RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 KIF20BQ96Q89 1820 aa19.94■□□□□ 0.78
LMNA-213ENST00000473598 C1orf167Q5SNV9 1468 aa19.94■□□□□ 0.78
LMNA-213ENST00000473598 MRS2Q9HD23 443 aa19.93■□□□□ 0.78
LMNA-213ENST00000473598 ROBO1Q9Y6N7 1651 aa19.93■□□□□ 0.78
LMNA-213ENST00000473598 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
LMNA-213ENST00000473598 ILDR1Q86SU0 546 aaPredicted RBP19.92■□□□□ 0.78
LMNA-213ENST00000473598 ORAI2Q96SN7 254 aa19.92■□□□□ 0.78
LMNA-213ENST00000473598 BRD4O60885 1362 aaPredicted RBP19.92■□□□□ 0.78
LMNA-213ENST00000473598 NSD2O96028 1365 aa19.92■□□□□ 0.78
LMNA-213ENST00000473598 PLEKHG3A1L390 1219 aa19.92■□□□□ 0.78
LMNA-213ENST00000473598 BRINP3Q76B58 766 aa19.91■□□□□ 0.78
LMNA-213ENST00000473598 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
LMNA-213ENST00000473598 ZNF692Q9BU19 519 aaPredicted RBP19.9■□□□□ 0.78
LMNA-213ENST00000473598 EDC4Q6P2E9 1401 aaKnown RBP19.89■□□□□ 0.77
LMNA-213ENST00000473598 DDX17Q92841 729 aaKnown RBP19.88■□□□□ 0.77
LMNA-213ENST00000473598 NRKQ7Z2Y5 1582 aa19.88■□□□□ 0.77
LMNA-213ENST00000473598 ESCO1Q5FWF5 840 aa19.88■□□□□ 0.77
LMNA-213ENST00000473598 ACEP12821 1306 aa19.87■□□□□ 0.77
LMNA-213ENST00000473598 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
LMNA-213ENST00000473598 FYB1O15117 783 aa19.86■□□□□ 0.77
LMNA-213ENST00000473598 MORC1Q86VD1 984 aa19.86■□□□□ 0.77
LMNA-213ENST00000473598 POLR3AO14802 1390 aaPredicted RBP19.86■□□□□ 0.77
LMNA-213ENST00000473598 HSPA1LP34931 641 aa19.85■□□□□ 0.77
LMNA-213ENST00000473598 PMFBP1Q8TBY8 1022 aa19.84■□□□□ 0.77
LMNA-213ENST00000473598 USP6P35125 1406 aa19.84■□□□□ 0.77
LMNA-213ENST00000473598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.83■□□□□ 0.77
LMNA-213ENST00000473598 GGNBP2Q9H3C7 697 aa19.83■□□□□ 0.76
LMNA-213ENST00000473598 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
LMNA-213ENST00000473598 FOXO3O43524 673 aa19.81■□□□□ 0.76
LMNA-213ENST00000473598 FAM9BQ8IZU0 186 aa19.81■□□□□ 0.76
LMNA-213ENST00000473598 NGDNQ8NEJ9 315 aaKnown RBP19.81■□□□□ 0.76
LMNA-213ENST00000473598 PNISRQ8TF01 805 aaKnown RBP19.81■□□□□ 0.76
LMNA-213ENST00000473598 XPCQ01831 940 aaPredicted RBP19.8■□□□□ 0.76
LMNA-213ENST00000473598 SSH2Q76I76 1423 aa19.8■□□□□ 0.76
LMNA-213ENST00000473598 PHF8Q9UPP1 1060 aa19.8■□□□□ 0.76
LMNA-213ENST00000473598 NHSL1Q5SYE7 1610 aa19.79■□□□□ 0.76
LMNA-213ENST00000473598 PHLPP1O60346 1717 aa19.79■□□□□ 0.76
LMNA-213ENST00000473598 TTC21BQ7Z4L5 1316 aa19.79■□□□□ 0.76
LMNA-213ENST00000473598 AHDC1Q5TGY3 1603 aaPredicted RBP19.78■□□□□ 0.76
LMNA-213ENST00000473598 TNNT2P45379 298 aaPredicted RBP19.78■□□□□ 0.76
LMNA-213ENST00000473598 NME9Q86XW9 330 aa19.77■□□□□ 0.76
LMNA-213ENST00000473598 KIF1AQ12756 1690 aa19.77■□□□□ 0.75
LMNA-213ENST00000473598 COL16A1Q07092 1604 aaPredicted RBP19.76■□□□□ 0.75
LMNA-213ENST00000473598 TTC21AQ8NDW8 1320 aa19.75■□□□□ 0.75
LMNA-213ENST00000473598 MAP2P11137 1827 aaKnown RBP19.75■□□□□ 0.75
LMNA-213ENST00000473598 NPHP3Q7Z494 1330 aa19.74■□□□□ 0.75
LMNA-213ENST00000473598 ERICH6BQ5W0A0 696 aa19.74■□□□□ 0.75
LMNA-213ENST00000473598 PIK3C2AO00443 1686 aa19.73■□□□□ 0.75
LMNA-213ENST00000473598 PXDNQ92626 1479 aa19.73■□□□□ 0.75
LMNA-213ENST00000473598 COG3Q96JB2 828 aa19.73■□□□□ 0.75
LMNA-213ENST00000473598 ZRANB1Q9UGI0 708 aa19.73■□□□□ 0.75
LMNA-213ENST00000473598 SOS2Q07890 1332 aaPredicted RBP19.72■□□□□ 0.75
LMNA-213ENST00000473598 MTHFSP49914 203 aa19.71■□□□□ 0.75
LMNA-213ENST00000473598 OVOS2A0A0J9YW53 1432 aa19.71■□□□□ 0.75
LMNA-213ENST00000473598 OVOS2Q6IE36 1432 aa19.71■□□□□ 0.75
LMNA-213ENST00000473598 USP54Q70EL1 1684 aa19.71■□□□□ 0.75
LMNA-213ENST00000473598 KRT28Q7Z3Y7 464 aa19.71■□□□□ 0.75
LMNA-213ENST00000473598 PSME1Q06323 249 aa19.7■□□□□ 0.74
LMNA-213ENST00000473598 FANCIQ9NVI1 1328 aa19.7■□□□□ 0.74
LMNA-213ENST00000473598 SHPRHQ149N8 1683 aa19.69■□□□□ 0.74
LMNA-213ENST00000473598 MARF1Q9Y4F3 1742 aaKnown RBP19.69■□□□□ 0.74
LMNA-213ENST00000473598 HNRNPUQ00839 825 aaKnown RBP eCLIP19.68■□□□□ 0.74
LMNA-213ENST00000473598 AATKQ6ZMQ8 1374 aa19.68■□□□□ 0.74
LMNA-213ENST00000473598 USP31Q70CQ4 1352 aa19.68■□□□□ 0.74
LMNA-213ENST00000473598 ANO8Q9HCE9 1232 aaPredicted RBP19.68■□□□□ 0.74
LMNA-213ENST00000473598 TRPM3Q9HCF6 1732 aaPredicted RBP19.67■□□□□ 0.74
LMNA-213ENST00000473598 INSRP06213 1382 aa19.67■□□□□ 0.74
LMNA-213ENST00000473598 MSH5O43196 834 aa19.66■□□□□ 0.74
LMNA-213ENST00000473598 LRRC59Q96AG4 307 aaKnown RBP19.66■□□□□ 0.74
LMNA-213ENST00000473598 CFAP53Q96M91 514 aa19.66■□□□□ 0.74
LMNA-213ENST00000473598 WDR43Q15061 677 aaKnown RBP eCLIP19.66■□□□□ 0.74
LMNA-213ENST00000473598 PAK3O75914 559 aaPredicted RBP19.65■□□□□ 0.74
LMNA-213ENST00000473598 FBLN1P23142 703 aa19.64■□□□□ 0.74
LMNA-213ENST00000473598 POLKQ9UBT6 870 aa19.64■□□□□ 0.74
LMNA-213ENST00000473598 SMG6Q86US8 1419 aaKnown RBP19.64■□□□□ 0.74
LMNA-213ENST00000473598 ABTB2Q8N961 1025 aa19.64■□□□□ 0.73
LMNA-213ENST00000473598 UBE2Q2Q8WVN8 375 aa19.64■□□□□ 0.73
LMNA-213ENST00000473598 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
LMNA-213ENST00000473598 COL3A1P02461 1466 aaPredicted RBP19.64■□□□□ 0.73
LMNA-213ENST00000473598 JCADQ9P266 1359 aa19.63■□□□□ 0.73
LMNA-213ENST00000473598 BLMP54132 1417 aaPredicted RBP19.63■□□□□ 0.73
LMNA-213ENST00000473598 PLEKHG5O94827 1062 aa19.63■□□□□ 0.73
LMNA-213ENST00000473598 LMOD2Q6P5Q4 547 aa19.63■□□□□ 0.73
LMNA-213ENST00000473598 SPATA31A3Q5VYP0 1347 aa19.63■□□□□ 0.73
LMNA-213ENST00000473598 PNPLA6Q8IY17 1366 aa19.63■□□□□ 0.73
LMNA-213ENST00000473598 NLRP6P59044 892 aa19.62■□□□□ 0.73
LMNA-213ENST00000473598 TNS3Q68CZ2 1445 aa19.62■□□□□ 0.73
LMNA-213ENST00000473598 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
LMNA-213ENST00000473598 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
LMNA-213ENST00000473598 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
LMNA-213ENST00000473598 ALS2Q96Q42 1657 aa19.6■□□□□ 0.73
LMNA-213ENST00000473598 DEKP35659 375 aaKnown RBP19.59■□□□□ 0.73
LMNA-213ENST00000473598 RRS1Q15050 365 aaKnown RBP19.59■□□□□ 0.73
LMNA-213ENST00000473598 NUTM2GQ5VZR2 741 aa19.59■□□□□ 0.73
LMNA-213ENST00000473598 ZBED9Q6R2W3 1325 aa19.58■□□□□ 0.73
LMNA-213ENST00000473598 PPM1GO15355 546 aaPredicted RBP19.58■□□□□ 0.72
LMNA-213ENST00000473598 PEAK1Q9H792 1746 aa19.57■□□□□ 0.72
LMNA-213ENST00000473598 NUTM2BA6NNL0 878 aaPredicted RBP19.57■□□□□ 0.72
LMNA-213ENST00000473598 NUTM2EB1AL46 878 aaPredicted RBP19.57■□□□□ 0.72
LMNA-213ENST00000473598 NUTM2AQ8IVF1 878 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms