RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.57■□□□□ 0.56
TPM3-216ENST00000473036 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
TPM3-216ENST00000473036 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
TPM3-216ENST00000473036 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
TPM3-216ENST00000473036 PPIP5K1Q6PFW1 1433 aa18.55■□□□□ 0.56
TPM3-216ENST00000473036 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
TPM3-216ENST00000473036 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
TPM3-216ENST00000473036 ACEP12821 1306 aa18.53■□□□□ 0.56
TPM3-216ENST00000473036 ALS2Q96Q42 1657 aa18.53■□□□□ 0.56
TPM3-216ENST00000473036 BLMP54132 1417 aaPredicted RBP18.52■□□□□ 0.56
TPM3-216ENST00000473036 PSME1Q06323 249 aa18.52■□□□□ 0.56
TPM3-216ENST00000473036 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
TPM3-216ENST00000473036 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
TPM3-216ENST00000473036 SLIT2O94813 1529 aa18.51■□□□□ 0.55
TPM3-216ENST00000473036 NGDNQ8NEJ9 315 aaKnown RBP18.51■□□□□ 0.55
TPM3-216ENST00000473036 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
TPM3-216ENST00000473036 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
TPM3-216ENST00000473036 AKAP12Q02952 1782 aa18.48■□□□□ 0.55
TPM3-216ENST00000473036 CD163L1Q9NR16 1453 aa18.48■□□□□ 0.55
TPM3-216ENST00000473036 ABCA3Q99758 1704 aa18.47■□□□□ 0.55
TPM3-216ENST00000473036 SSH2Q76I76 1423 aa18.47■□□□□ 0.55
TPM3-216ENST00000473036 CRYBG1Q9Y4K1 1723 aa18.46■□□□□ 0.55
TPM3-216ENST00000473036 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
TPM3-216ENST00000473036 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
TPM3-216ENST00000473036 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
TPM3-216ENST00000473036 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
TPM3-216ENST00000473036 GLI3P10071 1580 aa18.45■□□□□ 0.54
TPM3-216ENST00000473036 USP6P35125 1406 aa18.44■□□□□ 0.54
TPM3-216ENST00000473036 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
TPM3-216ENST00000473036 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
TPM3-216ENST00000473036 VPS72Q15906 364 aa18.43■□□□□ 0.54
TPM3-216ENST00000473036 PUS7Q96PZ0 661 aaKnown RBP18.43■□□□□ 0.54
TPM3-216ENST00000473036 MON2Q7Z3U7 1717 aa18.43■□□□□ 0.54
TPM3-216ENST00000473036 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
TPM3-216ENST00000473036 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
TPM3-216ENST00000473036 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
TPM3-216ENST00000473036 LMOD2Q6P5Q4 547 aa18.42■□□□□ 0.54
TPM3-216ENST00000473036 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
TPM3-216ENST00000473036 NWD2Q9ULI1 1742 aa18.41■□□□□ 0.54
TPM3-216ENST00000473036 EIF4G2P78344 907 aaKnown RBP eCLIP18.41■□□□□ 0.54
TPM3-216ENST00000473036 PIK3C2AO00443 1686 aa18.41■□□□□ 0.54
TPM3-216ENST00000473036 C11orf95C9JLR9 678 aaPredicted RBP18.4■□□□□ 0.54
TPM3-216ENST00000473036 TMF1P82094 1093 aa18.4■□□□□ 0.54
TPM3-216ENST00000473036 NUTM2GQ5VZR2 741 aa18.4■□□□□ 0.54
TPM3-216ENST00000473036 MYOM1P52179 1685 aa18.4■□□□□ 0.54
TPM3-216ENST00000473036 LRP5O75197 1615 aa18.39■□□□□ 0.53
TPM3-216ENST00000473036 SEPT12Q8IYM1 358 aa18.39■□□□□ 0.53
TPM3-216ENST00000473036 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
TPM3-216ENST00000473036 PHRF1Q9P1Y6 1649 aaKnown RBP18.38■□□□□ 0.53
TPM3-216ENST00000473036 HAP1P54257 671 aaPredicted RBP18.38■□□□□ 0.53
TPM3-216ENST00000473036 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
TPM3-216ENST00000473036 TTC21BQ7Z4L5 1316 aa18.37■□□□□ 0.53
TPM3-216ENST00000473036 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
TPM3-216ENST00000473036 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
TPM3-216ENST00000473036 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
TPM3-216ENST00000473036 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
TPM3-216ENST00000473036 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
TPM3-216ENST00000473036 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
TPM3-216ENST00000473036 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
TPM3-216ENST00000473036 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
TPM3-216ENST00000473036 PLCH1Q4KWH8 1693 aa18.34■□□□□ 0.53
TPM3-216ENST00000473036 USP19O94966 1318 aa18.33■□□□□ 0.53
TPM3-216ENST00000473036 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.52
TPM3-216ENST00000473036 FAM83GA6ND36 823 aa18.32■□□□□ 0.52
TPM3-216ENST00000473036 BAG6P46379 1132 aa18.32■□□□□ 0.52
TPM3-216ENST00000473036 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
TPM3-216ENST00000473036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
TPM3-216ENST00000473036 SLIT3O75094 1523 aa18.31■□□□□ 0.52
TPM3-216ENST00000473036 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
TPM3-216ENST00000473036 NME9Q86XW9 330 aa18.3■□□□□ 0.52
TPM3-216ENST00000473036 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
TPM3-216ENST00000473036 CCDC9Q9Y3X0 531 aaKnown RBP18.3■□□□□ 0.52
TPM3-216ENST00000473036 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
TPM3-216ENST00000473036 EDC4Q6P2E9 1401 aaKnown RBP18.3■□□□□ 0.52
TPM3-216ENST00000473036 NLRP6P59044 892 aa18.29■□□□□ 0.52
TPM3-216ENST00000473036 HDGFL2Q7Z4V5 671 aaPredicted RBP18.29■□□□□ 0.52
TPM3-216ENST00000473036 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
TPM3-216ENST00000473036 TTC21AQ8NDW8 1320 aa18.28■□□□□ 0.52
TPM3-216ENST00000473036 CDCA8Q53HL2 280 aa18.28■□□□□ 0.52
TPM3-216ENST00000473036 KIAA0232Q92628 1395 aa18.28■□□□□ 0.52
TPM3-216ENST00000473036 NRAPQ86VF7 1730 aa18.27■□□□□ 0.52
TPM3-216ENST00000473036 DISP2A7MBM2 1401 aa18.27■□□□□ 0.52
TPM3-216ENST00000473036 NLRP13Q86W25 1043 aa18.27■□□□□ 0.52
TPM3-216ENST00000473036 USP31Q70CQ4 1352 aa18.27■□□□□ 0.51
TPM3-216ENST00000473036 GCP02774 474 aa18.26■□□□□ 0.51
TPM3-216ENST00000473036 ZC3H6P61129 1189 aaKnown RBP18.26■□□□□ 0.51
TPM3-216ENST00000473036 COL14A1Q05707 1796 aaKnown RBP18.26■□□□□ 0.51
TPM3-216ENST00000473036 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
TPM3-216ENST00000473036 NFAT5O94916 1531 aa18.25■□□□□ 0.51
TPM3-216ENST00000473036 CHRNA2Q15822 529 aa18.25■□□□□ 0.51
TPM3-216ENST00000473036 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
TPM3-216ENST00000473036 OVOS2A0A0J9YW53 1432 aa18.24■□□□□ 0.51
TPM3-216ENST00000473036 OVOS2Q6IE36 1432 aa18.24■□□□□ 0.51
TPM3-216ENST00000473036 LMO7Q8WWI1 1683 aa18.24■□□□□ 0.51
TPM3-216ENST00000473036 COL18A1P39060 1754 aa18.24■□□□□ 0.51
TPM3-216ENST00000473036 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
TPM3-216ENST00000473036 CPDO75976 1380 aa18.23■□□□□ 0.51
TPM3-216ENST00000473036 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
TPM3-216ENST00000473036 A0A0G2JS52 829 aa18.22■□□□□ 0.51
TPM3-216ENST00000473036 MYT1Q01538 1121 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms