RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, humanhuman

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18B-208ENST00000472267 STRCP1A6NGW2 1772 aa14.37□□□□□ -0.11
MRPS18B-208ENST00000472267 USP6P35125 1406 aa14.37□□□□□ -0.11
MRPS18B-208ENST00000472267 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
MRPS18B-208ENST00000472267 COG3Q96JB2 828 aa14.36□□□□□ -0.11
MRPS18B-208ENST00000472267 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
MRPS18B-208ENST00000472267 NRKQ7Z2Y5 1582 aa14.35□□□□□ -0.11
MRPS18B-208ENST00000472267 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
MRPS18B-208ENST00000472267 FBLN1P23142 703 aa14.34□□□□□ -0.11
MRPS18B-208ENST00000472267 GTF3C3Q9Y5Q9 886 aa14.34□□□□□ -0.11
MRPS18B-208ENST00000472267 ESCO1Q5FWF5 840 aa14.33□□□□□ -0.11
MRPS18B-208ENST00000472267 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.11
MRPS18B-208ENST00000472267 INSRP06213 1382 aa14.33□□□□□ -0.11
MRPS18B-208ENST00000472267 MAP2P11137 1827 aaKnown RBP14.33□□□□□ -0.12
MRPS18B-208ENST00000472267 SHPRHQ149N8 1683 aa14.33□□□□□ -0.12
MRPS18B-208ENST00000472267 PPM1GO15355 546 aaPredicted RBP14.33□□□□□ -0.12
MRPS18B-208ENST00000472267 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
MRPS18B-208ENST00000472267 TMEM94Q12767 1356 aa14.33□□□□□ -0.12
MRPS18B-208ENST00000472267 C19orf44Q9H6X5 657 aa14.32□□□□□ -0.12
MRPS18B-208ENST00000472267 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
MRPS18B-208ENST00000472267 TTC21AQ8NDW8 1320 aa14.31□□□□□ -0.12
MRPS18B-208ENST00000472267 SSH2Q76I76 1423 aa14.31□□□□□ -0.12
MRPS18B-208ENST00000472267 PAK3O75914 559 aaPredicted RBP14.3□□□□□ -0.12
MRPS18B-208ENST00000472267 ATF3P18847 181 aa14.3□□□□□ -0.12
MRPS18B-208ENST00000472267 ORAI2Q96SN7 254 aa14.3□□□□□ -0.12
MRPS18B-208ENST00000472267 POLKQ9UBT6 870 aa14.3□□□□□ -0.12
MRPS18B-208ENST00000472267 EMILIN1Q9Y6C2 1016 aa14.29□□□□□ -0.12
MRPS18B-208ENST00000472267 ZNF335Q9H4Z2 1342 aaPredicted RBP14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 SOX12O15370 315 aa14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 U2AF1L5P0DN76 240 aaPredicted RBP14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 U2AF1Q01081 240 aaKnown RBP eCLIP14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 PSME1Q06323 249 aa14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 RRS1Q15050 365 aaKnown RBP14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 NUDCQ9Y266 331 aa14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 OVOS2A0A0J9YW53 1432 aa14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 OVOS2Q6IE36 1432 aa14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 COL3A1P02461 1466 aaPredicted RBP14.28□□□□□ -0.12
MRPS18B-208ENST00000472267 NUTM2GQ5VZR2 741 aa14.27□□□□□ -0.12
MRPS18B-208ENST00000472267 PIK3C2AO00443 1686 aa14.27□□□□□ -0.13
MRPS18B-208ENST00000472267 AATKQ6ZMQ8 1374 aa14.27□□□□□ -0.13
MRPS18B-208ENST00000472267 NCOA3Q9Y6Q9 1424 aa14.27□□□□□ -0.13
MRPS18B-208ENST00000472267 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
MRPS18B-208ENST00000472267 C1orf167Q5SNV9 1468 aa14.26□□□□□ -0.13
MRPS18B-208ENST00000472267 XIRP1Q702N8 1843 aaKnown RBP14.26□□□□□ -0.13
MRPS18B-208ENST00000472267 APAF1O14727 1248 aa14.26□□□□□ -0.13
MRPS18B-208ENST00000472267 NLRP6P59044 892 aa14.26□□□□□ -0.13
MRPS18B-208ENST00000472267 ABTB2Q8N961 1025 aa14.26□□□□□ -0.13
MRPS18B-208ENST00000472267 MSH6P52701 1360 aa14.25□□□□□ -0.13
MRPS18B-208ENST00000472267 FOXO3O43524 673 aa14.25□□□□□ -0.13
MRPS18B-208ENST00000472267 XPCQ01831 940 aaPredicted RBP14.25□□□□□ -0.13
MRPS18B-208ENST00000472267 PNPLA6Q8IY17 1366 aa14.25□□□□□ -0.13
MRPS18B-208ENST00000472267 RUNDC1Q96C34 613 aa14.24□□□□□ -0.13
MRPS18B-208ENST00000472267 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
MRPS18B-208ENST00000472267 USP31Q70CQ4 1352 aa14.24□□□□□ -0.13
MRPS18B-208ENST00000472267 DCCP43146 1447 aa14.24□□□□□ -0.13
MRPS18B-208ENST00000472267 MST1RQ04912 1400 aa14.24□□□□□ -0.13
MRPS18B-208ENST00000472267 SMG6Q86US8 1419 aaKnown RBP14.24□□□□□ -0.13
MRPS18B-208ENST00000472267 LRRC7Q96NW7 1537 aa14.24□□□□□ -0.13
MRPS18B-208ENST00000472267 CADPS2Q86UW7 1296 aa14.23□□□□□ -0.13
MRPS18B-208ENST00000472267 CDK12Q9NYV4 1490 aaPredicted RBP14.23□□□□□ -0.13
MRPS18B-208ENST00000472267 KIF1AQ12756 1690 aa14.23□□□□□ -0.13
MRPS18B-208ENST00000472267 PDE3BQ13370 1112 aa14.21□□□□□ -0.13
MRPS18B-208ENST00000472267 KRT28Q7Z3Y7 464 aa14.21□□□□□ -0.13
MRPS18B-208ENST00000472267 CDCA7LQ96GN5 454 aa14.21□□□□□ -0.13
MRPS18B-208ENST00000472267 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.13
MRPS18B-208ENST00000472267 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.13
MRPS18B-208ENST00000472267 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
MRPS18B-208ENST00000472267 NEUROD2Q15784 382 aa14.2□□□□□ -0.14
MRPS18B-208ENST00000472267 LMOD2Q6P5Q4 547 aa14.2□□□□□ -0.14
MRPS18B-208ENST00000472267 RRP7AQ9Y3A4 280 aaKnown RBP14.2□□□□□ -0.14
MRPS18B-208ENST00000472267 IL13P35225 146 aa14.19□□□□□ -0.14
MRPS18B-208ENST00000472267 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
MRPS18B-208ENST00000472267 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
MRPS18B-208ENST00000472267 USP54Q70EL1 1684 aa14.19□□□□□ -0.14
MRPS18B-208ENST00000472267 MAP3K19Q56UN5 1328 aa14.19□□□□□ -0.14
MRPS18B-208ENST00000472267 AMPHP49418 695 aa14.19□□□□□ -0.14
MRPS18B-208ENST00000472267 DDX17Q92841 729 aaKnown RBP14.19□□□□□ -0.14
MRPS18B-208ENST00000472267 MAPK8IP3Q9UPT6 1336 aa14.18□□□□□ -0.14
MRPS18B-208ENST00000472267 NEFLP07196 543 aa14.18□□□□□ -0.14
MRPS18B-208ENST00000472267 HMOX1P09601 288 aa14.18□□□□□ -0.14
MRPS18B-208ENST00000472267 HSP90AB2PQ58FF8 381 aa14.17□□□□□ -0.14
MRPS18B-208ENST00000472267 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
MRPS18B-208ENST00000472267 IQSEC2Q5JU85 1478 aa14.17□□□□□ -0.14
MRPS18B-208ENST00000472267 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
MRPS18B-208ENST00000472267 ZNF521Q96K83 1311 aa14.16□□□□□ -0.14
MRPS18B-208ENST00000472267 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
MRPS18B-208ENST00000472267 EIF4A2Q14240 407 aaKnown RBP14.16□□□□□ -0.14
MRPS18B-208ENST00000472267 NGEFQ8N5V2 710 aa14.16□□□□□ -0.14
MRPS18B-208ENST00000472267 PLEKHF1Q96S99 279 aa14.16□□□□□ -0.14
MRPS18B-208ENST00000472267 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
MRPS18B-208ENST00000472267 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
MRPS18B-208ENST00000472267 FCHSD2O94868 740 aa14.15□□□□□ -0.14
MRPS18B-208ENST00000472267 FKBP8Q14318 412 aa14.15□□□□□ -0.14
MRPS18B-208ENST00000472267 PRKAR2BP31323 418 aa14.15□□□□□ -0.14
MRPS18B-208ENST00000472267 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
MRPS18B-208ENST00000472267 FLT4P35916 1363 aa14.14□□□□□ -0.15
MRPS18B-208ENST00000472267 NPHP3Q7Z494 1330 aa14.14□□□□□ -0.15
MRPS18B-208ENST00000472267 NEFMP07197 916 aa14.14□□□□□ -0.15
MRPS18B-208ENST00000472267 WWC1Q8IX03 1113 aa14.14□□□□□ -0.15
MRPS18B-208ENST00000472267 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms