RNA–Protein interactions for RNA: ENST00000473578.5

CAMTA1-208, Transcript of calmodulin binding transcription activator 1, human

TSL 1 (best) BASIC

Gene CAMTA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA1-208	ENST00000473578	PIAS4	Q8N2W9	510 aa	Predicted RBP	31.66	■■■□□ 2.66
CAMTA1-208	ENST00000473578	POLR3A	O14802	1390 aa	Predicted RBP	31.66	■■■□□ 2.66
CAMTA1-208	ENST00000473578	FAM83G	A6ND36	823 aa		31.65	■■■□□ 2.66
CAMTA1-208	ENST00000473578	ALS2	Q96Q42	1657 aa		31.64	■■■□□ 2.66
CAMTA1-208	ENST00000473578	QRICH2	Q9H0J4	1663 aa		31.64	■■■□□ 2.65
CAMTA1-208	ENST00000473578	PPIP5K1	Q6PFW1	1433 aa		31.62	■■■□□ 2.65
CAMTA1-208	ENST00000473578	EVC2	Q86UK5	1308 aa		31.62	■■■□□ 2.65
CAMTA1-208	ENST00000473578	ABCA3	Q99758	1704 aa		31.62	■■■□□ 2.65
CAMTA1-208	ENST00000473578	CCDC9	Q9Y3X0	531 aa	Known RBP	31.62	■■■□□ 2.65
CAMTA1-208	ENST00000473578	TOPAZ1	Q8N9V7	1692 aa		31.6	■■■□□ 2.65
CAMTA1-208	ENST00000473578	NUTM2G	Q5VZR2	741 aa		31.6	■■■□□ 2.65
CAMTA1-208	ENST00000473578	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.6	■■■□□ 2.65
CAMTA1-208	ENST00000473578	VPS72	Q15906	364 aa		31.59	■■■□□ 2.65
CAMTA1-208	ENST00000473578	RALGAPB	Q86X10	1494 aa		31.59	■■■□□ 2.65
CAMTA1-208	ENST00000473578	CARD11	Q9BXL7	1154 aa		31.58	■■■□□ 2.65
CAMTA1-208	ENST00000473578	ATAD2	Q6PL18	1390 aa		31.57	■■■□□ 2.64
CAMTA1-208	ENST00000473578	BTG4	Q9NY30	223 aa		31.57	■■■□□ 2.64
CAMTA1-208	ENST00000473578	CABP1	Q9NZU7	370 aa		31.57	■■■□□ 2.64
CAMTA1-208	ENST00000473578	ABTB2	Q8N961	1025 aa		31.56	■■■□□ 2.64
CAMTA1-208	ENST00000473578	PRDM11	Q9NQV5	511 aa		31.55	■■■□□ 2.64
CAMTA1-208	ENST00000473578	PLCH1	Q4KWH8	1693 aa		31.54	■■■□□ 2.64
CAMTA1-208	ENST00000473578	NWD2	Q9ULI1	1742 aa		31.52	■■■□□ 2.64
CAMTA1-208	ENST00000473578	GLI3	P10071	1580 aa		31.51	■■■□□ 2.64
CAMTA1-208	ENST00000473578	ZC3H6	P61129	1189 aa	Known RBP	31.5	■■■□□ 2.63
CAMTA1-208	ENST00000473578	KIAA0232	Q92628	1395 aa		31.48	■■■□□ 2.63
CAMTA1-208	ENST00000473578	COL14A1	Q05707	1796 aa	Known RBP	31.48	■■■□□ 2.63
CAMTA1-208	ENST00000473578	NLRP13	Q86W25	1043 aa		31.47	■■■□□ 2.63
CAMTA1-208	ENST00000473578	SEPT12	Q8IYM1	358 aa		31.47	■■■□□ 2.63
CAMTA1-208	ENST00000473578	CRYBG1	Q9Y4K1	1723 aa		31.46	■■■□□ 2.63
CAMTA1-208	ENST00000473578	BRD4	O60885	1362 aa	Predicted RBP	31.46	■■■□□ 2.63
CAMTA1-208	ENST00000473578	CHRNA2	Q15822	529 aa		31.46	■■■□□ 2.63
CAMTA1-208	ENST00000473578		A0A0G2JS52	829 aa		31.45	■■■□□ 2.63
CAMTA1-208	ENST00000473578	MYT1	Q01538	1121 aa		31.45	■■■□□ 2.63
CAMTA1-208	ENST00000473578	USP6	P35125	1406 aa		31.43	■■■□□ 2.62
CAMTA1-208	ENST00000473578	ONECUT3	O60422	494 aa	Predicted RBP	31.42	■■■□□ 2.62
CAMTA1-208	ENST00000473578	PHRF1	Q9P1Y6	1649 aa	Known RBP	31.41	■■■□□ 2.62
CAMTA1-208	ENST00000473578	SBNO2	Q9Y2G9	1366 aa		31.41	■■■□□ 2.62
CAMTA1-208	ENST00000473578	NLRP6	P59044	892 aa		31.4	■■■□□ 2.62
CAMTA1-208	ENST00000473578	FAM98C	Q17RN3	349 aa	Known RBP	31.4	■■■□□ 2.62
CAMTA1-208	ENST00000473578	ZNF692	Q9BU19	519 aa	Predicted RBP	31.4	■■■□□ 2.62
CAMTA1-208	ENST00000473578	USP19	O94966	1318 aa		31.4	■■■□□ 2.62
CAMTA1-208	ENST00000473578	NRAP	Q86VF7	1730 aa		31.4	■■■□□ 2.62
CAMTA1-208	ENST00000473578	GC	P02774	474 aa		31.39	■■■□□ 2.62
CAMTA1-208	ENST00000473578	STRN4	Q9NRL3	753 aa		31.39	■■■□□ 2.62
CAMTA1-208	ENST00000473578	SPATA31A5	Q5VU36	1347 aa		31.37	■■■□□ 2.61
CAMTA1-208	ENST00000473578	SPATA31A7	Q8IWB4	1347 aa		31.37	■■■□□ 2.61
CAMTA1-208	ENST00000473578	EVA1C	P58658	441 aa		31.36	■■■□□ 2.61
CAMTA1-208	ENST00000473578	KRT27	Q7Z3Y8	459 aa		31.36	■■■□□ 2.61
CAMTA1-208	ENST00000473578	CCDC125	Q86Z20	511 aa		31.36	■■■□□ 2.61
CAMTA1-208	ENST00000473578	PCGF6	Q9BYE7	350 aa		31.36	■■■□□ 2.61
CAMTA1-208	ENST00000473578	NRK	Q7Z2Y5	1582 aa		31.34	■■■□□ 2.61
CAMTA1-208	ENST00000473578	SSH2	Q76I76	1423 aa		31.33	■■■□□ 2.61
CAMTA1-208	ENST00000473578	CPD	O75976	1380 aa		31.33	■■■□□ 2.61
CAMTA1-208	ENST00000473578	TTC21B	Q7Z4L5	1316 aa		31.32	■■■□□ 2.6
CAMTA1-208	ENST00000473578	ZBTB7C	A1YPR0	619 aa		31.32	■■■□□ 2.6
CAMTA1-208	ENST00000473578	TMC1	Q8TDI8	760 aa		31.31	■■■□□ 2.6
CAMTA1-208	ENST00000473578	KTN1	Q86UP2	1357 aa	Known RBP	31.3	■■■□□ 2.6
CAMTA1-208	ENST00000473578	EP400	Q96L91	3159 aa		31.29	■■■□□ 2.6
CAMTA1-208	ENST00000473578	SPATA31A1	Q5TZJ5	1347 aa		31.29	■■■□□ 2.6
CAMTA1-208	ENST00000473578	BRWD3	Q6RI45	1802 aa		31.28	■■■□□ 2.6
CAMTA1-208	ENST00000473578	CPSF1	Q10570	1443 aa	Known RBP	31.28	■■■□□ 2.6
CAMTA1-208	ENST00000473578	USP35	Q9P2H5	1018 aa		31.28	■■■□□ 2.6
CAMTA1-208	ENST00000473578	TTC21A	Q8NDW8	1320 aa		31.27	■■■□□ 2.6
CAMTA1-208	ENST00000473578	ST20-MTHFS	A0A0A6YYL1	179 aa		31.27	■■■□□ 2.6
CAMTA1-208	ENST00000473578	CAMTA1	Q9Y6Y1	1673 aa		31.25	■■■□□ 2.59
CAMTA1-208	ENST00000473578	BLM	P54132	1417 aa	Predicted RBP	31.24	■■■□□ 2.59
CAMTA1-208	ENST00000473578	SF3B2	Q13435	895 aa	Known RBP	31.24	■■■□□ 2.59
CAMTA1-208	ENST00000473578	LARP1	Q6PKG0	1096 aa	Known RBP	31.24	■■■□□ 2.59
CAMTA1-208	ENST00000473578	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.24	■■■□□ 2.59
CAMTA1-208	ENST00000473578	SLC12A5	Q9H2X9	1139 aa		31.23	■■■□□ 2.59
CAMTA1-208	ENST00000473578	PIK3C2A	O00443	1686 aa		31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	SOX12	O15370	315 aa		31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	SLC24A1	O60721	1099 aa		31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.22	■■■□□ 2.59	1e-6	■■□□□ 13.9
CAMTA1-208	ENST00000473578	KCNH5	Q8NCM2	988 aa		31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	PUS7	Q96PZ0	661 aa	Known RBP	31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	TESK2	Q96S53	571 aa		31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	SLIT3	O75094	1523 aa		31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	AKAP12	Q02952	1782 aa		31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	CLSPN	Q9HAW4	1339 aa		31.22	■■■□□ 2.59
CAMTA1-208	ENST00000473578	TIMELESS	Q9UNS1	1208 aa		31.2	■■■□□ 2.59
CAMTA1-208	ENST00000473578	TERF2IP	Q9NYB0	399 aa		31.19	■■■□□ 2.58
CAMTA1-208	ENST00000473578	LMO7	Q8WWI1	1683 aa		31.19	■■■□□ 2.58
CAMTA1-208	ENST00000473578	AATK	Q6ZMQ8	1374 aa		31.18	■■■□□ 2.58
CAMTA1-208	ENST00000473578	FAM182B	Q5T319	152 aa		31.17	■■■□□ 2.58
CAMTA1-208	ENST00000473578	TCP11L2	Q8N4U5	519 aa		31.17	■■■□□ 2.58
CAMTA1-208	ENST00000473578	BARGIN	Q6ZT62	677 aa		31.16	■■■□□ 2.58
CAMTA1-208	ENST00000473578	COL5A2	P05997	1499 aa	Predicted RBP	31.15	■■■□□ 2.58
CAMTA1-208	ENST00000473578	CD163L1	Q9NR16	1453 aa		31.15	■■■□□ 2.58
CAMTA1-208	ENST00000473578	THSD7A	Q9UPZ6	1657 aa		31.15	■■■□□ 2.58
CAMTA1-208	ENST00000473578	USP47	Q96K76	1375 aa		31.15	■■■□□ 2.58
CAMTA1-208	ENST00000473578	DEFB132	Q7Z7B7	95 aa		31.14	■■■□□ 2.58
CAMTA1-208	ENST00000473578	ARHGEF25	Q86VW2	580 aa		31.14	■■■□□ 2.58
CAMTA1-208	ENST00000473578	ZRANB1	Q9UGI0	708 aa		31.14	■■■□□ 2.58
CAMTA1-208	ENST00000473578	NME9	Q86XW9	330 aa		31.13	■■■□□ 2.57
CAMTA1-208	ENST00000473578	THRAP3	Q9Y2W1	955 aa	Known RBP	31.13	■■■□□ 2.57
CAMTA1-208	ENST00000473578	MON2	Q7Z3U7	1717 aa		31.12	■■■□□ 2.57
CAMTA1-208	ENST00000473578		A0A1W2PP64	1363 aa		31.11	■■■□□ 2.57
CAMTA1-208	ENST00000473578	PDE3B	Q13370	1112 aa		31.11	■■■□□ 2.57
CAMTA1-208	ENST00000473578	CRB1	P82279	1406 aa		31.1	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms