RNA–Protein interactions for RNA: ENST00000473724.1

SBF1-206, Transcript of SET binding factor 1, humanhuman

TSL 2

Gene SBF1, Length 446 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-206ENST00000473724 CCDC9Q9Y3X0 531 aaKnown RBP19.1■□□□□ 0.65
SBF1-206ENST00000473724 NGDNQ8NEJ9 315 aaKnown RBP19.09■□□□□ 0.65
SBF1-206ENST00000473724 ATP7BP35670 1465 aa19.09■□□□□ 0.65
SBF1-206ENST00000473724 BTG4Q9NY30 223 aa19.07■□□□□ 0.64
SBF1-206ENST00000473724 TOPAZ1Q8N9V7 1692 aa19.06■□□□□ 0.64
SBF1-206ENST00000473724 KRT27Q7Z3Y8 459 aa19.06■□□□□ 0.64
SBF1-206ENST00000473724 NUDT16Q96DE0 195 aaKnown RBP19.06■□□□□ 0.64
SBF1-206ENST00000473724 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
SBF1-206ENST00000473724 SF3B2Q13435 895 aaKnown RBP19.03■□□□□ 0.64
SBF1-206ENST00000473724 CDK19Q9BWU1 502 aa19.03■□□□□ 0.64
SBF1-206ENST00000473724 PHRF1Q9P1Y6 1649 aaKnown RBP19.03■□□□□ 0.64
SBF1-206ENST00000473724 FAM98CQ17RN3 349 aaKnown RBP19.02■□□□□ 0.64
SBF1-206ENST00000473724 DEFB132Q7Z7B7 95 aa19.01■□□□□ 0.63
SBF1-206ENST00000473724 POLR3AO14802 1390 aaPredicted RBP19.01■□□□□ 0.63
SBF1-206ENST00000473724 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
SBF1-206ENST00000473724 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
SBF1-206ENST00000473724 A0A0G2JS52 829 aa19■□□□□ 0.63
SBF1-206ENST00000473724 MYT1Q01538 1121 aa19■□□□□ 0.63
SBF1-206ENST00000473724 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
SBF1-206ENST00000473724 THSD7AQ9UPZ6 1657 aa18.99■□□□□ 0.63
SBF1-206ENST00000473724 CCDC61Q9Y6R9 512 aa18.99■□□□□ 0.63
SBF1-206ENST00000473724 RGPD1P0DJD0 1748 aa18.98■□□□□ 0.63
SBF1-206ENST00000473724 PLEKHG3A1L390 1219 aa18.98■□□□□ 0.63
SBF1-206ENST00000473724 ACEP12821 1306 aa18.98■□□□□ 0.63
SBF1-206ENST00000473724 KIAA0232Q92628 1395 aa18.97■□□□□ 0.63
SBF1-206ENST00000473724 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
SBF1-206ENST00000473724 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
SBF1-206ENST00000473724 BAG6P46379 1132 aa18.94■□□□□ 0.62
SBF1-206ENST00000473724 QRICH2Q9H0J4 1663 aa18.94■□□□□ 0.62
SBF1-206ENST00000473724 SPATA31A1Q5TZJ5 1347 aa18.94■□□□□ 0.62
SBF1-206ENST00000473724 NRKQ7Z2Y5 1582 aa18.93■□□□□ 0.62
SBF1-206ENST00000473724 CHRNA2Q15822 529 aa18.93■□□□□ 0.62
SBF1-206ENST00000473724 NUTM2GQ5VZR2 741 aa18.93■□□□□ 0.62
SBF1-206ENST00000473724 CENPJQ9HC77 1338 aaPredicted RBP18.93■□□□□ 0.62
SBF1-206ENST00000473724 TNS1Q9HBL0 1735 aaKnown RBP18.92■□□□□ 0.62
SBF1-206ENST00000473724 ZC3H6P61129 1189 aaKnown RBP18.92■□□□□ 0.62
SBF1-206ENST00000473724 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
SBF1-206ENST00000473724 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
SBF1-206ENST00000473724 LRP5O75197 1615 aa18.9■□□□□ 0.62
SBF1-206ENST00000473724 LMO7Q8WWI1 1683 aa18.9■□□□□ 0.62
SBF1-206ENST00000473724 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
SBF1-206ENST00000473724 STRN4Q9NRL3 753 aa18.9■□□□□ 0.62
SBF1-206ENST00000473724 USP19O94966 1318 aa18.9■□□□□ 0.62
SBF1-206ENST00000473724 CPDO75976 1380 aa18.9■□□□□ 0.62
SBF1-206ENST00000473724 FAM182BQ5T319 152 aa18.89■□□□□ 0.61
SBF1-206ENST00000473724 BRD4O60885 1362 aaPredicted RBP18.89■□□□□ 0.61
SBF1-206ENST00000473724 DISP2A7MBM2 1401 aa18.89■□□□□ 0.61
SBF1-206ENST00000473724 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
SBF1-206ENST00000473724 SSH2Q76I76 1423 aa18.88■□□□□ 0.61
SBF1-206ENST00000473724 EVA1CP58658 441 aa18.87■□□□□ 0.61
SBF1-206ENST00000473724 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
SBF1-206ENST00000473724 NLRP13Q86W25 1043 aa18.87■□□□□ 0.61
SBF1-206ENST00000473724 CABP2Q9NPB3 220 aa18.87■□□□□ 0.61
SBF1-206ENST00000473724 BARGINQ6ZT62 677 aa18.86■□□□□ 0.61
SBF1-206ENST00000473724 EN1Q05925 392 aaPredicted RBP18.85■□□□□ 0.61
SBF1-206ENST00000473724 FAM196AQ6ZSG2 479 aa18.85■□□□□ 0.61
SBF1-206ENST00000473724 L3MBTL2Q969R5 705 aa18.85■□□□□ 0.61
SBF1-206ENST00000473724 GCP02774 474 aa18.84■□□□□ 0.61
SBF1-206ENST00000473724 LARP1Q6PKG0 1096 aaKnown RBP18.83■□□□□ 0.6
SBF1-206ENST00000473724 USP35Q9P2H5 1018 aa18.83■□□□□ 0.6
SBF1-206ENST00000473724 USP6P35125 1406 aa18.83■□□□□ 0.6
SBF1-206ENST00000473724 PSDA5PKW4 1024 aaPredicted RBP18.82■□□□□ 0.6
SBF1-206ENST00000473724 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
SBF1-206ENST00000473724 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
SBF1-206ENST00000473724 EVC2Q86UK5 1308 aa18.81■□□□□ 0.6
SBF1-206ENST00000473724 SLIT3O75094 1523 aa18.81■□□□□ 0.6
SBF1-206ENST00000473724 PARP4Q9UKK3 1724 aaKnown RBP18.81■□□□□ 0.6
SBF1-206ENST00000473724 THRAP3Q9Y2W1 955 aaKnown RBP18.81■□□□□ 0.6
SBF1-206ENST00000473724 COL5A2P05997 1499 aaPredicted RBP18.81■□□□□ 0.6
SBF1-206ENST00000473724 PIK3C2AO00443 1686 aa18.8■□□□□ 0.6
SBF1-206ENST00000473724 TRIM37O94972 964 aa18.8■□□□□ 0.6
SBF1-206ENST00000473724 PDE3BQ13370 1112 aa18.8■□□□□ 0.6
SBF1-206ENST00000473724 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
SBF1-206ENST00000473724 CAMKK2Q96RR4 588 aa18.79■□□□□ 0.6
SBF1-206ENST00000473724 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
SBF1-206ENST00000473724 PARD3Q8TEW0 1356 aa18.79■□□□□ 0.6
SBF1-206ENST00000473724 COL18A1P39060 1754 aa18.78■□□□□ 0.6
SBF1-206ENST00000473724 NLRP6P59044 892 aa18.78■□□□□ 0.6
SBF1-206ENST00000473724 EZH2Q15910 746 aaKnown RBP18.78■□□□□ 0.6
SBF1-206ENST00000473724 RREB1Q92766 1687 aa18.78■□□□□ 0.6
SBF1-206ENST00000473724 ROCK2O75116 1388 aaKnown RBP18.77■□□□□ 0.6
SBF1-206ENST00000473724 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
SBF1-206ENST00000473724 CRB1P82279 1406 aa18.76■□□□□ 0.59
SBF1-206ENST00000473724 APBA3O96018 575 aa18.76■□□□□ 0.59
SBF1-206ENST00000473724 R3HDM1Q15032 1099 aaKnown RBP18.75■□□□□ 0.59
SBF1-206ENST00000473724 RGPD5Q99666 1765 aa18.75■□□□□ 0.59
SBF1-206ENST00000473724 NUP188Q5SRE5 1749 aa18.74■□□□□ 0.59
SBF1-206ENST00000473724 SBF2Q86WG5 1849 aa18.74■□□□□ 0.59
SBF1-206ENST00000473724 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
SBF1-206ENST00000473724 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
SBF1-206ENST00000473724 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
SBF1-206ENST00000473724 C11orf95C9JLR9 678 aaPredicted RBP18.73■□□□□ 0.59
SBF1-206ENST00000473724 PEAK1Q9H792 1746 aa18.73■□□□□ 0.59
SBF1-206ENST00000473724 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
SBF1-206ENST00000473724 TTC21BQ7Z4L5 1316 aa18.72■□□□□ 0.59
SBF1-206ENST00000473724 LRRC37A3O60309 1634 aa18.71■□□□□ 0.59
SBF1-206ENST00000473724 TTC21AQ8NDW8 1320 aa18.71■□□□□ 0.59
SBF1-206ENST00000473724 CPSF1Q10570 1443 aaKnown RBP18.7■□□□□ 0.58
SBF1-206ENST00000473724 MON2Q7Z3U7 1717 aa18.7■□□□□ 0.58
SBF1-206ENST00000473724 KCNH5Q8NCM2 988 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms