RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
CHEK2-223ENST00000472807 GLI3P10071 1580 aa12.86□□□□□ -0.35
CHEK2-223ENST00000472807 SRCAPQ6ZRS2 3230 aa12.85□□□□□ -0.35
CHEK2-223ENST00000472807 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
CHEK2-223ENST00000472807 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
CHEK2-223ENST00000472807 L3MBTL2Q969R5 705 aa12.84□□□□□ -0.35
CHEK2-223ENST00000472807 COL14A1Q05707 1796 aaKnown RBP12.84□□□□□ -0.35
CHEK2-223ENST00000472807 CRYBG1Q9Y4K1 1723 aa12.83□□□□□ -0.36
CHEK2-223ENST00000472807 VPS72Q15906 364 aa12.83□□□□□ -0.36
CHEK2-223ENST00000472807 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.36
CHEK2-223ENST00000472807 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
CHEK2-223ENST00000472807 POLR3AO14802 1390 aaPredicted RBP12.82□□□□□ -0.36
CHEK2-223ENST00000472807 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
CHEK2-223ENST00000472807 SIN3AQ96ST3 1273 aa12.82□□□□□ -0.36
CHEK2-223ENST00000472807 TRPM1Q7Z4N2 1603 aa12.81□□□□□ -0.36
CHEK2-223ENST00000472807 SRPK2P78362 688 aaKnown RBP12.81□□□□□ -0.36
CHEK2-223ENST00000472807 NEUROD1Q13562 356 aa12.81□□□□□ -0.36
CHEK2-223ENST00000472807 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
CHEK2-223ENST00000472807 ACEP12821 1306 aa12.81□□□□□ -0.36
CHEK2-223ENST00000472807 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
CHEK2-223ENST00000472807 PLEKHG3A1L390 1219 aa12.8□□□□□ -0.36
CHEK2-223ENST00000472807 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
CHEK2-223ENST00000472807 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
CHEK2-223ENST00000472807 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
CHEK2-223ENST00000472807 SEPT12Q8IYM1 358 aa12.79□□□□□ -0.36
CHEK2-223ENST00000472807 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
CHEK2-223ENST00000472807 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
CHEK2-223ENST00000472807 A0A0G2JS52 829 aa12.78□□□□□ -0.36
CHEK2-223ENST00000472807 MYT1Q01538 1121 aa12.78□□□□□ -0.36
CHEK2-223ENST00000472807 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
CHEK2-223ENST00000472807 CCDC125Q86Z20 511 aa12.78□□□□□ -0.36
CHEK2-223ENST00000472807 CABP2Q9NPB3 220 aa12.78□□□□□ -0.36
CHEK2-223ENST00000472807 KIAA0232Q92628 1395 aa12.77□□□□□ -0.37
CHEK2-223ENST00000472807 NUTM2GQ5VZR2 741 aa12.76□□□□□ -0.37
CHEK2-223ENST00000472807 ABTB2Q8N961 1025 aa12.76□□□□□ -0.37
CHEK2-223ENST00000472807 EVC2Q86UK5 1308 aa12.76□□□□□ -0.37
CHEK2-223ENST00000472807 NRKQ7Z2Y5 1582 aa12.76□□□□□ -0.37
CHEK2-223ENST00000472807 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
CHEK2-223ENST00000472807 BRD4O60885 1362 aaPredicted RBP12.75□□□□□ -0.37
CHEK2-223ENST00000472807 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
CHEK2-223ENST00000472807 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
CHEK2-223ENST00000472807 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
CHEK2-223ENST00000472807 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
CHEK2-223ENST00000472807 FAM98CQ17RN3 349 aaKnown RBP12.74□□□□□ -0.37
CHEK2-223ENST00000472807 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
CHEK2-223ENST00000472807 USP6P35125 1406 aa12.73□□□□□ -0.37
CHEK2-223ENST00000472807 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
CHEK2-223ENST00000472807 USP19O94966 1318 aa12.73□□□□□ -0.37
CHEK2-223ENST00000472807 ZC3H6P61129 1189 aaKnown RBP12.73□□□□□ -0.37
CHEK2-223ENST00000472807 CHRNA2Q15822 529 aa12.73□□□□□ -0.37
CHEK2-223ENST00000472807 SF3B2Q13435 895 aaKnown RBP12.72□□□□□ -0.37
CHEK2-223ENST00000472807 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
CHEK2-223ENST00000472807 STRN4Q9NRL3 753 aa12.72□□□□□ -0.37
CHEK2-223ENST00000472807 CABP1Q9NZU7 370 aa12.72□□□□□ -0.37
CHEK2-223ENST00000472807 CPDO75976 1380 aa12.71□□□□□ -0.37
CHEK2-223ENST00000472807 THSD7AQ9UPZ6 1657 aa12.71□□□□□ -0.37
CHEK2-223ENST00000472807 SPATA31A1Q5TZJ5 1347 aa12.7□□□□□ -0.38
CHEK2-223ENST00000472807 CARD11Q9BXL7 1154 aa12.7□□□□□ -0.38
CHEK2-223ENST00000472807 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
CHEK2-223ENST00000472807 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
CHEK2-223ENST00000472807 SSH2Q76I76 1423 aa12.7□□□□□ -0.38
CHEK2-223ENST00000472807 SBNO2Q9Y2G9 1366 aa12.69□□□□□ -0.38
CHEK2-223ENST00000472807 EVA1CP58658 441 aa12.69□□□□□ -0.38
CHEK2-223ENST00000472807 TRIM26Q12899 539 aaPredicted RBP12.69□□□□□ -0.38
CHEK2-223ENST00000472807 PIK3C2AO00443 1686 aa12.69□□□□□ -0.38
CHEK2-223ENST00000472807 GCP02774 474 aa12.68□□□□□ -0.38
CHEK2-223ENST00000472807 NLRP6P59044 892 aa12.68□□□□□ -0.38
CHEK2-223ENST00000472807 AKAP12Q02952 1782 aa12.68□□□□□ -0.38
CHEK2-223ENST00000472807 SLIT3O75094 1523 aa12.67□□□□□ -0.38
CHEK2-223ENST00000472807 CAMTA1Q9Y6Y1 1673 aa12.67□□□□□ -0.38
CHEK2-223ENST00000472807 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
CHEK2-223ENST00000472807 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
CHEK2-223ENST00000472807 RGPD1P0DJD0 1748 aa12.67□□□□□ -0.38
CHEK2-223ENST00000472807 DEFB132Q7Z7B7 95 aa12.66□□□□□ -0.38
CHEK2-223ENST00000472807 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
CHEK2-223ENST00000472807 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
CHEK2-223ENST00000472807 ZBTB7CA1YPR0 619 aa12.65□□□□□ -0.38
CHEK2-223ENST00000472807 BAG6P46379 1132 aa12.65□□□□□ -0.38
CHEK2-223ENST00000472807 LARP1Q6PKG0 1096 aaKnown RBP12.65□□□□□ -0.38
CHEK2-223ENST00000472807 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
CHEK2-223ENST00000472807 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.38
CHEK2-223ENST00000472807 TTC21BQ7Z4L5 1316 aa12.64□□□□□ -0.39
CHEK2-223ENST00000472807 CPSF1Q10570 1443 aaKnown RBP12.64□□□□□ -0.39
CHEK2-223ENST00000472807 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
CHEK2-223ENST00000472807 MON2Q7Z3U7 1717 aa12.64□□□□□ -0.39
CHEK2-223ENST00000472807 AATKQ6ZMQ8 1374 aa12.64□□□□□ -0.39
CHEK2-223ENST00000472807 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
CHEK2-223ENST00000472807 THRAP3Q9Y2W1 955 aaKnown RBP12.63□□□□□ -0.39
CHEK2-223ENST00000472807 CRB1P82279 1406 aa12.62□□□□□ -0.39
CHEK2-223ENST00000472807 PDE3BQ13370 1112 aa12.62□□□□□ -0.39
CHEK2-223ENST00000472807 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
CHEK2-223ENST00000472807 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
CHEK2-223ENST00000472807 TNS1Q9HBL0 1735 aaKnown RBP12.62□□□□□ -0.39
CHEK2-223ENST00000472807 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
CHEK2-223ENST00000472807 PARP4Q9UKK3 1724 aaKnown RBP12.61□□□□□ -0.39
CHEK2-223ENST00000472807 DISP2A7MBM2 1401 aa12.61□□□□□ -0.39
CHEK2-223ENST00000472807 SOX12O15370 315 aa12.6□□□□□ -0.39
CHEK2-223ENST00000472807 HDGFL2Q7Z4V5 671 aaPredicted RBP12.6□□□□□ -0.39
CHEK2-223ENST00000472807 NFAT5O94916 1531 aa12.6□□□□□ -0.39
CHEK2-223ENST00000472807 COL18A1P39060 1754 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms