RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 PRR36Q9H6K5 1346 aa28.23■■■□□ 2.11
APTX-218ENST00000473270 ABCA3Q99758 1704 aa28.23■■■□□ 2.11
APTX-218ENST00000473270 BAG6P46379 1132 aa28.22■■■□□ 2.11
APTX-218ENST00000473270 NUDT16Q96DE0 195 aaKnown RBP28.22■■■□□ 2.11
APTX-218ENST00000473270 DEFB132Q7Z7B7 95 aa28.21■■■□□ 2.11
APTX-218ENST00000473270 COL14A1Q05707 1796 aaKnown RBP28.19■■■□□ 2.1
APTX-218ENST00000473270 BRWD3Q6RI45 1802 aa28.19■■■□□ 2.1
APTX-218ENST00000473270 TRPM3Q9HCF6 1732 aaPredicted RBP28.18■■■□□ 2.1
APTX-218ENST00000473270 SRCAPQ6ZRS2 3230 aa28.18■■■□□ 2.1
APTX-218ENST00000473270 CDK19Q9BWU1 502 aa28.17■■■□□ 2.1
APTX-218ENST00000473270 ITSN1Q15811 1721 aa28.16■■■□□ 2.1
APTX-218ENST00000473270 ALS2Q96Q42 1657 aa28.16■■■□□ 2.1
APTX-218ENST00000473270 CCDC61Q9Y6R9 512 aa28.13■■■□□ 2.09
APTX-218ENST00000473270 SPATA31A5Q5VU36 1347 aa28.13■■■□□ 2.09
APTX-218ENST00000473270 SPATA31A7Q8IWB4 1347 aa28.13■■■□□ 2.09
APTX-218ENST00000473270 EVA1CP58658 441 aa28.12■■■□□ 2.09
APTX-218ENST00000473270 ATP7BP35670 1465 aa28.11■■■□□ 2.09
APTX-218ENST00000473270 STRN4Q9NRL3 753 aa28.11■■■□□ 2.09
APTX-218ENST00000473270 ARHGEF28Q8N1W1 1705 aaKnown RBP28.11■■■□□ 2.09
APTX-218ENST00000473270 ZC3H6P61129 1189 aaKnown RBP28.09■■■□□ 2.09
APTX-218ENST00000473270 SRPK2P78362 688 aaKnown RBP28.09■■■□□ 2.09
APTX-218ENST00000473270 NUTM2GQ5VZR2 741 aa28.09■■■□□ 2.09
APTX-218ENST00000473270 ACEP12821 1306 aa28.09■■■□□ 2.09
APTX-218ENST00000473270 KIAA0232Q92628 1395 aa28.09■■■□□ 2.09
APTX-218ENST00000473270 NRAPQ86VF7 1730 aa28.09■■■□□ 2.09
APTX-218ENST00000473270 NBPF8Q3BBV2 869 aa28.08■■■□□ 2.09
APTX-218ENST00000473270 ABTB2Q8N961 1025 aa28.08■■■□□ 2.09
APTX-218ENST00000473270 CHRNA2Q15822 529 aa28.07■■■□□ 2.08
APTX-218ENST00000473270 POLR3AO14802 1390 aaPredicted RBP28.03■■■□□ 2.08
APTX-218ENST00000473270 SPATA31A1Q5TZJ5 1347 aa28.03■■■□□ 2.08
APTX-218ENST00000473270 PLEKHG3A1L390 1219 aa28.03■■■□□ 2.08
APTX-218ENST00000473270 USP35Q9P2H5 1018 aa28.03■■■□□ 2.08
APTX-218ENST00000473270 CENPJQ9HC77 1338 aaPredicted RBP28.02■■■□□ 2.08
APTX-218ENST00000473270 FAM182BQ5T319 152 aa28.02■■■□□ 2.08
APTX-218ENST00000473270 FAM196AQ6ZSG2 479 aa28.02■■■□□ 2.08
APTX-218ENST00000473270 KIAA1210Q9ULL0 1709 aa28.01■■■□□ 2.07
APTX-218ENST00000473270 EN1Q05925 392 aaPredicted RBP28.01■■■□□ 2.07
APTX-218ENST00000473270 PDE3BQ13370 1112 aa28.01■■■□□ 2.07
APTX-218ENST00000473270 NLRP13Q86W25 1043 aa28.01■■■□□ 2.07
APTX-218ENST00000473270 NBPF1Q3BBV0 1214 aa27.99■■■□□ 2.07
APTX-218ENST00000473270 PSDA5PKW4 1024 aaPredicted RBP27.98■■■□□ 2.07
APTX-218ENST00000473270 RGPD1P0DJD0 1748 aa27.98■■■□□ 2.07
APTX-218ENST00000473270 CRYBG1Q9Y4K1 1723 aa27.98■■■□□ 2.07
APTX-218ENST00000473270 PPIP5K1Q6PFW1 1433 aa27.96■■■□□ 2.07
APTX-218ENST00000473270 PHRF1Q9P1Y6 1649 aaKnown RBP27.96■■■□□ 2.07
APTX-218ENST00000473270 CABP2Q9NPB3 220 aa27.94■■■□□ 2.06
APTX-218ENST00000473270 BRD4O60885 1362 aaPredicted RBP27.94■■■□□ 2.06
APTX-218ENST00000473270 TRIM37O94972 964 aa27.93■■■□□ 2.06
APTX-218ENST00000473270 BARGINQ6ZT62 677 aa27.93■■■□□ 2.06
APTX-218ENST00000473270 TOPAZ1Q8N9V7 1692 aa27.93■■■□□ 2.06
APTX-218ENST00000473270 THSD7AQ9UPZ6 1657 aa27.93■■■□□ 2.06
APTX-218ENST00000473270 SSH2Q76I76 1423 aa27.92■■■□□ 2.06
APTX-218ENST00000473270 ZBTB7CA1YPR0 619 aa27.92■■■□□ 2.06
APTX-218ENST00000473270 TCP11L2Q8N4U5 519 aa27.92■■■□□ 2.06
APTX-218ENST00000473270 APBA3O96018 575 aa27.91■■■□□ 2.06
APTX-218ENST00000473270 GCP02774 474 aa27.91■■■□□ 2.06
APTX-218ENST00000473270 THRAP3Q9Y2W1 955 aaKnown RBP27.91■■■□□ 2.06
APTX-218ENST00000473270 CPDO75976 1380 aa27.9■■■□□ 2.06
APTX-218ENST00000473270 NLRP6P59044 892 aa27.89■■■□□ 2.06
APTX-218ENST00000473270 R3HDM1Q15032 1099 aaKnown RBP27.89■■■□□ 2.06
APTX-218ENST00000473270 LARP1Q6PKG0 1096 aaKnown RBP27.89■■■□□ 2.06
APTX-218ENST00000473270 USP19O94966 1318 aa27.89■■■□□ 2.05
APTX-218ENST00000473270 EVC2Q86UK5 1308 aa27.89■■■□□ 2.05
APTX-218ENST00000473270 DISP2A7MBM2 1401 aa27.88■■■□□ 2.05
APTX-218ENST00000473270 C11orf95C9JLR9 678 aaPredicted RBP27.88■■■□□ 2.05
APTX-218ENST00000473270 CABP1Q9NZU7 370 aa27.88■■■□□ 2.05
APTX-218ENST00000473270 EZH2Q15910 746 aaKnown RBP27.87■■■□□ 2.05
APTX-218ENST00000473270 LRP5O75197 1615 aa27.86■■■□□ 2.05
APTX-218ENST00000473270 NRKQ7Z2Y5 1582 aa27.86■■■□□ 2.05
APTX-218ENST00000473270 PARD3Q8TEW0 1356 aa27.86■■■□□ 2.05
APTX-218ENST00000473270 NBPF14Q5TI25 921 aa27.84■■■□□ 2.05
APTX-218ENST00000473270 L3MBTL2Q969R5 705 aa27.84■■■□□ 2.05
APTX-218ENST00000473270 CAMTA1Q9Y6Y1 1673 aa27.82■■■□□ 2.04
APTX-218ENST00000473270 QRICH2Q9H0J4 1663 aa27.81■■■□□ 2.04
APTX-218ENST00000473270 CAMKK2Q96RR4 588 aa27.81■■■□□ 2.04
APTX-218ENST00000473270 NEUROD1Q13562 356 aa27.8■■■□□ 2.04
APTX-218ENST00000473270 ZNF692Q9BU19 519 aaPredicted RBP27.8■■■□□ 2.04
APTX-218ENST00000473270 USP6P35125 1406 aa27.8■■■□□ 2.04
APTX-218ENST00000473270 ROCK2O75116 1388 aaKnown RBP27.79■■■□□ 2.04
APTX-218ENST00000473270 TNS1Q9HBL0 1735 aaKnown RBP27.78■■■□□ 2.04
APTX-218ENST00000473270 CRB1P82279 1406 aa27.78■■■□□ 2.04
APTX-218ENST00000473270 TOM1L2Q6ZVM7 507 aa27.78■■■□□ 2.04
APTX-218ENST00000473270 COL5A2P05997 1499 aaPredicted RBP27.76■■■□□ 2.04
APTX-218ENST00000473270 KCNH5Q8NCM2 988 aa27.76■■■□□ 2.03
APTX-218ENST00000473270 CCER1Q8TC90 406 aaPredicted RBP27.76■■■□□ 2.03
APTX-218ENST00000473270 AATKQ6ZMQ8 1374 aa27.75■■■□□ 2.03
APTX-218ENST00000473270 LMO7Q8WWI1 1683 aa27.75■■■□□ 2.03
APTX-218ENST00000473270 DDB1Q16531 1140 aa27.74■■■□□ 2.03
APTX-218ENST00000473270 CSB-PGBD3P0DP91 1061 aa27.72■■■□□ 2.03
APTX-218ENST00000473270 SIN3AQ96ST3 1273 aa27.72■■■□□ 2.03
APTX-218ENST00000473270 CLSPNQ9HAW4 1339 aa27.71■■■□□ 2.03
APTX-218ENST00000473270 CDCA7Q9BWT1 371 aaPredicted RBP27.71■■■□□ 2.03
APTX-218ENST00000473270 OVOS2A0A0G2JMS6 1433 aa27.7■■■□□ 2.03
APTX-218ENST00000473270 OVOS2A0A0J9YW53 1432 aa27.7■■■□□ 2.03
APTX-218ENST00000473270 OVOS2Q6IE36 1432 aa27.7■■■□□ 2.03
APTX-218ENST00000473270 TTC21AQ8NDW8 1320 aa27.69■■■□□ 2.02
APTX-218ENST00000473270 SOX12O15370 315 aa27.69■■■□□ 2.02
APTX-218ENST00000473270 TTC21BQ7Z4L5 1316 aa27.67■■■□□ 2.02
APTX-218ENST00000473270 TRPM1Q7Z4N2 1603 aa27.67■■■□□ 2.02
APTX-218ENST00000473270 SLIT3O75094 1523 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms