1.19
ITGB1-210ENST00000474568 PLCH1Q4KWH8 1693 aa22.49■■□□□ 1.19
ITGB1-210ENST00000474568 SSH2Q76I76 1423 aa22.48■■□□□ 1.19
ITGB1-210ENST00000474568 VPS72Q15906 364 aa22.48■■□□□ 1.19
ITGB1-210ENST00000474568 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
ITGB1-210ENST00000474568 PHRF1Q9P1Y6 1649 aaKnown RBP22.47■■□□□ 1.19
ITGB1-210ENST00000474568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.47■■□□□ 1.199e-7■■■□□ 16.9
ITGB1-210ENST00000474568 GCP02774 474 aa22.46■■□□□ 1.19
ITGB1-210ENST00000474568 HDGFL2Q7Z4V5 671 aaPredicted RBP22.46■■□□□ 1.19
ITGB1-210ENST00000474568 SOX12O15370 315 aa22.45■■□□□ 1.18
ITGB1-210ENST00000474568 TMF1P82094 1093 aa22.45■■□□□ 1.18
ITGB1-210ENST00000474568 STRN4Q9NRL3 753 aa22.45■■□□□ 1.18
ITGB1-210ENST00000474568 NRKQ7Z2Y5 1582 aa22.45■■□□□ 1.18
ITGB1-210ENST00000474568 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.45■■□□□ 1.18
ITGB1-210ENST00000474568 GLI3P10071 1580 aa22.44■■□□□ 1.18
ITGB1-210ENST00000474568 COL14A1Q05707 1796 aaKnown RBP22.44■■□□□ 1.18
ITGB1-210ENST00000474568 CD163L1Q9NR16 1453 aa22.44■■□□□ 1.18
ITGB1-210ENST00000474568 ZRANB1Q9UGI0 708 aa22.44■■□□□ 1.18
ITGB1-210ENST00000474568 PUS7Q96PZ0 661 aaKnown RBP22.43■■□□□ 1.18
ITGB1-210ENST00000474568 TTC21AQ8NDW8 1320 aa22.42■■□□□ 1.18
ITGB1-210ENST00000474568 TERF2IPQ9NYB0 399 aa22.42■■□□□ 1.18
ITGB1-210ENST00000474568 NWD2Q9ULI1 1742 aa22.42■■□□□ 1.18
ITGB1-210ENST00000474568 A0A1W2PP64 1363 aa22.41■■□□□ 1.18
ITGB1-210ENST00000474568 AKAP12Q02952 1782 aa22.41■■□□□ 1.18
ITGB1-210ENST00000474568 A0A0G2JS52 829 aa22.41■■□□□ 1.18
ITGB1-210ENST00000474568 SLC24A1O60721 1099 aa22.41■■□□□ 1.18
ITGB1-210ENST00000474568 MYT1Q01538 1121 aa22.41■■□□□ 1.18
ITGB1-210ENST00000474568 NME9Q86XW9 330 aa22.41■■□□□ 1.18
ITGB1-210ENST00000474568 UPF1Q92900 1129 aaKnown RBP eCLIP22.41■■□□□ 1.18
ITGB1-210ENST00000474568 PIK3C2AO00443 1686 aa22.41■■□□□ 1.18
ITGB1-210ENST00000474568 EVA1CP58658 441 aa22.39■■□□□ 1.17
ITGB1-210ENST00000474568 FAM98CQ17RN3 349 aaKnown RBP22.39■■□□□ 1.17
ITGB1-210ENST00000474568 SEPT12Q8IYM1 358 aa22.39■■□□□ 1.17
ITGB1-210ENST00000474568 NRAPQ86VF7 1730 aa22.39■■□□□ 1.17
ITGB1-210ENST00000474568 CPDO75976 1380 aa22.38■■□□□ 1.17
ITGB1-210ENST00000474568 SLIT3O75094 1523 aa22.37■■□□□ 1.17
ITGB1-210ENST00000474568 SPATA31A5Q5VU36 1347 aa22.36■■□□□ 1.17
ITGB1-210ENST00000474568 SPATA31A7Q8IWB4 1347 aa22.36■■□□□ 1.17
ITGB1-210ENST00000474568 USP35Q9P2H5 1018 aa22.36■■□□□ 1.17
ITGB1-210ENST00000474568 MON2Q7Z3U7 1717 aa22.36■■□□□ 1.17
ITGB1-210ENST00000474568 EDC4Q6P2E9 1401 aaKnown RBP22.35■■□□□ 1.17
ITGB1-210ENST00000474568 HSPA5P11021 654 aaKnown RBP22.35■■□□□ 1.17
ITGB1-210ENST00000474568 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
ITGB1-210ENST00000474568 NINLQ9Y2I6 1382 aa22.35■■□□□ 1.17
ITGB1-210ENST00000474568 CAMTA1Q9Y6Y1 1673 aa22.34■■□□□ 1.17
ITGB1-210ENST00000474568 EIF4G2P78344 907 aaKnown RBP eCLIP22.34■■□□□ 1.17
ITGB1-210ENST00000474568 CDCA8Q53HL2 280 aa22.34■■□□□ 1.17
ITGB1-210ENST00000474568 LARP1Q6PKG0 1096 aaKnown RBP22.34■■□□□ 1.17
ITGB1-210ENST00000474568 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
ITGB1-210ENST00000474568 SPATA31A1Q5TZJ5 1347 aa22.31■■□□□ 1.16
ITGB1-210ENST00000474568 USP31Q70CQ4 1352 aa22.31■■□□□ 1.16
ITGB1-210ENST00000474568 ONECUT3O60422 494 aaPredicted RBP22.31■■□□□ 1.16
ITGB1-210ENST00000474568 AATKQ6ZMQ8 1374 aa22.3■■□□□ 1.16
ITGB1-210ENST00000474568 ANKRD36BQ8N2N9 1353 aa22.3■■□□□ 1.16
ITGB1-210ENST00000474568 ARHGEF25Q86VW2 580 aa22.3■■□□□ 1.16
ITGB1-210ENST00000474568 LMO7Q8WWI1 1683 aa22.3■■□□□ 1.16
ITGB1-210ENST00000474568 KRT27Q7Z3Y8 459 aa22.29■■□□□ 1.16
ITGB1-210ENST00000474568 AXIN2Q9Y2T1 843 aa22.29■■□□□ 1.16
ITGB1-210ENST00000474568 COL5A2P05997 1499 aaPredicted RBP22.28■■□□□ 1.16
ITGB1-210ENST00000474568 NFAT5O94916 1531 aa22.26■■□□□ 1.15
ITGB1-210ENST00000474568 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
ITGB1-210ENST00000474568 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
ITGB1-210ENST00000474568 OVOS2Q6IE36 1432 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms