RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 CABP2Q9NPB3 220 aa18.52■□□□□ 0.56
BRAT1-205ENST00000473879 ACEP12821 1306 aa18.51■□□□□ 0.55
BRAT1-205ENST00000473879 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
BRAT1-205ENST00000473879 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
BRAT1-205ENST00000473879 CRYBG1Q9Y4K1 1723 aa18.51■□□□□ 0.55
BRAT1-205ENST00000473879 USP21Q9UK80 565 aa18.5■□□□□ 0.55
BRAT1-205ENST00000473879 NRKQ7Z2Y5 1582 aa18.5■□□□□ 0.55
BRAT1-205ENST00000473879 AKAP12Q02952 1782 aa18.5■□□□□ 0.55
BRAT1-205ENST00000473879 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.49■□□□□ 0.55
BRAT1-205ENST00000473879 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
BRAT1-205ENST00000473879 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
BRAT1-205ENST00000473879 CABLES1Q8TDN4 633 aa18.49■□□□□ 0.55
BRAT1-205ENST00000473879 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
BRAT1-205ENST00000473879 CD163L1Q9NR16 1453 aa18.48■□□□□ 0.55
BRAT1-205ENST00000473879 PAK3O75914 559 aaPredicted RBP18.48■□□□□ 0.55
BRAT1-205ENST00000473879 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
BRAT1-205ENST00000473879 CDK12Q9NYV4 1490 aaPredicted RBP18.47■□□□□ 0.55
BRAT1-205ENST00000473879 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
BRAT1-205ENST00000473879 TRPC5Q9UL62 973 aaPredicted RBP18.47■□□□□ 0.55
BRAT1-205ENST00000473879 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
BRAT1-205ENST00000473879 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
BRAT1-205ENST00000473879 ATAD2Q6PL18 1390 aa18.46■□□□□ 0.55
BRAT1-205ENST00000473879 PLCH1Q4KWH8 1693 aa18.46■□□□□ 0.55
BRAT1-205ENST00000473879 CPSF1Q10570 1443 aaKnown RBP18.46■□□□□ 0.55
BRAT1-205ENST00000473879 MYOM1P52179 1685 aa18.45■□□□□ 0.54
BRAT1-205ENST00000473879 CABP1Q9NZU7 370 aa18.45■□□□□ 0.54
BRAT1-205ENST00000473879 ATRNO75882 1429 aa18.45■□□□□ 0.54
BRAT1-205ENST00000473879 SLIT2O94813 1529 aa18.44■□□□□ 0.54
BRAT1-205ENST00000473879 BRD4O60885 1362 aaPredicted RBP18.44■□□□□ 0.54
BRAT1-205ENST00000473879 NWD2Q9ULI1 1742 aa18.44■□□□□ 0.54
BRAT1-205ENST00000473879 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
BRAT1-205ENST00000473879 PLEKHG5O94827 1062 aa18.44■□□□□ 0.54
BRAT1-205ENST00000473879 PHRF1Q9P1Y6 1649 aaKnown RBP18.44■□□□□ 0.54
BRAT1-205ENST00000473879 UNC5CLQ8IV45 518 aa18.43■□□□□ 0.54
BRAT1-205ENST00000473879 USP54Q70EL1 1684 aa18.43■□□□□ 0.54
BRAT1-205ENST00000473879 USP6P35125 1406 aa18.41■□□□□ 0.54
BRAT1-205ENST00000473879 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
BRAT1-205ENST00000473879 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
BRAT1-205ENST00000473879 PIK3C2AO00443 1686 aa18.39■□□□□ 0.53
BRAT1-205ENST00000473879 ABTB2Q8N961 1025 aa18.39■□□□□ 0.53
BRAT1-205ENST00000473879 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.53
BRAT1-205ENST00000473879 NRAPQ86VF7 1730 aa18.39■□□□□ 0.53
BRAT1-205ENST00000473879 CCDC7Q96M83 1385 aa18.39■□□□□ 0.53
BRAT1-205ENST00000473879 RGS12O14924 1447 aa18.39■□□□□ 0.53
BRAT1-205ENST00000473879 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
BRAT1-205ENST00000473879 GJD4Q96KN9 370 aaPredicted RBP18.38■□□□□ 0.53
BRAT1-205ENST00000473879 TMF1P82094 1093 aa18.37■□□□□ 0.53
BRAT1-205ENST00000473879 NUTM2GQ5VZR2 741 aa18.37■□□□□ 0.53
BRAT1-205ENST00000473879 WASHC2AQ641Q2 1341 aa18.36■□□□□ 0.53
BRAT1-205ENST00000473879 NLRP13Q86W25 1043 aa18.36■□□□□ 0.53
BRAT1-205ENST00000473879 USP19O94966 1318 aa18.35■□□□□ 0.53
BRAT1-205ENST00000473879 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
BRAT1-205ENST00000473879 VPS72Q15906 364 aa18.35■□□□□ 0.53
BRAT1-205ENST00000473879 GLI3P10071 1580 aa18.34■□□□□ 0.53
BRAT1-205ENST00000473879 CDCA8Q53HL2 280 aa18.34■□□□□ 0.53
BRAT1-205ENST00000473879 SLIT3O75094 1523 aa18.33■□□□□ 0.53
BRAT1-205ENST00000473879 A0A1W2PP64 1363 aa18.33■□□□□ 0.53
BRAT1-205ENST00000473879 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.52
BRAT1-205ENST00000473879 BTG4Q9NY30 223 aa18.33■□□□□ 0.52
BRAT1-205ENST00000473879 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
BRAT1-205ENST00000473879 C11orf95C9JLR9 678 aaPredicted RBP18.32■□□□□ 0.52
BRAT1-205ENST00000473879 TTC21BQ7Z4L5 1316 aa18.31■□□□□ 0.52
BRAT1-205ENST00000473879 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
BRAT1-205ENST00000473879 GCP02774 474 aa18.31■□□□□ 0.52
BRAT1-205ENST00000473879 NLRP6P59044 892 aa18.31■□□□□ 0.52
BRAT1-205ENST00000473879 ZC3H6P61129 1189 aaKnown RBP18.31■□□□□ 0.52
BRAT1-205ENST00000473879 DIEXFQ68CQ4 756 aaKnown RBP18.31■□□□□ 0.52
BRAT1-205ENST00000473879 EDC4Q6P2E9 1401 aaKnown RBP18.31■□□□□ 0.52
BRAT1-205ENST00000473879 CPDO75976 1380 aa18.3■□□□□ 0.52
BRAT1-205ENST00000473879 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
BRAT1-205ENST00000473879 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
BRAT1-205ENST00000473879 TMC1Q8TDI8 760 aa18.3■□□□□ 0.52
BRAT1-205ENST00000473879 UPF1Q92900 1129 aaKnown RBP eCLIP18.29■□□□□ 0.52
BRAT1-205ENST00000473879 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
BRAT1-205ENST00000473879 ONECUT3O60422 494 aaPredicted RBP18.28■□□□□ 0.52
BRAT1-205ENST00000473879 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
BRAT1-205ENST00000473879 CHRNA2Q15822 529 aa18.28■□□□□ 0.52
BRAT1-205ENST00000473879 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
BRAT1-205ENST00000473879 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
BRAT1-205ENST00000473879 CCDC9Q9Y3X0 531 aaKnown RBP18.28■□□□□ 0.52
BRAT1-205ENST00000473879 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
BRAT1-205ENST00000473879 LMO7Q8WWI1 1683 aa18.28■□□□□ 0.52
BRAT1-205ENST00000473879 TERF2IPQ9NYB0 399 aa18.27■□□□□ 0.52
BRAT1-205ENST00000473879 OVOS2A0A0J9YW53 1432 aa18.26■□□□□ 0.51
BRAT1-205ENST00000473879 OVOS2Q6IE36 1432 aa18.26■□□□□ 0.51
BRAT1-205ENST00000473879 NFAT5O94916 1531 aa18.26■□□□□ 0.51
BRAT1-205ENST00000473879 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
BRAT1-205ENST00000473879 SPATA31A5Q5VU36 1347 aa18.24■□□□□ 0.51
BRAT1-205ENST00000473879 SPATA31A7Q8IWB4 1347 aa18.24■□□□□ 0.51
BRAT1-205ENST00000473879 EP400Q96L91 3159 aa18.24■□□□□ 0.51
BRAT1-205ENST00000473879 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
BRAT1-205ENST00000473879 SEPT12Q8IYM1 358 aa18.23■□□□□ 0.51
BRAT1-205ENST00000473879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.22■□□□□ 0.51
BRAT1-205ENST00000473879 ABCC6O95255 1503 aa18.22■□□□□ 0.51
BRAT1-205ENST00000473879 COL18A1P39060 1754 aa18.22■□□□□ 0.51
BRAT1-205ENST00000473879 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
BRAT1-205ENST00000473879 AATKQ6ZMQ8 1374 aa18.21■□□□□ 0.51
BRAT1-205ENST00000473879 EVA1CP58658 441 aa18.21■□□□□ 0.51
BRAT1-205ENST00000473879 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
BRAT1-205ENST00000473879 KIF20BQ96Q89 1820 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms